Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05351 and BL03393
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:28
# Commandline: needle
# -asequence dna-align/BSNT_05351___csbA.1.5803.seq
# -bsequence dna-align/BL03393___csbA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05351___csbA-BL03393___csbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05351___csbA-BL03393___csbA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05351___csbA
# 2: BL03393___csbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity: 170/238 (71.4%)
# Similarity: 170/238 (71.4%)
# Gaps: 11/238 ( 4.6%)
# Score: 580.0
#
#
#=======================================
BSNT_05351___ 1 TTGATTACAAAAGCCGTTTTTGCATTGTTTTTCCCTTTTATGCTTG--TT 48
.||.||||||||||||||||||||.||.|.||.||||||||.|||| ||
BL03393___csb 1 GTGTTTACAAAAGCCGTTTTTGCACTGATATTTCCTTTTATTCTTGTCTT 50
BSNT_05351___ 49 GTTCTATTTACTAGAGTCACCTTTAATCATTATGTGGCGATCGCTTTAAC 98
|| |.|||||.||.||.||||.|||.|||||.||.|..||.||..|.||
BL03393___csb 51 GT--TTTTTACAAGGGTGACCTATAACCATTACGTCGGAATTGCGCTCAC 98
BSNT_05351___ 99 AGCTGCATTGCTGTTTGCCTCTTATTTAAAAGGCTATACAGAAACGTATT 148
.||.||..||.||||.||.||.|||||||||||.|||||.|||||.|.||
BL03393___csb 99 TGCAGCGCTGTTGTTCGCTTCATATTTAAAAGGTTATACGGAAACCTTTT 148
BSNT_05351___ 149 TTATTGTAGGATTGGATGTTGTGTCTCTTGTGGCTGG--CGGACTGTACA 196
|||||||||||.|.|||.|.|..||.||.||.||.|| || ||.||..
BL03393___csb 149 TTATTGTAGGACTTGATATCGCCTCGCTCGTCGCCGGTTCG--CTCTATG 196
BSNT_05351___ 197 TGGCCAAAAAAGCTGCAGAGAAAAAAGAAGAATAA--- 231
.|||.|||||.||.|..||.||.||.|||||.|.|
BL03393___csb 197 CGGCAAAAAAGGCGGGCGAAAAGAAGGAAGACTCATAG 234
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