Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05362 and BL03390
See
Amino acid alignment /
Visit
BSNT_05362 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:29
# Commandline: needle
# -asequence dna-align/BSNT_05362___yvjB.1.5803.seq
# -bsequence dna-align/BL03390___ctpB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05362___yvjB-BL03390___ctpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05362___yvjB-BL03390___ctpB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05362___yvjB
# 2: BL03390___ctpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1495
# Identity: 1048/1495 (70.1%)
# Similarity: 1048/1495 (70.1%)
# Gaps: 107/1495 ( 7.2%)
# Score: 3525.0
#
#
#=======================================
BSNT_05362___ 1 ATGAATCAAAAAATAAT--GGCTGTGATAGCAGCAGGGAGC--------- 39
||||||||.||.||..| |||| ||.||..|.||
BL03390___ctp 1 ATGAATCAGAAGATTGTGCGGCT-------CATCATTGCGCTCAGCCTGT 43
BSNT_05362___ 40 -ATGCTGTTCGG----AGGCGCCG----------GTGTATATGCGGGAAT 74
||||.|.|.|| |||||||| || ||.|||..| |
BL03390___ctp 44 TATGCGGCTTGGTAACAGGCGCCGGCCCGATTCCGT-TACATGATG---T 89
BSNT_05362___ 75 CAACCTGCTTGAGATGGATAAGCCCCAGACTGCAGCAGTTCCCGCGACGG 124
| |.||.|.|.|.||.||| |.|||.||.||.|.|.||
BL03390___ctp 90 C-----GTTTCAAAAGCATCAGC----GGCTGAAGAAGCTGCAGC----- 125
BSNT_05362___ 125 CACAAGCTGACTCTGAACGGGATAAAGCTA--TGGACAAAATCGAAAAAG 172
||.|||| |.||..|.||| |.| ||||.|||||.||.||||
BL03390___ctp 126 CAAAAGC--------ACCGCTAGAAA-CGAATTGGAGAAAATTGAGAAAG 166
BSNT_05362___ 173 CGTATGAGTTAATTTCGAATGAGTACGTAGAAAAAGTAGATAGAGAAAAG 222
|.|||||..|.|||||.|||||.||.||.||..|.||.||.||.|||||.
BL03390___ctp 167 CATATGACCTGATTTCAAATGAATATGTGGAGCAGGTCGACAGGGAAAAA 216
BSNT_05362___ 223 CTGCTCGAGGGAGCCATCCAGGGAATGCTGTCTACGCTAAATGATCCTTA 272
|||.|.||.||||||||.|||||.|||||.||.||..|.|||||.||.||
BL03390___ctp 217 CTGTTGGAAGGAGCCATACAGGGCATGCTTTCAACATTGAATGACCCATA 266
BSNT_05362___ 273 TTCTGTTTACATGGATAAGCAGACAGCTAAGCAATTTTCTGATTCTCTTG 322
.||.||.||.||||||||.|||||.||.||||..|||||.|||||.||||
BL03390___ctp 267 CTCGGTCTATATGGATAAACAGACGGCAAAGCGGTTTTCAGATTCCCTTG 316
BSNT_05362___ 323 ATTCCTCATTTGAAGGCATCGGGGCTGAGGTTGGCATGGAAGACGGCAAA 372
|||||||.||||||||.|||||.||.||..|.||.|||||||||.|.|||
BL03390___ctp 317 ATTCCTCTTTTGAAGGAATCGGTGCAGAAATCGGAATGGAAGACAGAAAA 366
BSNT_05362___ 373 ATTATTATTGTTTCCCCATTCAAGAAATCGCCAGCGGAAAAAGCCGGGTT 422
||.|||||.|||||.||.||.||..|.||.||.||.||.||||||||.||
BL03390___ctp 367 ATCATTATCGTTTCTCCTTTTAAACAGTCTCCGGCAGAGAAAGCCGGATT 416
BSNT_05362___ 423 GAAGCCTAATGATGAAATTATCAGCATCAATGGAGAATCGATGGCCGGCA 472
.|||||.||.||||||||.||.||||||.|.||.||.||.|||..|||.|
BL03390___ctp 417 AAAGCCGAACGATGAAATCATTAGCATCGACGGCGATTCCATGAGCGGAA 466
BSNT_05362___ 473 AGGATTTAAACCACGCTGTGTTAAAAATAAGAGGAAAAAAAGGGTCCAGC 522
.||||||.||..||||.||.|||||.||.|||||.|||||.||.||.|..
BL03390___ctp 467 TGGATTTGAATGACGCCGTATTAAAGATCAGAGGCAAAAAGGGATCGACG 516
BSNT_05362___ 523 GTTTCAATGAAGATTCAGCGGCCTGGAACGAAGAAGCAGCTGTCATTCCG 572
|||.||.||||..||||.||.||.||||.|||..|.||||||.||||...
BL03390___ctp 517 GTTACACTGAAAGTTCACCGACCCGGAATGAAAGACCAGCTGACATTTAC 566
BSNT_05362___ 573 GATCAAGAGAGCTGAGATTCCACTCGAAACGGTTTTTGCAT-CAGAGAAA 621
|||.|||.|.|.|||.||.||.||.||||||||.|||||.| ||.| ||.
BL03390___ctp 567 GATTAAGCGCGATGAAATCCCGCTGGAAACGGTGTTTGCTTCCATA-AAG 615
BSNT_05362___ 622 AAAGTACAGGGGCATTCTGTCGGATATATTGCCATCTCTACTTTTTCTGA 671
||||||||||...|..|||||||.|||||.||.||.|||.|.|||||.||
BL03390___ctp 616 AAAGTACAGGATAAACCTGTCGGCTATATCGCAATATCTTCCTTTTCCGA 665
BSNT_05362___ 672 GCACACCGCAGAGGATTT---TGCAAAAGCGCTGAGGGAGCTTGAGAAAA 718
.||.||.|||.|.||||| |||..|| ||||...||||||||||||
BL03390___ctp 666 ACATACGGCAAAAGATTTTACTGCTGAA---CTGAAAAAGCTTGAGAAAA 712
BSNT_05362___ 719 AAGAAATAGAAGGACTTGTCATTGATGTACGCGGCAACCCGGGCGGATAT 768
|.|.||||.||||.||.||..|.||||||.|.||.||.||||||||.||
BL03390___ctp 713 AGGGAATAAAAGGGCTCGTTTTGGATGTAAGAGGAAATCCGGGCGGGTA- 761
BSNT_05362___ 769 CTT-CAAAGTGTGGAAGAAATTCTTAAGCATTTCGTTACAAAGGATCAGC 817
||| |||||.||||||||.|||.|.||.|||||.||.|||||.|||||.|
BL03390___ctp 762 CTTGCAAAGCGTGGAAGACATTTTAAAACATTTTGTGACAAAAGATCATC 811
BSNT_05362___ 818 CGTATATTCAGATTGCTGAACGCAATGGGGATAAAAAACGTTATTTTTCA 867
|||||||.||.||.||.|||.|.||.||..|||||||||..||.||.|||
BL03390___ctp 812 CGTATATACAAATCGCCGAAAGAAACGGAAATAAAAAACAATACTTCTCA 861
BSNT_05362___ 868 ACATTGACCCATAAAAAAGCGTACCCTGTCAATGTGATTACGGATAAAGG 917
|.|||.|...|.||||||.|.||||||||.|..|||||.|||||.||.||
BL03390___ctp 862 AAATTAAAAGAGAAAAAACCATACCCTGTGAGCGTGATCACGGACAAGGG 911
BSNT_05362___ 918 AAGTGCCTCTGCATCAGAAATTCTTGCCGGCGCATTAAAGGAAGC---TG 964
.||.||.||.||.||.|||||||||||.|||||||||||.||||| .|
BL03390___ctp 912 CAGCGCTTCGGCTTCGGAAATTCTTGCAGGCGCATTAAAAGAAGCCGAGG 961
BSNT_05362___ 965 GCCATTATGATGTTGTAGGCGATACGTCTTTTGGAAAGGGAACGGTTCAA 1014
|| ||.||.||.||.||||||.|.||.||||||||||||||.||.||.
BL03390___ctp 962 GC---TACGACGTGGTTGGCGATCCTTCCTTTGGAAAGGGAACCGTCCAG 1008
BSNT_05362___ 1015 CAGGCTGTGCCAATGGGGGACGGCAGCAACATCAAATTAACGCTTTACAA 1064
|||||.|||||.|||||.|||||.|||||.||.||..|.|||||.|||||
BL03390___ctp 1009 CAGGCGGTGCCGATGGGAGACGGTAGCAATATTAAGCTGACGCTGTACAA 1058
BSNT_05362___ 1065 GTGGCTGACGCCAAATGGAAACTGGATTCATAAGAAAGGAATTGAACCGA 1114
.||||||||.||.||.|||||.|||||.||||||.|.||.|||.|.||||
BL03390___ctp 1059 ATGGCTGACACCTAAAGGAAATTGGATCCATAAGCAGGGCATTCAGCCGA 1108
BSNT_05362___ 1115 CCATTGCGATTAAGCAGCCCGATTATTTTTCCGCCGGGCCTTTACAGCTG 1164
||.||.|..|.|.||||||.|..|||||.||.||.|||||||||||||||
BL03390___ctp 1109 CCGTTCCAGTCACGCAGCCTGCATATTTCTCGGCGGGGCCTTTACAGCTG 1158
BSNT_05362___ 1165 AAAGAGCCGCTTAAAGTGGACATGAACAATGAAGACGTCAAGCATGCGCA 1214
|||||.||.||.||...|||.||||||||..|.||..|.||||..|||||
BL03390___ctp 1159 AAAGAACCCCTCAAGCCGGATATGAACAACAATGAAATTAAGCGGGCGCA 1208
BSNT_05362___ 1215 GGTATTGTTAAAAGGTCTCAGCTTTGATCCGGGACGTGAGGATGGCTATT 1264
|.|..||.|.|||||.|||.|.||||..||.||.||.||.||.|||||||
BL03390___ctp 1209 GTTCCTGCTGAAAGGACTCGGGTTTGTCCCCGGCCGGGAAGACGGCTATT 1258
BSNT_05362___ 1265 TCA--GCAAAG-ACATGAAAAAAGCGGTTATGGCTTTTCAGGATCA--AA 1309
.|| | |||| ||| ||||||||.||.|||||.||||||| || ||
BL03390___ctp 1259 ACAATG-AAAGCACA--AAAAAAGCCGTCATGGCGTTTCAGG--CAGCAA 1303
BSNT_05362___ 1310 ACAAGCTGAATAAAACCGGTGTGATCGACACTCGC-----ACTGCAGAGA 1354
||||||||||..||||.||..|.||.||| | ||.|||.|.|
BL03390___ctp 1304 ACAAGCTGAAGCAAACAGGGATCATTGAC-----CAAAAAACGGCAAATA 1348
BSNT_05362___ 1355 CATTAAACCGGCAGATAGAAAAGAAAAA-ATCAGATGAAAAAAATGATTT 1403
||.|.||||.||.|||.||..||||||| || .||||||||.||.|||.|
BL03390___ctp 1349 CAATGAACCTGCGGATTGAGGAGAAAAAGAT-GGATGAAAAGAACGATCT 1397
BSNT_05362___ 1404 GCAGCTTCAAACAGCATTGAAATCATTATTTGTCAATTAA----- 1443
.|||||.|||.|.|||||.|||....|.|||..||| ||
BL03390___ctp 1398 TCAGCTGCAAGCCGCATTAAAAGTGCTGTTTAACAA--AAAGTGA 1440
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.