Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05292 and BL03419

See Amino acid alignment / Visit BSNT_05292 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence dna-align/BSNT_05292___yvcK.1.5803.seq
#    -bsequence dna-align/BL03419___yvcK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05292___yvcK-BL03419___yvcK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05292___yvcK-BL03419___yvcK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05292___yvcK
# 2: BL03419___yvcK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1008
# Identity:     724/1008 (71.8%)
# Similarity:   724/1008 (71.8%)
# Gaps:          66/1008 ( 6.5%)
# Score: 2651.0
# 
#
#=======================================

BSNT_05292___      1 ATGTTACTCACCGGGACATTGAAAAGAGAAGCCGGAAATAAGATGGGACA     50
                                                               ||||.|.|
BL03419___yvc      1 ------------------------------------------ATGGCAGA      8

BSNT_05292___     51 ----AAAGCCGAAAATCGCAATCTTTGGCGGCGGTACAGGTCTTTCTGTA     96
                         |||    ||||||||||||||||||||.||.||.||.|||||.|||
BL03419___yvc      9 TCAGAAA----AAAATCGCAATCTTTGGCGGAGGAACTGGCCTTTCGGTA     54

BSNT_05292___     97 TTGCTTCGGGGCCTAAAGCATAAACCCGTTGACATCACGGCCATTGTAAC    146
                     .||||..|.||..|.|||||..|.||.||.|||||||||||.|||||.||
BL03419___yvc     55 CTGCTCAGAGGATTGAAGCAGCAGCCGGTAGACATCACGGCGATTGTGAC    104

BSNT_05292___    147 AGTTGCCGATGATGGGGGAAGCTCTGGCCGTCTGCGGAATGAACTGAAAA    196
                     |||.||.|||||.||.||||||||.||..|.|||||..|.||.|||||||
BL03419___yvc    105 AGTCGCAGATGACGGCGGAAGCTCGGGGAGGCTGCGCGACGAGCTGAAAA    154

BSNT_05292___    197 TTCCGCCTCCCGGAGACATCAGAAATGTGCTTGCCGCTTTATCCGATGTG    246
                     ||||.||.||.||.|||.||||||||||.||.||.||..|.||.|||||.
BL03419___yvc    155 TTCCCCCGCCGGGGGACGTCAGAAATGTCCTCGCTGCACTGTCTGATGTC    204

BSNT_05292___    247 GAGCCGCTTGTTGAAGATCTTTTTCAGCACCGCTTCAATAAAGGGAATGA    296
                     ||.||||||||||||||.||.||.||||||||||||..||||||....||
BL03419___yvc    205 GAACCGCTTGTTGAAGACCTGTTCCAGCACCGCTTCTCTAAAGGCGGCGA    254

BSNT_05292___    297 CTTAACAGGCCATTCTCTCGGGAATTTGATTTTGGCAGCGATGACAAATA    346
                     .||||..||||||||..|.||.||||||||||||||.||||||||.||||
BL03419___yvc    255 TTTAATCGGCCATTCATTGGGAAATTTGATTTTGGCGGCGATGACGAATA    304

BSNT_05292___    347 TAACCGGTGATTTTTTTCACGCTGTCACAGAAATGAGCAAGGTGCTGAAT    396
                     |||||||||||||.||||||||.|||||.|||||||||||.||..|.|||
BL03419___yvc    305 TAACCGGTGATTTCTTTCACGCCGTCACTGAAATGAGCAAAGTCTTAAAT    354

BSNT_05292___    397 GTCAGAGGAAAGGTTTTGCCGGCTGCCAATGCCAGTGTCGTTTTGCATGC    446
                     ||.|||||||.||||.||||.||.||||||.||||.||.||..|.|||||
BL03419___yvc    355 GTGAGAGGAAGGGTTCTGCCCGCGGCCAATACCAGCGTTGTCCTTCATGC    404

BSNT_05292___    447 TGAGATGGAAGATGGCCGCGTGGTCTCAGGCGAGTCAACGATCCCGGAAT    496
                     .||.|||||.||.||.|...|..|.|||||.||.||.|||||.|||...|
BL03419___yvc    405 GGAAATGGATGACGGACAGATCATATCAGGGGAATCGACGATTCCGTCTT    454

BSNT_05292___    497 ACGGACAGCGCATTAAGCGTGTTTTTCTCACGCCTGAACAGATTGATCCG    546
                     ||||..||||.|||||.||.||.|||.|.||.||||||.|.||.||.||.
BL03419___yvc    455 ACGGGAAGCGGATTAAACGGGTGTTTTTAACCCCTGAAAAAATCGAACCC    504

BSNT_05292___    547 CTGCCGGAAACAATAGACGTAATCAGGGAAGCGGATTTGATTATTATCGG    596
                     .|.||||||||.||.|||||.|||.|.|..||.||..||||||||.||||
BL03419___yvc    505 GTTCCGGAAACGATTGACGTGATCCGCGGCGCCGACCTGATTATTCTCGG    554

BSNT_05292___    597 CCCGGGAAGTCTCTATACAAGCATTCTGCCCAATTTGCTCGTCCCAAAAA    646
                     |||.|||||.||.|||||.|||||..||||.||..|.|||||.||.||.|
BL03419___yvc    555 CCCCGGAAGCCTGTATACGAGCATCTTGCCGAACCTTCTCGTTCCGAAGA    604

BSNT_05292___    647 TCGGGGAAGAAGTGATAAAGGCGCCGGCGAAAAAAGTATACATTTGCAAC    696
                     |..|||||||..|..||||.||.|||||.||||||||.||.||||||||.
BL03419___yvc    605 TAAGGGAAGAGATATTAAACGCCCCGGCAAAAAAAGTTTATATTTGCAAT    654

BSNT_05292___    697 GTGATGACTCAGCCCGGCGAAACGCTCCATTACACCGCTGCTGATCATGT    746
                     ||.|||||.|||||.||.||||||||..|.||||..||.||.||.|||||
BL03419___yvc    655 GTAATGACCCAGCCGGGAGAAACGCTGTACTACAGTGCGGCAGACCATGT    704

BSNT_05292___    747 GAAAGCGCTCAATCAGCATATGGGCTGCGGT---TTTATTGATACGATAT    793
                     .||||||||.||.||||||||||   |||||   |||||.||||||||..
BL03419___yvc    705 AAAAGCGCTTAACCAGCATATGG---GCGGTCCGTTTATCGATACGATCC    751

BSNT_05292___    794 TAGTGAACAGTGAAGACATTCCCGACGAAAT---AAAACG-TAAGTACGA    839
                     |.||.||||.|||.||.||.||.|||||.||   ..|||| ||  |.|||
BL03419___yvc    752 TCGTCAACAATGAGGAAATCCCGGACGACATTCGGGAACGCTA--TGCGA    799

BSNT_05292___    840 AATGGAATCGGCGCGTCCTGTTGATTTTGATATCGAAGAGCTGAAAGCGA    889
                     |  |||...|||.|..||.||..|.|||.||||.||.||.|||...||||
BL03419___yvc    800 A--GGAGCAGGCACAGCCCGTCCAGTTTAATATTGATGATCTGTCTGCGA    847

BSNT_05292___    890 TGGGGCTTGAAGTCATCAGAGATCAAATTGTAACGTATAAAAATGACGTA    939
                     ||||||||||.|||||||.||||||.|||||.||.||..|.||||.|||.
BL03419___yvc    848 TGGGGCTTGAGGTCATCAAAGATCAGATTGTGACATACGAGAATGGCGTG    897

BSNT_05292___    940 ATACGTCACGATACACATAAAGTGGCCTCTCTTCTTGTTGATTTACTGAA    989
                     ||.|||||.||||||||||||||.||.||.||.|||||||||||..|.||
BL03419___yvc    898 ATCCGTCATGATACACATAAAGTCGCTTCGCTACTTGTTGATTTGTTAAA    947

BSNT_05292___    990 AGAATGA-    996
                     ||||| | 
BL03419___yvc    948 AGAAT-AG    954


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05292 and BL03419

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
