Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05313 and BL03407
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:25
# Commandline: needle
# -asequence dna-align/BSNT_05313___hisG.1.5803.seq
# -bsequence dna-align/BL03407___hisG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05313___hisG-BL03407___hisG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05313___hisG-BL03407___hisG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05313___hisG
# 2: BL03407___hisG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 650
# Identity: 487/650 (74.9%)
# Similarity: 487/650 (74.9%)
# Gaps: 34/650 ( 5.2%)
# Score: 1825.5
#
#
#=======================================
BSNT_05313___ 1 ------------------ATGGCGATGCC-AAAGGGCCGGATATTTGAAG 31
||.|||||||| |||||| |||||||||||.|
BL03407___his 1 ATGGGTAAGGAATTGACGATTGCGATGCCGAAAGGG-CGGATATTTGAGG 49
BSNT_05313___ 32 AAGCGGCAGGGCTGCTGAGGCAGGCAGGCTA-CAGGCTCCCTGAGGAGTT 80
|||||||.|...||||..|..|.|||||||| || ||||||.||.||.||
BL03407___his 50 AAGCGGCCGATATGCTTCGAAAAGCAGGCTATCA-GCTCCCGGAAGAATT 98
BSNT_05313___ 81 TGAAGATTCGAGAAAACTGATCATCGATGTGCCGGAGGAAAATCTTCGTT 130
.||.|||||||||||.||||||||..|.|||||.||.|||||.|||||.|
BL03407___his 99 CGACGATTCGAGAAAGCTGATCATTCAAGTGCCTGAAGAAAACCTTCGCT 148
BSNT_05313___ 131 TCATATTAGCAAAGCCGATGGACGTAACCACGTATGTGGAGCATGGCGTG 180
|.||..|.||.|||||||||||.||.||.||.|||||.|||||.||.|||
BL03407___his 149 TTATCCTCGCTAAGCCGATGGATGTCACAACATATGTCGAGCACGGGGTG 198
BSNT_05313___ 181 GCAGACGTCGGAATTGCGGGCAAGGATGTCATGCTGGAGGAGGAACGCGA 230
||.||.||||||||.||.|||||.||||||.||||.||.||.|||||.||
BL03407___his 199 GCCGATGTCGGAATCGCAGGCAAAGATGTCTTGCTAGAAGAAGAACGAGA 248
BSNT_05313___ 231 TGTGTATGAGGTACTGGATTTAAAAATCAGCAAATGCC-ACTTAGCTGTC 279
|||.||||||||.||.||||||||.||||||||||||| .||| ||.||.
BL03407___his 249 TGTCTATGAGGTTCTTGATTTAAACATCAGCAAATGCCGTCTT-GCCGTA 297
BSNT_05313___ 280 GCCGGACTTCCGAATAC-AGACTGGAGCGG----CGTAGCGCCAAGAATC 324
|||||.||.|| | ||||.|..||.| |||.|||||..|..|.
BL03407___his 298 GCCGGCCTGCC-----CGAGACGGCGGCAGACACCGTTGCGCCCCGGGTT 342
BSNT_05313___ 325 GCGACAAAGTATCCGAATGTGGCTTCCAGTTATTTCAGAGAGCAGGGAGA 374
|||||.|||||.||||||||.||.||.||.||.||||||||.||||||||
BL03407___his 343 GCGACCAAGTACCCGAATGTCGCATCAAGCTACTTCAGAGAACAGGGAGA 392
BSNT_05313___ 375 ACAAGTCGAGATCATTAAGCTCAACGGTTCAATTGAACTGGCTCCGCTCA 424
||||||.||.|||||.|||||||||||.||.||||||||.||||||||.|
BL03407___his 393 ACAAGTGGAAATCATCAAGCTCAACGGGTCGATTGAACTCGCTCCGCTGA 442
BSNT_05313___ 425 TTGGGCTTGCAGATCGGATAGTGGACATTGTTTCCACAGGACAGACGCTG 474
|.||||||||.|..||.||.||.||.||.||.||.|||||.|||||..||
BL03407___his 443 TCGGGCTTGCCGGCCGAATCGTTGATATCGTATCAACAGGGCAGACTTTG 492
BSNT_05313___ 475 AAAGAAAATGGGCTTGTTGAAACGGAGCACATTTGTGACATTACGTCTCG 524
...|||||.|||||.||||||||.||..|.|||||.|||||.||.||.||
BL03407___his 493 CGTGAAAACGGGCTAGTTGAAACTGAAAAAATTTGCGACATCACATCCCG 542
BSNT_05313___ 525 CTTTATTGTCAACCCGGTAAGCTATCGCATGAAAGACGATGTGATTGACG 574
|||.||.||.||.||.||.||||||||.||||||||||..||.||.||.|
BL03407___his 543 CTTAATCGTAAATCCTGTCAGCTATCGAATGAAAGACGCAGTCATCGATG 592
BSNT_05313___ 575 AAATGGCATCCCGCCTATCTCTCGTTGTGGAAGGAGAGACGGCAAAATGA 624
|||||||.||..|.||.|||||..|||||||||||||.|..|||||||||
BL03407___his 593 AAATGGCTTCAAGACTTTCTCTTATTGTGGAAGGAGAAAAAGCAAAATGA 642
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