Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05382 and BL03372

See Amino acid alignment / Visit BSNT_05382 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:31
# Commandline: needle
#    -asequence dna-align/BSNT_05382___fliW.1.5803.seq
#    -bsequence dna-align/BL03372___yviF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05382___fliW-BL03372___yviF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05382___fliW-BL03372___yviF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05382___fliW
# 2: BL03372___yviF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 436
# Identity:     319/436 (73.2%)
# Similarity:   319/436 (73.2%)
# Gaps:           8/436 ( 1.8%)
# Score: 1098.0
# 
#
#=======================================

BSNT_05382___      1 ATGATCATTCATACGAAGTACCATGGCCAAATGAACATAAAAGAAGAACA     50
                     |||||||||.|.||.|||||.||.||..|||.|.|.||..|||||||.||
BL03372___yvi      1 ATGATCATTAAAACAAAGTATCACGGAGAAACGCAAATTCAAGAAGACCA     50

BSNT_05382___     51 AATCATTC-TTTTTGAAAGCGGGATTCCAGGCTTTTTAGAAGAAAAACAG     99
                     .| ||.|| |.|||.|||.|||..|.||.||.|||..||..||.||..||
BL03372___yvi     51 GA-CAATCGTGTTTAAAAACGGCCTGCCTGGATTTACAGGGGAGAAGAAG     99

BSNT_05382___    100 TTCGTCATACTTCCGCTTTCAGAAGACTCTCCATTCGTGGCACTGCAGTC    149
                     ||||||||.||.||||||||.||.||.||.||.|||||.|..||.|||||
BL03372___yvi    100 TTCGTCATCCTGCCGCTTTCCGAGGATTCGCCGTTCGTCGTCCTTCAGTC    149

BSNT_05382___    150 CGT-CACTTCAGAAAATCTTGCGTTTATCGTCGTAAGTCCGTTTATCTTT    198
                     .|| || .||.|||.|.||.||.||.||.||||..||||||||..|||||
BL03372___yvi    150 GGTGCA-GTCGGAAGAGCTGGCATTCATTGTCGCCAGTCCGTTCGTCTTT    198

BSNT_05382___    199 TTTAAGAATTATGAATTTGATCTTGATGAATCAACTGCTGAACTTTTGGA    248
                     ||.||..||||||..|||||||||||||||.|.||.|.|||||||.|.||
BL03372___yvi    199 TTCAAAGATTATGGCTTTGATCTTGATGAAACGACGGTTGAACTTCTTGA    248

BSNT_05382___    249 TATCGATAATATTC--AAGACGTAGAAGTCATGACAATATTGACTATGGC    296
                     .||||  |||.|.|  |||||||.|||||.|||.|.||.||.||.||.|.
BL03372___yvi    249 AATCG--AATCTGCCGAAGACGTTGAAGTAATGGCGATTTTAACGATCGA    296

BSNT_05382___    297 AGAGCCATTTGAAAAGTCTACTGCGAATTTATTGGCTCCCATTATTGTGA    346
                     |||||||||.||.||.||.||.||.|||||..||||.||.||..|.||||
BL03372___yvi    297 AGAGCCATTCGAGAAATCAACGGCCAATTTGATGGCGCCGATAGTGGTGA    346

BSNT_05382___    347 ATCGCAAGAACATGATGGCTAAGCAAGTCGTTTTACACGACTCCTCATAT    396
                     |.||||..||.|||.|.||.||||||||..||||.||.|||||.||.|||
BL03372___yvi    347 ACCGCAGAAAGATGCTTGCCAAGCAAGTGATTTTGCATGACTCTTCTTAT    396

BSNT_05382___    397 ACGACAAAGCATCCGATTGGAGGAGAATCATGCTAG    432
                     ..|||||||||.|||||.|||||.|||.||||||||
BL03372___yvi    397 CTGACAAAGCAGCCGATAGGAGGGGAAGCATGCTAG    432


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