Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05181 and BL03447
See
Amino acid alignment /
Visit
BSNT_05181 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:18
# Commandline: needle
# -asequence dna-align/BSNT_05181___yveT.1.5803.seq
# -bsequence dna-align/BL03447___yveT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05181___yveT-BL03447___yveT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05181___yveT-BL03447___yveT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05181___yveT
# 2: BL03447___yveT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1129
# Identity: 674/1129 (59.7%)
# Similarity: 674/1129 (59.7%)
# Gaps: 209/1129 (18.5%)
# Score: 1778.0
#
#
#=======================================
BSNT_05181___ 1 ATGACCCCGCTCGTCAGCATTATTGTCCCGATGTATCATGTTGAACCATT 50
||||..||..|..||||.||.|||||.||||||||..||||.||| .|||
BL03447___yve 1 ATGAAGCCATTTATCAGTATCATTGTTCCGATGTACAATGTCGAA-GATT 49
BSNT_05181___ 51 -TATAGGGGAGTGCATTGATTCTTTGCTTCGTCAAACGCTTTCTG----A 95
|||||..||.|||.|.|||||..|||...|.||.||| ||| |
BL03447___yve 50 ATATAGAAGAATGCGTCGATTCGCTGCGCAGGCAGACG----CTGAAAAA 95
BSNT_05181___ 96 TATTGAAATCATCCTCGTGAATGACGGAACACCGGATCGTTCAGGCGAAA 145
|||||||||||||||.||..|||||||..|.||.||..|.||.||.||.|
BL03447___yve 96 TATTGAAATCATCCTTGTTGATGACGGCTCTCCCGACAGATCCGGGGAGA 145
BSNT_05181___ 146 TTGCAGAGGATTATGCAAAACG-----------GGATGCGAGAATCCGGG 184
|.|| ||.|||| ||||||.|||.|....|
BL03447___yve 146 TAGC-----------CAGAACGTACTGCAGCCTGGATGCCAGAGTGAAAG 184
BSNT_05181___ 185 TCATTCATCAGGCAAACGGCGGGCTTAGTTCAGCGCGAAATACGGGAATA 234
|.||||||.|...||||||||||||.||.||.|||.|||||.|.||..|.
BL03447___yve 185 TGATTCATAAAAAAAACGGCGGGCTGAGCTCGGCGAGAAATGCCGGTCTT 234
BSNT_05181___ 235 AAGGCCGCG-CGGGGCACTTACATCGGCTTTGTAGACGGAGACGATTATG 283
.|.|||||| |.||..| |||..||||.|||||.|||||.||.||||.||
BL03447___yve 235 CAAGCCGCGACAGGAGA-TTATGTCGGGTTTGTCGACGGTGATGATTTTG 283
BSNT_05181___ 284 TATCATCCGCCATGTTCCAGAGAC-TG------GCTG---AAGAAGCGGA 323
|||...|.||||||||..| |.|| || |||| ||.|||..||
BL03447___yve 284 TATTGCCTGCCATGTTTGA-AAACATGTACGCCGCTGCCAAAAAAGACGA 332
BSNT_05181___ 324 GGAAAATCGGCTCGACATCGTCGGATGCGGTTTTTACAAACAGTC--AT- 370
.|||||.||||||...|||||.|.|.|.|||||.|| ||
BL03447___yve 333 ---------CCTCGATATCGTCATGTGCGGGTATCATAAACATTCCGATA 373
BSNT_05181___ 371 CGGACAGGCGGACATATGTGCCGCCGCAGCTTGAGGCAAACCG------- 413
|||| ||.|| |.||..|.|||||||.||| ||..||||
BL03447___yve 374 CGGA-AGACG--CCTACTTCCCGCCGCCGCT----GCCGACCGATCGCCT 416
BSNT_05181___ 414 CGTGCTGACGAAACCAGAAATGACTGAACG---GCTTAAACATGCTCACG 460
|.||.|| |.|.|..|| |.|.|||| |||.|||.|.||.||||
BL03447___yve 417 CTTGTTG-----AGCTGGGAT-ATTAAACGCGAGCTCAAAAAGGCGCACG 460
BSNT_05181___ 461 AAACGAGATTTATCTGGTATGTATGGCGTTATCTTTACCGCCGTGAGCT- 509
||||..|.||.|||||||||||.|||||..||.|.|||.|.||.||.||
BL03447___yve 461 AAACCCGCTTCATCTGGTATGTGTGGCGGAATTTGTACAGGCGCGACCTG 510
BSNT_05181___ 510 -TTTTGATAGGGCGAATCTGATG---TTTGATGAAGACATCCGTTTTGCC 555
|...||.| ||.|.|.|| |||..|||||||||.||||||||.
BL03447___yve 511 CTGAAGAAA-----AACCAGCTGTACTTTTTTGAAGACATTCGTTTTGCA 555
BSNT_05181___ 556 GAAGACTCTCCCTTCAATTTGTCCGCTTTTTGCGAAGCGGAGCGGGTGAA 605
||.||.||.||.||.|||||||.|||.||||..|.||||.|.||.||||.
BL03447___yve 556 GAGGATTCGCCGTTTAATTTGTACGCCTTTTATGCAGCGAAACGAGTGAG 605
BSNT_05181___ 606 AATGCTTGATGAGGGATTGTACATTTATC--GTGAAAACCCGAACAGCCT 653
|..|.|.|||||.||.|..|||||.|| | ||| .||||||.|||||||
BL03447___yve 606 AGCGATCGATGAAGGCTACTACATGTA-CAGGTG-CAACCCGGACAGCCT 653
BSNT_05181___ 654 GACAGAAATCCCTTATAAACCGGCGATGGATGAACATCTTCAAAA-ACAA 702
||||||....||.|.|||||||...||||||||| |.|.|.|||| .||.
BL03447___yve 654 GACAGAGGCGCCGTTTAAACCGTACATGGATGAA-AGCCTGAAAAGGCAG 702
BSNT_05181___ 703 TATCAAGCTAAAATCGCATTCTACAA------TCACTATGGCTTAGCAGG 746
||.|..||.||||....||||||..| ||| |||| .
BL03447___yve 703 TACCGGGCGAAAAGGAGATTCTATGAGACGTTTCA-----GCTT-----T 742
BSNT_05181___ 747 CGCATGCCAA------GAAGATTTGAATGTGTACATTTGCAGGCACCAGC 790
.|.||| || ||.||||||.|...|||||..||||..||.||..
BL03447___yve 743 TGGATG--AATGTGCGGACGATTTGGAAACGTACACATGCAAACATCAAA 790
BSNT_05181___ 791 TTCCGATGCTTTTGGCAAATGCCTGTGCTTCTCCGAA---TTCGCCGAAA 837
|||||||||||||.||.|||||||||||....||||| ||| |||
BL03447___yve 791 TTCCGATGCTTTTAGCCAATGCCTGTGCGGAACCGAAGCCTTC----AAA 836
BSNT_05181___ 838 G-------------ACATCAAAAAGAAGATCAGACAGATTTTATCCTA-- 872
| ||||.|| |||| |||||.||.||
BL03447___yve 837 GCAGGTGAGGCGGCACATTAA----------AGAC--ATTTTGTCTTACC 874
BSNT_05181___ 873 ------TGACA-TGGTGCGGCA-------GGCTGTCAGACATACACCGTT 908
|| || |.|||||.|| |.||.||.| || ||||
BL03447___yve 875 GGATGGTG-CAGTCGTGCGTCAAAGCCACGTCTCTCCG-CA---ACCG-- 917
BSNT_05181___ 909 TGAGAAATTATTAAGAGGAGAGCGCTTGGTATTAGCACTGTGTAAATGGC 958
.||..|.||||..||..||||..|.||.|||...||.||.||
BL03447___yve 918 ---CAACCTGTTAATCGGCCAGCGGCTCGTTTTATTGCTATGCAA----- 959
BSNT_05181___ 959 GGCTCA------CTTTTCTCATCAAGCTGTTTTTCGAGCATCGGGGGAT- 1001
|||.| |..||||..||.|..||||||| |
BL03447___yve 960 -GCTGAATATTCCGATTCTGCTCGAATTGTTTTT--------------TA 994
BSNT_05181___ 1002 AATGAAAGGCAGTGCGAAGCAA-GCATGA 1029
||.|||| ..|||..||.|| |.||||
BL03447___yve 995 AACGAAA---TCTGCCCAGTAAGGGATGA 1020
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.