Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05380 and BL03374
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:31
# Commandline: needle
# -asequence dna-align/BSNT_05380___hag.1.5803.seq
# -bsequence dna-align/BL03374___hag.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05380___hag-BL03374___hag.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05380___hag-BL03374___hag.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05380___hag
# 2: BL03374___hag
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 972
# Identity: 745/972 (76.6%)
# Similarity: 745/972 (76.6%)
# Gaps: 93/972 ( 9.6%)
# Score: 2924.0
#
#
#=======================================
BSNT_05380___ 1 ATGAGAATTAACCACAATATCGCAGCGCTTAACACACTGAACCGTTTGTC 50
||||||||.||||||||.||.||||||||||||||.|||||||||.||||
BL03374___hag 1 ATGAGAATCAACCACAACATTGCAGCGCTTAACACGCTGAACCGTCTGTC 50
BSNT_05380___ 51 TTCAAACAACGGTGCGAGCCAAAAGAACATGGAGAAACTGTCTTCAGGTC 100
..||||||||||.||.||||||||||||||||||||.||.|||||.||||
BL03374___hag 51 AGCAAACAACGGCGCAAGCCAAAAGAACATGGAGAAGCTTTCTTCTGGTC 100
BSNT_05380___ 101 TTCGTATCAACCGTGCGGGAGATGACGCAGCGGGTCTTGCGATTTCTGAA 150
||||.|||||||||||.||||||||||||||.||||||||.||.||||||
BL03374___hag 101 TTCGCATCAACCGTGCCGGAGATGACGCAGCAGGTCTTGCAATCTCTGAA 150
BSNT_05380___ 151 AAAATGAGAGGACAAATCAGAGGTCTTGAAATGGCTTCTAAAAACTCTCA 200
||||||||||||||||||.|.||||||||||||||||||||.|||.||||
BL03374___hag 151 AAAATGAGAGGACAAATCCGCGGTCTTGAAATGGCTTCTAAGAACGCTCA 200
BSNT_05380___ 201 AGACGGAATTTCTCTTATCCAAACAGCTGAGGGTGCATTGACTGAAACTC 250
||||||.||.||||||||||||||||||||.||||||||||||||.||||
BL03374___hag 201 AGACGGCATCTCTCTTATCCAAACAGCTGAAGGTGCATTGACTGAGACTC 250
BSNT_05380___ 251 ACTCTATTCTTCAACGTGTTCGTGAACTAGTTGTTCAAGCAGGAAACACA 300
||||.||.||||||||||||||||||||||||||||||||.||||||||.
BL03374___hag 251 ACTCAATCCTTCAACGTGTTCGTGAACTAGTTGTTCAAGCTGGAAACACT 300
BSNT_05380___ 301 GGTACTCAAGATGGTACTGA--CCTTCA-AGCGATCCAAGACGAGATCAC 347
||.||.|||.| .||||| ..||.| |||.||||||||||||||||.
BL03374___hag 301 GGAACACAACA---AACTGAGGATTTAACAGCTATCCAAGACGAGATCAA 347
BSNT_05380___ 348 TTCACTTGTT----GAAGAAATCGGTGGCGGAACAAACGCTAACGGTATC 393
..|| || ||.||||| |.||||.|||
BL03374___hag 348 AGCA----TTAAAAGACGAAAT------------------TGACGGCATC 375
BSNT_05380___ 394 TCTGACCGTACTGAGTTTAACGGTAAAAAACTTCTT-AATGGCGATTTC- 441
||.||.|||||.||.||.|||||||||||| ||.|| .||||...||||
BL03374___hag 376 TCAGAACGTACGGAATTCAACGGTAAAAAA-TTGTTGGATGGTACTTTCA 424
BSNT_05380___ 442 -------------TC--GCA-----AGCTAGC-GGT---AAATCATTAAC 467
|| ||| |||| || ||| |||||.|||..
BL03374___hag 425 AAGCACCAGCAGATCCAGCAAACCCAGCT-GCAGGTGAAAAATCTTTAGT 473
BSNT_05380___ 468 ATTCCAAATCGGAGCTAA--CAGCAGTCAACAGCTTTCTGTCAACATTGA 515
.||||||||.|||||||| ||.|| |||||..|||||||.||||||||
BL03374___hag 474 TTTCCAAATTGGAGCTAACGCAACA--CAACAAATTTCTGTTAACATTGA 521
BSNT_05380___ 516 AAGCATG-GCAGCTACAGCAATTGG---------TGCTTTAGATACAGAC 555
||..||| ||| ||...|||.|.|| |.||..||||||
BL03374___hag 522 AAAAATGAGCA-CTGATGCATTAGGAGTCAAAGATCCTGCAGATAC---- 566
BSNT_05380___ 556 GGTACG------ACACTTCTTACTGGACAAGCAGTATCTGACATCGACGT 599
|||| ||.||..|.||....|||.||||....||.|||||.||
BL03374___hag 567 --TACGGGCAGAACTCTAGTAACCAACCAATCAGTTAAAGATATCGATGT 614
BSNT_05380___ 600 AACAAAATTTAAAGATAATGCGGCTGACACTGCTAC---TGTAGGATTCA 646
|||.||||||...||||||||.|| .|||||.|| ||||||.||..
BL03374___hag 615 AACTAAATTTGCTGATAATGCAGC---AACTGCAACAGATGTAGGTTTTG 661
BSNT_05380___ 647 ATGCTCAACTTAAAACAGTTGATGACGCAATCAACACAGTTTCTAAACAA 696
||.||||||||||||..||||||...||.||||||..|||.|||..||||
BL03374___hag 662 ATACTCAACTTAAAATCGTTGATTCAGCGATCAACCAAGTATCTGCACAA 711
BSNT_05380___ 697 CGTTCAAAATTAGGTGCGGTACAAAACCGTCTTGAGCACACAATCAACAA 746
|||.|.|||.|.||||||||||||||||||||.|||||||||||||||||
BL03374___hag 712 CGTGCTAAACTTGGTGCGGTACAAAACCGTCTAGAGCACACAATCAACAA 761
BSNT_05380___ 747 CTTAAGCGCTTCTGGTGAAAACCTGACTGCTGCTGAGTCTCGTATCCGTG 796
|.|..|.||||||..|||||||.||||.||||||||||||||||||||.|
BL03374___hag 762 CCTTGGTGCTTCTTCTGAAAACTTGACAGCTGCTGAGTCTCGTATCCGCG 811
BSNT_05380___ 797 ACGTTGACATGGCGAAAGAAATGAGCGAGTTCACAAAGAACAACATTCTT 846
|||||||||||||.||||||||||||||||||||||||||||||||||||
BL03374___hag 812 ACGTTGACATGGCTAAAGAAATGAGCGAGTTCACAAAGAACAACATTCTT 861
BSNT_05380___ 847 TCTCAGGCTTCTCAAGCGATGCTGGCTCAAGCAAACCAACAACCGCAAAA 896
|||||.|||||||||||.|||||.||||||||.||||||||.||||||||
BL03374___hag 862 TCTCAAGCTTCTCAAGCTATGCTTGCTCAAGCGAACCAACAGCCGCAAAA 911
BSNT_05380___ 897 CGTACTTCAATTATTACGTTAA 918
|||.|||||.||..|.||||||
BL03374___hag 912 CGTTCTTCAGTTGCTTCGTTAA 933
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