Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05149 and BL03456
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:16
# Commandline: needle
# -asequence dna-align/BSNT_05149___yvfV.1.5803.seq
# -bsequence dna-align/BL03456___yvfV.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05149___yvfV-BL03456___yvfV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05149___yvfV-BL03456___yvfV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05149___yvfV
# 2: BL03456___yvfV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 726
# Identity: 566/726 (78.0%)
# Similarity: 566/726 (78.0%)
# Gaps: 18/726 ( 2.5%)
# Score: 2177.0
#
#
#=======================================
BSNT_05149___ 1 ATGAAAGTCTCACTTTTTGTCACTTGTCTTGTTGATATGTTTCAAACAAA 50
||||||||.|||||.|||.||||.|||.|.|||||.||||||||..||||
BL03456___yvf 1 ATGAAAGTATCACTGTTTATCACGTGTTTGGTTGACATGTTTCAGTCAAA 50
BSNT_05149___ 51 TGTCGGAAAAGCAACGGTTGAGCTGCTGGAGCGGCTTGGGTGCGAGGTTG 100
||||||||||||.||.|||||.||||||||||||||.||.||.||.||.|
BL03456___yvf 51 TGTCGGAAAAGCGACTGTTGAACTGCTGGAGCGGCTCGGATGTGAAGTGG 100
BSNT_05149___ 101 ATTTTCCAGAAGGGCAGATTTGCTGCGGACAGCCGGCTTACAACAGCGGC 150
|||||||.|||||||||||.||||||||.|||||.||.||||||||||||
BL03456___yvf 101 ATTTTCCCGAAGGGCAGATCTGCTGCGGCCAGCCTGCGTACAACAGCGGC 150
BSNT_05149___ 151 TATGTACATGACGCCAAAAAAGCAATGAAACGGATGATCGAAACGTT--- 197
|||||..|.||..||||||||||.||||.|||||||||.||.|||||
BL03456___yvf 151 TATGTCAAAGATTCCAAAAAAGCGATGAGACGGATGATTGAGACGTTTGA 200
BSNT_05149___ 198 -TCAGGATTCCGAATATGTTGTCAGTCCTTCGGGTTCCTGCACAACGATG 246
|||| |.|||||.||.|||||.|||||.||.||.|||.|....|||
BL03456___yvf 201 ATCAG----CTGAATACGTCGTCAGCCCTTCAGGATCGTGCGCTTTTATG 246
BSNT_05149___ 247 TTCCGGGAGTATCCGCACCTGTTTCAGGATGATCCGAAATGGGCCGATAA 296
|||...|||||.||||||||.||.|.||||||.|||...|||||.||.||
BL03456___yvf 247 TTCAAAGAGTACCCGCACCTTTTCCGGGATGAACCGGCCTGGGCGGAAAA 296
BSNT_05149___ 297 AGCGCAAAAGCTGGCGGATAAAACGTATGAACTGACAGATTTTATTGTGA 346
||||||...||||||.||.|||||||||||.|||||.||||||||.||.|
BL03456___yvf 297 AGCGCAGCGGCTGGCTGACAAAACGTATGAGCTGACCGATTTTATCGTCA 346
BSNT_05149___ 347 ACGTCCTTG-GGGTAGAGGATGTCGGCGCGACCCTTCATACAAAAGCGAC 395
|||| .||| .|.|.|||||.|||||.|||||.||..|.|.|||.||||
BL03456___yvf 347 ACGT-ATTGAAGATTGAGGACGTCGGGGCGACACTCGAGAAAAAGGCGA- 394
BSNT_05149___ 396 CTTA-CATACGTCGTGCCATATGACTAGGCTGCTGGGTGTTCGGGAGGAG 444
|||| ||||||||.|||||||||||.|||||..||||.||...|||.|.|
BL03456___yvf 395 CTTATCATACGTCATGCCATATGACAAGGCTTTTGGGAGTCACGGACGCG 444
BSNT_05149___ 445 CCGATGAAGCTGTTGAGCCATGTGAAGGGCCTGCAGTTTACAGAGCTTCC 494
||||||||||||.|..|.|||||||||||.|||.||||.||...|||.||
BL03456___yvf 445 CCGATGAAGCTGCTTCGGCATGTGAAGGGACTGGAGTTCACGCCGCTGCC 494
BSNT_05149___ 495 GGGCAAACATAACTGCTGCGGATTCGGAGGAACGTTCTCCGTCAAGATGG 544
|.|||||||..||||||||||||||||.||.||.|||||.||.||||||.
BL03456___yvf 495 GCGCAAACACGACTGCTGCGGATTCGGGGGCACTTTCTCGGTGAAGATGT 544
BSNT_05149___ 545 CGCAGATTTCTGAGCAGATGGTCGATGAAAAAGTCGAATGTGTGGAGGAA 594
||||.||.||.||.||||||||||||||.|||||.|..|||||.||.|||
BL03456___yvf 545 CGCAAATATCCGAACAGATGGTCGATGAGAAAGTGGCGTGTGTCGAAGAA 594
BSNT_05149___ 595 ACGGGAGCAGAGGTGCTGATCGGTGCTGACTGCGGCTGTTTGATGAATAT 644
||.|..||.||.|||.|.|||||.||.|||||||||||.|||||||||||
BL03456___yvf 595 ACAGCCGCCGACGTGTTAATCGGGGCGGACTGCGGCTGCTTGATGAATAT 644
BSNT_05149___ 645 CGGGGGACGGCTTGACCGAAAAGATAA---GAATGTCAAAGTGATGCACA 691
|||.||.|||.|.|...||||..|.|| ||.|| ||||.|||||.|
BL03456___yvf 645 CGGCGGGCGGATCGGGAGAAAGAACAAGCCGATTG---AAGTCATGCATA 691
BSNT_05149___ 692 TCGCCGAAGTGCTCAACAGCAGATAA 717
||||.||||||||.||||||||||||
BL03456___yvf 692 TCGCAGAAGTGCTGAACAGCAGATAA 717
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