Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05290 and BL03421

See Amino acid alignment / Visit BSNT_05290 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence dna-align/BSNT_05290___crh.1.5803.seq
#    -bsequence dna-align/BL03421___crh.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05290___crh-BL03421___crh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05290___crh-BL03421___crh.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05290___crh
# 2: BL03421___crh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     202/271 (74.5%)
# Similarity:   202/271 (74.5%)
# Gaps:          14/271 ( 5.2%)
# Score: 746.0
# 
#
#=======================================

BSNT_05290___      1 ATGGTTCAACAGAAAGTGGAAGTTCGATTAAAGACAGGACTGCAAGCACG     50
                     |||||||||||.|||||||||||||..|||||.|||||.||.|||||.||
BL03421___crh      1 ATGGTTCAACAAAAAGTGGAAGTTCTTTTAAAAACAGGGCTTCAAGCGCG     50

BSNT_05290___     51 TCCTGCTGCTTTGTTTGTACAAGAAGCAAACCGGTTTACGTCAGATGTGT    100
                     .||.||.||.||||||||.||||||||.|||||.|||...||||||.|.|
BL03421___crh     51 CCCAGCGGCATTGTTTGTTCAAGAAGCCAACCGTTTTCAATCAGATATTT    100

BSNT_05290___    101 TTCTTGAGAAGGATGGGAAAAAAGTAAACGCCAAAAGCATCATGGGGCTG    150
                     ||||.||.||||..|..||||||||.||.|||||||||||||||||||||
BL03421___crh    101 TTCTGGAAAAGGGAGATAAAAAAGTGAATGCCAAAAGCATCATGGGGCTG    150

BSNT_05290___    151 ATGAGCCTGGCGGTAAGCACAGGCACTGAGGTTACCTTGATTGCCCAGGG    200
                     ||||||||.||.||.|||.|.||..|.||.||.||..||||.||..|.||
BL03421___crh    151 ATGAGCCTTGCTGTCAGCTCCGGATCGGAAGTCACGCTGATCGCTGACGG    200

BSNT_05290___    201 AGAAGATGAACAAGAGGCGCTGGA-GAAGCTGGCAGCTTACGTTCAAG--    247
                     |...|||||||||||.||.||.|| |.| |||.|.||.||.|||||||  
BL03421___crh    201 ATCCGATGAACAAGATGCCCTTGATGCA-CTGACTGCATATGTTCAAGAG    249

BSNT_05290___    248 -AAGAAG-------TTTAG--    258
                      ||||||       ||||.  
BL03421___crh    250 AAAGAAGCTAAACCTTTATGA    270


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