Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05341 and BL03398
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:27
# Commandline: needle
# -asequence dna-align/BSNT_05341___yvlC.1.5803.seq
# -bsequence dna-align/BL03398___yvlC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05341___yvlC-BL03398___yvlC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05341___yvlC-BL03398___yvlC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05341___yvlC
# 2: BL03398___yvlC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 136/212 (64.2%)
# Similarity: 136/212 (64.2%)
# Gaps: 25/212 (11.8%)
# Score: 397.0
#
#
#=======================================
BSNT_05341___ 1 ATGAATAAGCTTTATCGCTCAGAAAAAAATAAGAAA-ATCGCCGGTGTTA 49
|||||.|.|||.|.|||.||.||||.|.| .||||| ||.|||||.||..
BL03398___yvl 1 ATGAAAAGGCTATTTCGATCCGAAACAGA-CAGAAAGATTGCCGGGGTCG 49
BSNT_05341___ 50 TCGGAGGTCTCGCGGAATATTTCAATTGGGACGCATCACTCCTCAGAGTC 99
||||||||||.||.||||||||.|||..|||.||.|||.|.||.|||.||
BL03398___yvl 50 TCGGAGGTCTTGCTGAATATTTAAATATGGATGCGTCATTGCTGAGAATC 99
BSNT_05341___ 100 ATAACTGTCATCTTAGCCATTAT----------GACAAGTGTCTTGCCGG 139
||.||.|| ||| ||||| |||..|.| |.||.|
BL03398___yvl 100 ATTACGGT--TCT-----ATTATTTATATTTTCGACCGGAG---TTCCCG 139
BSNT_05341___ 140 TTTTGCTCATTTATATCATTTGGATTTTTATCGTCCCGTCAGAAAGGGAT 189
|..||||.||||||||..|.|||.|.||..|.||.|||...|||.|.||.
BL03398___yvl 140 TCCTGCTGATTTATATTGTCTGGGTATTCCTTGTGCCGAATGAAGGAGAC 189
BSNT_05341___ 190 ATGAA---ATGA 198
.|.|| ||||
BL03398___yvl 190 GTCAACAGATGA 201
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