Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05349 and BL03394
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:28
# Commandline: needle
# -asequence dna-align/BSNT_05349___uvrB.1.5803.seq
# -bsequence dna-align/BL03394___uvrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05349___uvrB-BL03394___uvrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05349___uvrB-BL03394___uvrB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05349___uvrB
# 2: BL03394___uvrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1997
# Identity: 1579/1997 (79.1%)
# Similarity: 1579/1997 (79.1%)
# Gaps: 22/1997 ( 1.1%)
# Score: 6186.0
#
#
#=======================================
BSNT_05349___ 1 GTGAAAGATCGCTTTGAGTTAGTCTCGAAATATCAGCCCCAGGGAGATCA 50
||||||||.||||||||.|||||||||||.||||||||||||||.|||||
BL03394___uvr 1 GTGAAAGACCGCTTTGAATTAGTCTCGAATTATCAGCCCCAGGGGGATCA 50
BSNT_05349___ 51 GCCGAAAGCCATTGAAAAGCTTGTAAAAGGAATTCAGGAGGGCAAGAAGC 100
|||||||||.|||||..|||||||.||||||||..|.||.||||..||||
BL03394___uvr 51 GCCGAAAGCGATTGATCAGCTTGTCAAAGGAATCAATGAAGGCAGAAAGC 100
BSNT_05349___ 101 ATCAGACTCTGCTGGGTGCGACAGGAACTGGGAAAACATTTACGGTGTCT 150
|||||||.||..||||.||.||.||.|||||.||.||.||||||.||||.
BL03394___uvr 101 ATCAGACGCTTTTGGGGGCAACCGGTACTGGAAAGACGTTTACGATGTCG 150
BSNT_05349___ 151 AATTTGATTAAAGAAGTCAATAAGCCGACTCTCGTGATTGCCCATAACAA 200
||..||||||||||.|||||.||.|||||||||||.||.|||||.|||||
BL03394___uvr 151 AACGTGATTAAAGAGGTCAACAAACCGACTCTCGTCATCGCCCACAACAA 200
BSNT_05349___ 201 AACCCTTGCTGGACAGCTTTACAGTGAGTTCAAGGAATTTTTTCCGAACA 250
|||..|.||.||.|||||||||||.|||||.||.||||||||.||.||||
BL03394___uvr 201 AACGTTAGCCGGGCAGCTTTACAGCGAGTTTAAAGAATTTTTCCCCAACA 250
BSNT_05349___ 251 ATGCTGTCGAGTATTTTGTCAGCTACTATGATTATTATCAGCCGGAGGCG 300
|.||.|||||.||||||||||||||.|||||.|||||.|||||.|||||.
BL03394___uvr 251 ACGCAGTCGAATATTTTGTCAGCTATTATGACTATTACCAGCCTGAGGCC 300
BSNT_05349___ 301 TATGTGCCTCAAACGGATACATTTATAGAGAAAGACGCTAGTATTAATGA 350
||.|||||.||.||.|||||||||||.||.|||||.||.||.|||||.||
BL03394___uvr 301 TACGTGCCCCAGACTGATACATTTATCGAAAAAGATGCCAGCATTAACGA 350
BSNT_05349___ 351 TGAAATTGATAAACTGAGACACTCCGCCACATCAGCTTTGTTTGAGCGCA 400
|||.|||||||||.|.||.|||||.|||||.||.|||.|.|||||.||||
BL03394___uvr 351 TGAGATTGATAAATTAAGGCACTCTGCCACGTCTGCTCTTTTTGAACGCA 400
BSNT_05349___ 401 GAGATGTCATTATTATTGCGAGTGTGTCTTGTATATACGGCCTCGGTTCG 450
.|||||||||.|||.|.||||||||.||||||||.||||||.|.|||||.
BL03394___uvr 401 AAGATGTCATCATTGTGGCGAGTGTCTCTTGTATTTACGGCTTGGGTTCT 450
BSNT_05349___ 451 CCTGAGGAATACCGGGAAATGGTCGTGTCACTGCGGACTGAAATGGAAAT 500
||||||||||||.||||||||||..|.||.||..|.||.|||||||||||
BL03394___uvr 451 CCTGAGGAATACAGGGAAATGGTGCTCTCGCTCAGAACGGAAATGGAAAT 500
BSNT_05349___ 501 TGAGCGCAATGAGCTGCTCAGAAAACTTGTAGACATCCAATATGCCCGCA 550
.|||||.|||||||||||||||||.||.||.||||||||||||||.||.|
BL03394___uvr 501 CGAGCGGAATGAGCTGCTCAGAAAGCTCGTTGACATCCAATATGCGCGGA 550
BSNT_05349___ 551 ACGATATCGACTTTCAGCGCGGTACATTTCGTGTGCGCGGGGATGTAGTG 600
|.||.|||||.|||||||||||.|||||..|.||||||||.|||||.||.
BL03394___uvr 551 ATGACATCGATTTTCAGCGCGGAACATTCAGGGTGCGCGGCGATGTCGTC 600
BSNT_05349___ 601 GAAATCTTTCCGGCATCCCGTGATGAGCATTGTATCAGAGTTGAATTTTT 650
||.|||||||||||.||..|.||||||||.||..||.|||||||||||||
BL03394___uvr 601 GAGATCTTTCCGGCTTCAAGGGATGAGCACTGCGTCCGAGTTGAATTTTT 650
BSNT_05349___ 651 CGGTGACGAAATCGAACGGATTCGGGAAGTGGATGCGCTGACAGGAGAAA 700
|||.|||||||||||||||||..|||||||||||||.|||||.||.||||
BL03394___uvr 651 CGGGGACGAAATCGAACGGATCAGGGAAGTGGATGCCCTGACTGGCGAAA 700
BSNT_05349___ 701 TTCTCGGCGACCGAGATCATGTTGCGATTTTCCCGGCATCCCACTTCGTA 750
||.|.||.||..|.||.||.||.|||||.||||||||.|||||||||||.
BL03394___uvr 701 TTTTAGGGGAGAGGGAACACGTCGCGATCTTCCCGGCTTCCCACTTCGTC 750
BSNT_05349___ 751 ACGCGGGCCGAGAAAATGGAGAAGGCGATTCA-AAATATCGAGAAGGAGC 799
||.||||..||.||.|||.||||.|||| ||| |||.||.||..||||||
BL03394___uvr 751 ACCCGGGAAGAAAAGATGAAGAAAGCGA-TCATAAACATTGAAGAGGAGC 799
BSNT_05349___ 800 TTGAGGAGCAGCTGAAGG----TCATGCACGAAAACGGAAAGCTCCTTGA 845
|.||.||||..||.||.| ||.| |||.|.||.|||||||||||
BL03394___uvr 800 TGGAAGAGCGCCTCAAAGCGCTTCGT----GAAGAAGGCAAGCTCCTTGA 845
BSNT_05349___ 846 AGCGCAGCGTTTAGAGCAGCGGACAAGATATGATCTTGAAATGATGCGTG 895
||||||||||.|.||.||||||||.|||||.|||.|.|||||||||||.|
BL03394___uvr 846 AGCGCAGCGTCTGGAACAGCGGACGAGATACGATTTGGAAATGATGCGCG 895
BSNT_05349___ 896 AAATGGGTTTCTGCTCCGGCATCGAGAACTATTCAAGACATTTGACTCTG 945
|||||||.||.|||||.||||||||.||||||||||||||||||||.||.
BL03394___uvr 896 AAATGGGCTTTTGCTCGGGCATCGAAAACTATTCAAGACATTTGACGCTT 945
BSNT_05349___ 946 CGGCCTCCAGGTTCAACGCCGTATACGCTTCTTGATTATTTCCCAGACGA 995
||.||..|||||||.||.||.||||||||.||.|||||.||.||.||.||
BL03394___uvr 946 CGTCCGGCAGGTTCGACTCCATATACGCTGCTCGATTACTTTCCGGATGA 995
BSNT_05349___ 996 TTTTATGATCGTGGTGGATGAGTCGCATGTGACAATTCCCCAGGTGCGCG 1045
|||..||||.||..|.||||||||||||||.||.||.||.|||.|..|.|
BL03394___uvr 996 TTTCCTGATGGTCATAGATGAGTCGCATGTCACCATACCGCAGATCAGAG 1045
BSNT_05349___ 1046 GCATGTTTAACGGAGACCAGGCGCGGAAACAGGTGCTCGTGGATCACGGC 1095
|.||||..|||||||||||||||.|.||||||||.|||||.|||||.||.
BL03394___uvr 1046 GAATGTACAACGGAGACCAGGCGAGAAAACAGGTTCTCGTCGATCATGGA 1095
BSNT_05349___ 1096 TTCCGGCTTCCATCAGCGCTT--GATAACCGTCCGCTTCGTTTTGAGGAA 1143
|||.||||.||.|| ||||| ||||||||||||||..|.|||||.||.
BL03394___uvr 1096 TTCAGGCTGCCTTC--CGCTTTGGATAACCGTCCGCTCAGGTTTGAAGAG 1143
BSNT_05349___ 1144 TTTGAAAAGCATATGCACAATATCGTGTATGTATCCGCAACACCAGGGCC 1193
|||||||||||.||.|||||.|||||||||||.||.||.||.||.|||||
BL03394___uvr 1144 TTTGAAAAGCACATTCACAACATCGTGTATGTGTCGGCTACGCCGGGGCC 1193
BSNT_05349___ 1194 GTACGAGATTGAACATACAGATGAAATGGTCGAACAGATCATTCGTCCGA 1243
.||.||..||||.|||||...|||||||||.||.||||||||.||.||||
BL03394___uvr 1194 TTATGAACTTGAGCATACGCCTGAAATGGTAGAGCAGATCATCCGGCCGA 1243
BSNT_05349___ 1244 CGGGGCTTCTTGACCCGCTTATTGACGTCCGTCCAATCGAAGGTCAGATT 1293
|.|||||.||.||.|||.|||||||.||..|.||.||.|||||.|||||.
BL03394___uvr 1244 CAGGGCTGCTCGATCCGATTATTGAGGTAAGGCCGATTGAAGGGCAGATC 1293
BSNT_05349___ 1294 GACGACTTGATCGGCGAAATTCAAGCA-AGAATCGAGCGAAATGAACGGG 1342
||.||..|||||||.|||| ||.|||| |||||||||||.||||||||.|
BL03394___uvr 1294 GATGATCTGATCGGTGAAA-TCCAGCAGAGAATCGAGCGGAATGAACGCG 1342
BSNT_05349___ 1343 TGCTTGTGACAACTTTGACGAAGAAGATGTCAGAGGATCTGACCGATTAT 1392
|.||.||.||.||..|||||||.||.|||||.||||||.||||.||||||
BL03394___uvr 1343 TCCTCGTCACGACGCTGACGAAAAAAATGTCCGAGGATTTGACGGATTAT 1392
BSNT_05349___ 1393 TTAAAGGAAATCGGCATTAAAGTAAACTATCTGCATTCTGAAATCAAGAC 1442
.|.|||||||||||.||.||.||.|..||.||||||||.||.||.||.||
BL03394___uvr 1393 CTGAAGGAAATCGGTATCAAGGTCACGTACCTGCATTCAGAGATTAAAAC 1442
BSNT_05349___ 1443 GCTTGAACGGATTGAAATTATCCGCGACCTGCGCCTTGGCAAGTACGATG 1492
|||.||.|||||.||.||.||.||||||||.|||||.||||||.|.||.|
BL03394___uvr 1443 GCTGGAGCGGATCGAGATCATACGCGACCTTCGCCTCGGCAAGCATGACG 1492
BSNT_05349___ 1493 TGCTTGTCGGCATCAACCTGCTGAGGGAAGGTTTGGACATTCCCGAAGTA 1542
|.||.||||||||||||||||||||||||||..|.||.|||||.||.||.
BL03394___uvr 1493 TTCTCGTCGGCATCAACCTGCTGAGGGAAGGACTCGATATTCCTGAGGTT 1542
BSNT_05349___ 1543 TCCCTTGTTGCGATTTTGGATGCGGATAAGGAAGGTTTCCTTCGTTCGGA 1592
||.||.||.||.|||.|.||.||.||.||.|||||.||..|.||.||.||
BL03394___uvr 1543 TCACTCGTCGCCATTCTTGACGCAGACAAAGAAGGCTTTTTGCGGTCCGA 1592
BSNT_05349___ 1593 GCGGTCGCTGATCCAGACCATCGGACGGGCAGCGAGAAATGCGGAAGGCC 1642
.||.|||||.|||||.||.|||||.||.||.||.||||||||.|||||||
BL03394___uvr 1593 ACGCTCGCTCATCCAAACGATCGGCCGCGCCGCCAGAAATGCCGAAGGCC 1642
BSNT_05349___ 1643 GCGTCATTATGTACGCCGATAAAATAACGAAGTCTATGGAAATTGCGATT 1692
||||.||.|||||.|||||.|||||.||.||.||.||||||||.||.||.
BL03394___uvr 1643 GCGTAATCATGTATGCCGACAAAATCACCAACTCGATGGAAATCGCAATC 1692
BSNT_05349___ 1693 AATGAAACAAAACGCCGCCGCGAGCAGCAGGAGCGGTT-TAATGAAGAGC 1741
||||||||.||.|||||||||||.||||||||| |.|| ||||||..|.|
BL03394___uvr 1693 AATGAAACGAAGCGCCGCCGCGAACAGCAGGAG-GCTTATAATGAGAAAC 1741
BSNT_05349___ 1742 ACGGCATTACGCCGAAAACGATAAATAAAGAAATTCGCGATGTCATTCGT 1791
||||||||||||||||||||||.||.|||.|.||..|.||.|||||.||.
BL03394___uvr 1742 ACGGCATTACGCCGAAAACGATCAACAAAAAGATCAGGGACGTCATCCGG 1791
BSNT_05349___ 1792 GCCACAGTAGCAGCTGAGGATAAAGCGGAATACAAAACAAAAGCCGCGCC 1841
||.||....||.|||||.||..|.|..|||||..||...||||..|.|||
BL03394___uvr 1792 GCAACTCATGCTGCTGAAGACCAGGAAGAATATCAAGTGAAAGAGGAGCC 1841
BSNT_05349___ 1842 GAAGCTGTCGAAAATGACGAAGAAAGAACGCCAGAAAGTCGTTGAACAGA 1891
||||||.|||||.||||||||||||||.||..|.|||||..|.|..||.|
BL03394___uvr 1842 GAAGCTTTCGAAGATGACGAAGAAAGAGCGGGAAAAAGTGATCGCTCAAA 1891
BSNT_05349___ 1892 TGG--AGCATGAAATGAAGGAAGCCGCCAAGGCGCTTGACTTTGAGAGAG 1939
||| ||| ||.|||||||||||.||.||.||||||||||||||..|.|
BL03394___uvr 1892 TGGAAAGC--GACATGAAGGAAGCGGCAAAAGCGCTTGACTTTGAACGCG 1939
BSNT_05349___ 1940 CCGCGGAGCTTCGCGATTTACTTTTAGAGCTAAAAGCGGAAGGATGA 1986
||||.|||||||||||.||.||..|||||.|||||.|||||||||||
BL03394___uvr 1940 CCGCCGAGCTTCGCGACTTGCTCCTAGAGTTAAAATCGGAAGGATGA 1986
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