Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05382 and BL03372
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:31
# Commandline: needle
# -asequence dna-align/BSNT_05382___fliW.1.5803.seq
# -bsequence dna-align/BL03372___yviF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05382___fliW-BL03372___yviF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05382___fliW-BL03372___yviF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05382___fliW
# 2: BL03372___yviF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 436
# Identity: 319/436 (73.2%)
# Similarity: 319/436 (73.2%)
# Gaps: 8/436 ( 1.8%)
# Score: 1098.0
#
#
#=======================================
BSNT_05382___ 1 ATGATCATTCATACGAAGTACCATGGCCAAATGAACATAAAAGAAGAACA 50
|||||||||.|.||.|||||.||.||..|||.|.|.||..|||||||.||
BL03372___yvi 1 ATGATCATTAAAACAAAGTATCACGGAGAAACGCAAATTCAAGAAGACCA 50
BSNT_05382___ 51 AATCATTC-TTTTTGAAAGCGGGATTCCAGGCTTTTTAGAAGAAAAACAG 99
.| ||.|| |.|||.|||.|||..|.||.||.|||..||..||.||..||
BL03372___yvi 51 GA-CAATCGTGTTTAAAAACGGCCTGCCTGGATTTACAGGGGAGAAGAAG 99
BSNT_05382___ 100 TTCGTCATACTTCCGCTTTCAGAAGACTCTCCATTCGTGGCACTGCAGTC 149
||||||||.||.||||||||.||.||.||.||.|||||.|..||.|||||
BL03372___yvi 100 TTCGTCATCCTGCCGCTTTCCGAGGATTCGCCGTTCGTCGTCCTTCAGTC 149
BSNT_05382___ 150 CGT-CACTTCAGAAAATCTTGCGTTTATCGTCGTAAGTCCGTTTATCTTT 198
.|| || .||.|||.|.||.||.||.||.||||..||||||||..|||||
BL03372___yvi 150 GGTGCA-GTCGGAAGAGCTGGCATTCATTGTCGCCAGTCCGTTCGTCTTT 198
BSNT_05382___ 199 TTTAAGAATTATGAATTTGATCTTGATGAATCAACTGCTGAACTTTTGGA 248
||.||..||||||..|||||||||||||||.|.||.|.|||||||.|.||
BL03372___yvi 199 TTCAAAGATTATGGCTTTGATCTTGATGAAACGACGGTTGAACTTCTTGA 248
BSNT_05382___ 249 TATCGATAATATTC--AAGACGTAGAAGTCATGACAATATTGACTATGGC 296
.|||| |||.|.| |||||||.|||||.|||.|.||.||.||.||.|.
BL03372___yvi 249 AATCG--AATCTGCCGAAGACGTTGAAGTAATGGCGATTTTAACGATCGA 296
BSNT_05382___ 297 AGAGCCATTTGAAAAGTCTACTGCGAATTTATTGGCTCCCATTATTGTGA 346
|||||||||.||.||.||.||.||.|||||..||||.||.||..|.||||
BL03372___yvi 297 AGAGCCATTCGAGAAATCAACGGCCAATTTGATGGCGCCGATAGTGGTGA 346
BSNT_05382___ 347 ATCGCAAGAACATGATGGCTAAGCAAGTCGTTTTACACGACTCCTCATAT 396
|.||||..||.|||.|.||.||||||||..||||.||.|||||.||.|||
BL03372___yvi 347 ACCGCAGAAAGATGCTTGCCAAGCAAGTGATTTTGCATGACTCTTCTTAT 396
BSNT_05382___ 397 ACGACAAAGCATCCGATTGGAGGAGAATCATGCTAG 432
..|||||||||.|||||.|||||.|||.||||||||
BL03372___yvi 397 CTGACAAAGCAGCCGATAGGAGGGGAAGCATGCTAG 432
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