Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05177 and BL03450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:18
# Commandline: needle
# -asequence dna-align/BSNT_05177___yvfC.1.5803.seq
# -bsequence dna-align/BL03450___yvfC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05177___yvfC-BL03450___yvfC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05177___yvfC-BL03450___yvfC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05177___yvfC
# 2: BL03450___yvfC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 652
# Identity: 431/652 (66.1%)
# Similarity: 431/652 (66.1%)
# Gaps: 92/652 (14.1%)
# Score: 1301.5
#
#
#=======================================
BSNT_05177___ 1 TTGATCCT---GAAACGACTTTTTGATC-TGACGGCCGCCATTTT--TTT 44
.|.|| ||||||..||||.|||| || ||||.| .||
BL03450___yvf 1 ---GTGCTAGCGAAACGGTTTTTCGATCTTG--------CATTGTCAGTT 39
BSNT_05177___ 45 GTTGTGCTGTACAAGT-GTGATCATTCTGTTCACCAT-----CGCCGTTG 88
.||.||||| || |.|.|||.||.|..||..|| ||.| |||
BL03450___yvf 40 ATTTTGCTG-----GTCGCGCTCAGTCCGGCCATGATTCTGACGGC-TTG 83
BSNT_05177___ 89 -----TCAGGCTGAAAATAGGATCACCTGTCTTCTTT----AAGCAAGTA 129
||||...||||||.||.||.|||||.||.||| ||.|..||
BL03450___yvf 84 TCTCATCAGATGGAAAATCGGCTCGCCTGTTTTATTTCGCCAAACCCGT- 132
BSNT_05177___ 130 AGGCCGGGCCTGCACGGCAAACCGTTCACCCTATATAAGTTCCGGACAAT 179
|||||.|||.|.|||.|.||.||.||..|||||||.|||.|.||.||
BL03450___yvf 133 ---CCGGGGCTGAATGGCGAGCCTTTTACATTATATAAATTCAGAACGAT 179
BSNT_05177___ 180 GACGGATGAACGGGACAGTG-AG--GGAAATCTGCTGCCCGATGAAGTCC 226
|||.||||||.|.|| || || ||.||||||||...|||||||...|
BL03450___yvf 180 GACTGATGAAAGAGA---TGCAGCAGGCAATCTGCTAAGCGATGAAAAGC 226
BSNT_05177___ 227 GGCTGACGAAAACGGGCAGGCTGATCAGAAAGCTGAGCATTGATGAGCTT 276
|||||||.||.|||||..|||||||||||||...||||.||||.||..|.
BL03450___yvf 227 GGCTGACAAAGACGGGGCGGCTGATCAGAAAAACGAGCCTTGACGAATTG 276
BSNT_05177___ 277 CCGCAGCTCCTGAATGTCCTGAAGGGCGATCTGAGCCTTGTCGGGCCGCG 326
||||||||..|.||.||..|.||.||.||.||.|||||.|||||||||||
BL03450___yvf 277 CCGCAGCTGATCAACGTTATCAAAGGAGACCTCAGCCTCGTCGGGCCGCG 326
BSNT_05177___ 327 GCCGCTTTTGATGGACTATCTGCCTCTTTATACAGAAAAACAGGCA---- 372
.||||||||||||||.|||.|.||.|||||||| .||..||||
BL03450___yvf 327 CCCGCTTTTGATGGAGTATATCCCCCTTTATAC----GAAGCGGCAGTGG 372
BSNT_05177___ 373 CGGCGCCATGAGGTGAAGCCGGGTATCACAGGCTGGGCGCAAATCAATGG 422
.|.|||||.||.||.||||||||.|||||.|||||||||||.|||||.||
BL03450___yvf 373 AGACGCCACGAAGTCAAGCCGGGCATCACGGGCTGGGCGCAGATCAACGG 422
BSNT_05177___ 423 CAGA---AACGCGATTTCCTGGGAAAAGAAATTTGAATTAGATGTTTGGT 469
.||| ||.|.|| |.|||||..|.|||||||||.|.|||||.||||
BL03450___yvf 423 GAGAAATAAAGTGA---CATGGGAGGAAAAATTTGAACTCGATGTCTGGT 469
BSNT_05177___ 470 ACGTTGACAACCGGTCATTTTTTCTCGATTTGAAAAT--TTTATGTTTGA 517
|.||.||..|.||.||.|||||.||.|||.|.||||| ||| || ||||
BL03450___yvf 470 ATGTGGATCATCGTTCTTTTTTGCTTGATCTCAAAATCCTTT-TG-TTGA 517
BSNT_05177___ 518 CGGTGCG-AAAGGTCCTTGTTTCAGAAG------GGATTCAGCAA--ACC 558
|.|| || |||||| ||| |||| ||..|||||.| |||
BL03450___yvf 518 CTGT-CGTAAAGGT-----TTT--GAAGTCGGAAGGCGTCAGCCAGGACC 559
BSNT_05177___ 559 AATCATGTGACCGCGGAACGGTTTACCGGAAG-CGGAGATGTGTCCTCAT 607
..||||||||.||.|||...|||||.||.|| .||| ||| |||.|
BL03450___yvf 560 -GGCATGTGACAGCAGAAAAATTTACAGGGAGAAGGA-ATG---CCTGA- 603
BSNT_05177___ 608 GA 609
BL03450___yvf 603 -- 603
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