Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05174 and BL03452
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:18
# Commandline: needle
# -asequence dna-align/BSNT_05174___yvfE.1.5803.seq
# -bsequence dna-align/BL03452___yvfE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05174___yvfE-BL03452___yvfE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05174___yvfE-BL03452___yvfE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05174___yvfE
# 2: BL03452___yvfE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1234
# Identity: 807/1234 (65.4%)
# Similarity: 807/1234 (65.4%)
# Gaps: 155/1234 (12.6%)
# Score: 2470.5
#
#
#=======================================
BSNT_05174___ 1 ATG---CATAAAAA---AATCTACTTATCTCCCCCTCATATGAGCGGCAG 44
||| ||.||.|| |||.||.|||||.||.||.||.|||||||| ||
BL03452___yvf 1 ATGAGTCAGAATAAGCGAATTTATTTATCACCGCCGCACATGAGCGG-AG 49
BSNT_05174___ 45 -GGAGCAGCACTATATTTCAGAAGCCTTTCGCTCAAACTGGATCGCGCCG 93
.|||.|||.||||.|..|.|||||.|||||..||||||||||||||||.
BL03452___yvf 50 ACGAGGAGCGCTATGTAGCCGAAGCGTTTCGGACAAACTGGATCGCGCCC 99
BSNT_05174___ 94 CTTGGGCCGCTCGTGAATTCATTTGAAGAACAGCTGGCAGAACGAGTCGG 143
||.||.||.||.||..|..|||||||||||.||||.||.| .|.|..|||
BL03452___yvf 100 CTCGGTCCCCTTGTCGACACATTTGAAGAAAAGCTTGCCG-CCTATGCGG 148
BSNT_05174___ 144 TGTAAAA-----GCAGCCGCTGCGGTCGGCTCAGGAACGGCGGCGATTCA 188
.| | |.||||||.||.|||.||||||||||.||.|||||.||
BL03452___yvf 149 GG----ACGTCCGGAGCCGCGGCAGTCAGCTCAGGAACAGCTGCGATCCA 194
BSNT_05174___ 189 TCTCGCCCTGCGTTTGCTTG----AGGTAAAAGAAGGTGACAGCGTGTTT 234
.||.|||.||...|||||.| .||.| ||||.||.|..||.||.
BL03452___yvf 195 CCTGGCCTTGAAATTGCTCGGCGTCGGCA----AAGGCGATACGGTCTTC 240
BSNT_05174___ 235 TGCCAGTCCTTCACATTTGTAGCAACCGCCAATCCGATTTTATATGAAAA 284
|||...||.||.||.||||||||.|.||||||||||||..|||||||..|
BL03452___yvf 241 TGCTCTTCTTTTACGTTTGTAGCGAGCGCCAATCCGATCATATATGAGCA 290
BSNT_05174___ 285 AGCGGTGCCCGTCTTTATTGATTCTGAGCCTGATACGTGGAATATGTCG- 333
.||.|..||.||.||.|||||||||||.|..|||||.|||||.||||||
BL03452___yvf 291 GGCTGAACCGGTTTTCATTGATTCTGAACGGGATACATGGAACATGTCGC 340
BSNT_05174___ 334 CCGACAGCCCTTGAAAGAGCATTGGAGGAAGCGAAAAGAAACGGAACA-- 381
|||| .||.||||||.|.||..|.||.||||| |.|.|||..||
BL03452___yvf 341 CCGA-GGCGCTTGAACGGGCGCTTGACGAAGC-----GGAGCGGGCCAGG 384
BSNT_05174___ 382 ---CTGCCAAAAGCGGTTATTGCCGTCAATCTATATGGGCAGAGCGCGAA 428
||.||.|||||.||.||.|.||||||..|.||.||.||.||||||||
BL03452___yvf 385 AATCTCCCGAAAGCCGTCATCGTCGTCAACTTGTACGGCCAAAGCGCGAA 434
BSNT_05174___ 429 AATGGATGAAATCGTAAG--CCTGTGCGATGCATACGGAGTTCCTGTCAT 476
||||||.||.|| ||.| |.|.||||||..||..|..||.||||||||
BL03452___yvf 435 AATGGACGAGAT--TATGGCCATTTGCGATCGATTTGCCGTGCCTGTCAT 482
BSNT_05174___ 477 TGAGGACGCAGCCGAATCTCTCGGAACAGTCTATAAAGG--GAAGCAAAG 524
|||.||.|||||||||||.|||||..|.||.|||||||| ||| ||||
BL03452___yvf 483 TGAAGATGCAGCCGAATCGCTCGGTTCTGTTTATAAAGGCAGAA--AAAG 530
BSNT_05174___ 525 CGGAACATTCGGGCGCTTCGGCATTTTTTCATTTAACGGGAACAAAATCA 574
|||.||.|||||.|||||||||||||.|||.||.|||||.||||||||||
BL03452___yvf 531 CGGGACCTTCGGACGCTTCGGCATTTATTCGTTCAACGGTAACAAAATCA 580
BSNT_05174___ 575 TTACCACATCAGGGGGAGGGATGCTCGTTTCA--AATGATGAAGCCGCAA 622
|.||||||||.||.|||||.|||||.| ||| .|||||||||.||| .
BL03452___yvf 581 TCACCACATCGGGCGGAGGAATGCTGG--TCAGCGATGATGAAGACGC-G 627
BSNT_05174___ 623 TTGAA-AAAGCAAGATTTCTCGCTTCGCAGGCACGAGAACCGGCTGTTCA 671
||||| ||.||..|.|||.|.||..|.|||||.||.||.||.||..||||
BL03452___yvf 628 TTGAAGAAGGCGCGCTTTTTAGCCACTCAGGCGCGCGAGCCAGCCATTCA 677
BSNT_05174___ 672 TTATCAGCACAGTCAAATTGGAC-ATAATTACAGGCTGAGCAATATCTTA 720
|||||||||| |..|||..||.| |.||||||.||.||||||||.|..|.
BL03452___yvf 678 TTATCAGCAC-GAAAAAGCGGGCTACAATTACCGGATGAGCAATGTTCTG 726
BSNT_05174___ 721 GCCGGCGTCGGCATTGCCCAGCTTGAGGTGCTGGATGAGCGAGTGGAGAC 770
|||||..|||||||.||.|||||.|..||.||||||||.||.|| ||
BL03452___yvf 727 GCCGGAATCGGCATCGCACAGCTCGCCGTTCTGGATGACCGGGT----AC 772
BSNT_05174___ 771 A----AGAAGGACCATTTTCACGAGATACAAAAATGCGCT---CGGTCAC 813
| |||.||.|..|||||..|.|.||.||..|.||||| ||||
BL03452___yvf 773 ATGCCAGACGGGCGGTTTTCGAGCGCTATAAGGAGGCGCTTTCCGGT--- 819
BSNT_05174___ 814 ATAGACGGCGTCCGCTTTATGCCGGAGTACGCAGCAGGCGTATCCAATCG 863
||.||.||..|....||.|||||.||| ||.|||.|.||.||.||
BL03452___yvf 820 ATCGAAGGTATAGAATTCATGCCTGAG------GCCGGCATGTCAAACCG 863
BSNT_05174___ 864 CTGGCTCACCACGCTCACACTTGA-TAACG---GGCTCAGCCCATAT--- 906
|||||||||.|| | ||||| |.|.||||..|.||
BL03452___yvf 864 CTGGCTCACGAC-----------ATTAACGTTAGACACAGCAAAGATTCA 902
BSNT_05174___ 907 -------------GACGTAGTTCAACGTCTTGCTGAAGAAAACATTGAAG 943
|||.|..|..|||..||.||..|.|||||||||||.|
BL03452___yvf 903 AACAACACCGGCGGACATCATCGAACAGCTCGCAAATGAAAACATTGAGG 952
BSNT_05174___ 944 CCCGTCCGCTGTGGAAGCCGCTCCATACCCAGCCGCTATT------CGAT 987
||||.|||.|.||||||||..|.||.|..|||||.||.|| ||
BL03452___yvf 953 CCCGCCCGTTATGGAAGCCTTTGCACAGACAGCCCCTTTTTAAAGGCG-- 1000
BSNT_05174___ 988 CCGGCTTTATTTTATTCTCATGAAGATACAGGAAGC---GTATGCGAAGA 1034
|||| .||||||.|.||.||.|| .|||| || ||.|||...||
BL03452___yvf 1001 -CGGC---CTTTTATCCGCACGATGA-CCAGG--GCTCTGTCTGCTGCGA 1043
BSNT_05174___ 1035 TTTGTTCAAGCGAGGAATCTGTCTCCCATCGGGGTCCAATATGAC-AGAA 1083
.||.||..||||.||..||||.||.||.||.||.||.|.|||||| .|||
BL03452___yvf 1044 CTTATTTCAGCGCGGGCTCTGCCTGCCGTCAGGATCAAGTATGACGCGAA 1093
BSNT_05174___ 1084 GATGAGCAAGACCGGGTCATTGAAGTGCTACTGCGCTTATTCCAAACTGC 1133
|.|||||.||||||||.|||.||.|..| |||
BL03452___yvf 1094 -AAGAGCAGGACCGGGTAATTCAAATCGT------------------TGC 1124
BSNT_05174___ 1134 CGAGGTGAAGAAATGGACAGCAAGCATTCGATGA 1167
|||...||..|||| .|..||||
BL03452___yvf 1125 CGACCGGATTAAAT------------ATAAATGA 1146
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