Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05373 and BL03379
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:30
# Commandline: needle
# -asequence dna-align/BSNT_05373.1.5803.seq
# -bsequence dna-align/BL03379.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05373-BL03379.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05373-BL03379.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05373
# 2: BL03379
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 254/402 (63.2%)
# Similarity: 254/402 (63.2%)
# Gaps: 48/402 (11.9%)
# Score: 713.0
#
#
#=======================================
BSNT_05373 1 TTGAAGAGCATTGAAGATTATACGCTTTTATCAGCTTATTATCATCTTCT 50
||||..||||..||.|||||.|.|||.|||.|..||||||||||.|||.|
BL03379 1 TTGACAAGCACCGACGATTACATGCTCTTAACGACTTATTATCAGCTTTT 50
BSNT_05373 51 TTTTACCATTGAAGAAGGGTTGTGTTATTTGATAGAGGC---TGAAGAGA 97
.|||||.||||||||.|||||.||.|||||.|||||.|| |.|||
BL03379 51 GTTTACGATTGAAGAGGGGTTTTGCTATTTAATAGAAGCGAATCAAG--- 97
BSNT_05373 98 ATTTATCAAAAACAGAAGGGGATCGGATCTACCAAGATCTGATCCAAGCC 147
||||..|.||.||||||||.||.|||||.|...|.|||.|.|||.|.||.
BL03379 98 ATTTGGCGAAGACAGAAGGAGAGCGGATTTTTAACGATTTAATCTATGCT 147
BSNT_05373 148 TTTTTTTATTTGGATTCAACACA------TTCAACACTTCTCTTCATTAT 191
||||||.|.||||||||..|.|| || |.||.|..|||.|
BL03379 148 TTTTTTCAGTTGGATTCGTCGCACGCTGTTT------TGCTGTCGATTTT 191
BSNT_05373 192 GGATTCGCGGTGTGCTGAA------ATTTGTGTGAAAGCATTTGACCAAA 235
|||..|..|.|||||..|| |||.||.| .||||| ||.|
BL03379 192 GGAGACAAGCTGTGCCAAATCTTCGATTCGTTT------TTTTGA-CAGA 234
BSNT_05373 236 TTTTTGCG-GAGTTTGATCA-ATTGGTCTCTTTCTCTTTTCCCTCTCATG 283
.|.||.|| |||||||| || .|||.|||..|.|..||.|||.|||..||
BL03379 235 GTCTTCCGTGAGTTTGA-CAGCTTGATCTACTACAATTATCCGTCTGCTG 283
BSNT_05373 284 AGTTCTGTGAGTAT---TTAAAGGAACATTTTCTGATT----CATTATAG 326
|.|| |.||.|| ||.|...|.||.||| || |.||||.|
BL03379 284 AATT---TCAGCATGACTTGATCCATCACTTT----TTACCGCTTTATCG 326
BSNT_05373 327 AAAATGGATGCTGTCTATTCATCAATGTATGGAACCCTTTTTAATCAATT 376
..||||||||....|.||.||.|||||.|||.||||.|.|.|.|||.|||
BL03379 327 GGAATGGATGAAAACGATCCACCAATGCATGAAACCTTATGTCATCCATT 376
BSNT_05373 377 AG 378
|.
BL03379 377 AA 378
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