Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05185 and BL03444
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:18
# Commandline: needle
# -asequence dna-align/BSNT_05185___yveQ.1.5803.seq
# -bsequence dna-align/BL03444___yveQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05185___yveQ-BL03444___yveQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05185___yveQ-BL03444___yveQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05185___yveQ
# 2: BL03444___yveQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1167
# Identity: 789/1167 (67.6%)
# Similarity: 789/1167 (67.6%)
# Gaps: 126/1167 (10.8%)
# Score: 2541.5
#
#
#=======================================
BSNT_05185___ 1 ATGATTGTATATGCC--GTT-AATATGGGGATTGTATTTATTTGGTCTTG 47
|||..|||.|| | ||| ||||||||||||||.||..|.|||||.||
BL03444___yve 1 ATGGCTGTCTA---CATGTTGAATATGGGGATTGTTTTCGTCTGGTCATG 47
BSNT_05185___ 48 GTTCGCTAAAATGTGCGGC-GGCCGTGACGATTC----GCTTGCC-ACGG 91
|||.||.|||||||.|||| || ||.|| || || |||| ||||
BL03444___yve 48 GTTTGCGAAAATGTACGGCAGG----GAAGA-TCACAGGC-TGCCGACGG 91
BSNT_05185___ 92 GGTATCGGCCGAATAAGCTTTTGATC-------TGGATTCCGCTCGCTTC 134
|.||.||.|||||| || |||| |.| ||||||||||.||
BL03444___yve 92 GCTACCGTCCGAAT--GC----GATCCTCACCGTCG-TTCCGCTCGCGTC 134
BSNT_05185___ 135 ACTTG-TGCTCGTGTCAGGTCTCCGCTATCGA-GTCGGCACGGATTTTCA 182
.||| |..||||..|.||..|..|.|| |.| |||||.|||||||..||
BL03444___yve 135 -TTTGATTATCGTTGCCGGCTTAAGATA-CAAGGTCGGAACGGATTACCA 182
BSNT_05185___ 183 GACGTACACGCTGCTGTACGAATTGGCGGGCGATTATCAAAAT------- 225
.||.||.|.||||||.||||||||.||.|| |||||
BL03444___yve 183 CACATATATGCTGCTTTACGAATTAGCCGG--------AAAATACAACAG 224
BSNT_05185___ 226 -GTGTGGCAGATATTCGGTTTCGGCACAGCGAAAACAGCGACAGATCCGG 274
.|.|||.||||||||||||||||.||||..||..|..||||.||.||||
BL03444___yve 225 CATTTGGGAGATATTCGGTTTCGGAACAGGCAAGTCGTCGACGGACCCGG 274
BSNT_05185___ 275 GGTTTACCGCATTCCTTTGGCTGATGA-----ATTTCATCACGGAAGATC 319
|.|||||||||.||.|.|||.|..|.| |||||| |..||||
BL03444___yve 275 GATTTACCGCACTCTTATGGATTTTAAATCAGATTTCA-----GCCGATC 319
BSNT_05185___ 320 CTCAAATCATGTATTTTACGGTGGCGGTCG---TGACCTACAGCTTTATT 366
|.....||||| |||.|.||.|..|.|| |.|||||.|.||.||||
BL03444___yve 320 CGGCGCTCATG---TTTGCCGTCGTTGCCGCGATTACCTATATCTATATT 366
BSNT_05185___ 367 ATGAAGACACTCGCCGACTATGGCAGGCCGTTTGAGCTGAGTGTCTTTTT 416
.|.|||||.||....|..|||||.|||||||||||..||||..|.|||.|
BL03444___yve 367 GTCAAGACGCTTTATGTGTATGGAAGGCCGTTTGAATTGAGCATGTTTCT 416
BSNT_05185___ 417 GTTTTTGGGAACCTTTCATTACTACGCGTCTTTTAACGGCATCAGGCAAT 466
||||.|.||.|..|||||.||.||.||.||.|||||||||||..|.||||
BL03444___yve 417 GTTTATCGGCATGTTTCACTATTATGCTTCGTTTAACGGCATTCGCCAAT 466
BSNT_05185___ 467 ACATGGTGGCAGCTGTTTTGTTTTGGGCGGTCCGTTATATCATCAGCGGG 516
||||||.|||.||..||.|||||||||||||.||.|||.|.|||...|||
BL03444___yve 467 ACATGGCGGCGGCCATTCTGTTTTGGGCGGTGCGGTATCTGATCGATGGG 516
BSNT_05185___ 517 AA-CTGGAAGCGATATTTCCTGATTGTGCTGGTCAGCTCGCTCTTTCATT 565
|| |||| .|||.|||.|..|..||||.|||.||.|.|||||.|||||||
BL03444___yve 517 AAGCTGG-TGCGCTATATGATCGTTGTACTGATCTGTTCGCTTTTTCATT 565
BSNT_05185___ 566 CGTCGGCGCTGATTATGATTCCGGTGTACTTTATTGTCAGAAGAAAAGCC 615
|.|||||..||||.|||||||||||.||.||.||.||||||||||||||.
BL03444___yve 566 CTTCGGCATTGATCATGATTCCGGTTTATTTCATCGTCAGAAGAAAAGCG 615
BSNT_05185___ 616 TGGTCTCCGGCGATATTCGGCCTATCCGCT-----TTGTTTCTCGGCAT- 659
||||| ||||.|||.|| .||.|.||||.|.|
BL03444___yve 616 TGGTC--------------GCCTGTCCTCTGGTGCCTGATGCTCGTCTTT 651
BSNT_05185___ 660 --------GACATTTTTATATCAAAAATTTATTTCTGTGTTTGTCGTTGT 701
|||.|||.|.||||||||||||.|.||.||.||..|.||.||
BL03444___yve 652 TTGGCGGGGACTTTTCTGTATCAAAAATTTCTGTCCGTATTCCTAGTCGT 701
BSNT_05185___ 702 ACTTGAAAACAGCTC-ATACAGCCATTATGAAAAATGGCTCATGACGAAC 750
.||||||||||| || ||||.|.|||||||||.|||||||.||||.|||.
BL03444___yve 702 GCTTGAAAACAG-TCAATACGGACATTATGAAGAATGGCTGATGAAGAAT 750
BSNT_05185___ 751 ACAAATGGAATGAATGTGATCAAAATCGCTGTGTTGGTTCTGCCGCTGTT 800
|||||.||.|||||.||.||.||||||...||..|..||||.|||||...
BL03444___yve 751 ACAAACGGCATGAACGTTATTAAAATCATCGTTCTTCTTCTCCCGCTCGC 800
BSNT_05185___ 801 CCTTGCATTTTGCTATAAAGAACGACTGCGGAGTCTGTGGCCGCAAATTG 850
.|||||.|||||||..|..||.|..||..|.|..|..|||||..||.|.|
BL03444___yve 801 ACTTGCCTTTTGCTTCAGGGAGCAGCTCAGAAAGCGCTGGCCCGAAGTCG 850
BSNT_05185___ 851 ATATTGTCGTCAA--TTTGTGCCTGCTAGGTTTTTTGTTCGGCCTTTTGG 898
||..|.||||.|| ||||| |||.|.|||||..|||||||..||||||
BL03444___yve 851 ATTATATCGTAAACCTTTGT--CTGATCGGTTTCCTGTTCGGAATTTTGG 898
BSNT_05185___ 899 CCACAAAGGACGTGATTTTTGCCAGATTCAATATTTATTTCGGTCTGTAT 948
|.||||||||.||.||||||||.||.|||||.|||||||||||.||.|||
BL03444___yve 899 CGACAAAGGATGTCATTTTTGCGAGGTTCAACATTTATTTCGGGCTCTAT 948
BSNT_05185___ 949 CAAATGATCCTAGTCCCTTATTTCGTCAGGATATTTGATGAAAAATCGAA 998
||..||||.||.||.||||||||.||..||||.|||||....|||||.||
BL03444___yve 949 CAGCTGATTCTCGTTCCTTATTTTGTACGGATTTTTGAACCGAAATCAAA 998
BSNT_05185___ 999 CGCTCTTATCTATATCGCTATCGTTGTTTGTTATT----------TTCTT 1038
|||.|||.|.|||.| ||||.|.|| |||||
BL03444___yve 999 CGCGCTTCTTTATGT-----------TTTGATTTTGATCTGTTACTTCTT 1037
BSNT_05185___ 1039 -TACAGTTATTTGCTTATGCCGGTCGATTCATCGGTTCTGCCTTACAGAA 1087
|||||.|.|.||||.||||||.||||.||.|||||..||||.|||||||
BL03444___yve 1038 ATACAGCTTTATGCTCATGCCGTTCGACTCGTCGGTATTGCCGTACAGAA 1087
BSNT_05185___ 1088 CGATTTTTTCCCGGTAA 1104
||||||||...||.|.|
BL03444___yve 1088 CGATTTTTGAACGTTGA 1104
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