Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05384 and BL03370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:31
# Commandline: needle
# -asequence dna-align/BSNT_05384___flgL.1.5803.seq
# -bsequence dna-align/BL03370___flgL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05384___flgL-BL03370___flgL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05384___flgL-BL03370___flgL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05384___flgL
# 2: BL03370___flgL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 935
# Identity: 653/935 (69.8%)
# Similarity: 653/935 (69.8%)
# Gaps: 61/935 ( 6.5%)
# Score: 2122.5
#
#
#=======================================
BSNT_05384___ 1 ATGAGAGTAACACAAGGCATGATACAGC--AAAACTCACTGAGATATATC 48
|||.|.|||||.|||||.||||| .|| ||||.||..||.|.||.|||
BL03370___flg 1 ATGCGGGTAACCCAAGGGATGAT--TGCAAAAAATTCTTTGCGCTACATC 48
BSNT_05384___ 49 GGTTCGAGCTACTCG-AAGCTGGATAAACTCCAGTCGCAGATTTCTTCAG 97
..|||.||||| |.| ||.||||||||.||.||.||.||||||||||| |
BL03370___flg 49 AATTCAAGCTA-TGGAAAACTGGATAAGCTTCAATCCCAGATTTCTTC-G 96
BSNT_05384___ 98 GGAAAAAA-ATCTCAAAAGCTTCCGACGATCCTGTAGTAGCAATGAAAAG 146
|||||||| |||.||||.||.|||||||||||.||.||.||.||||||||
BL03370___flg 97 GGAAAAAAGATCACAAAGGCATCCGACGATCCCGTCGTCGCGATGAAAAG 146
BSNT_05384___ 147 CTTAAAGTATAATACGCAACTGTCTCAAGTGCAGCAGTACAAAAGCAATG 196
|.|.|||||.|||||.||.|||||.||.||..|.||.||..|||||||||
BL03370___flg 147 CCTGAAGTACAATACACAGCTGTCCCAGGTTAAACAATATCAAAGCAATG 196
BSNT_05384___ 197 CCTCTCAAGCCTTTACCTGGCTCGAAAACACAGAAACAAACATTACAGAA 246
||||.|||||.|||||.|||||.||||||||.|||||.||||||||||||
BL03370___flg 197 CCTCGCAAGCTTTTACATGGCTTGAAAACACGGAAACGAACATTACAGAA 246
BSNT_05384___ 247 GGAATTGACATCTTGTCAAAGGTCAGAGAATTAGCGGTTGAAGCTCAAAA 296
||.|||||.|||.||.|.||..||||.||..|..|.|||.|.||||||||
BL03370___flg 247 GGCATTGATATCATGGCGAAAATCAGGGAGCTGACCGTTAAGGCTCAAAA 296
BSNT_05384___ 297 TGATACAAACGGCGAGGCGGAGCGGCAAGCGATTGGCGTAGAAGTAAAGC 346
...||||||||||.|||..||.....|.|||||.||.||.|||.|....|
BL03370___flg 297 CAGTACAAACGGCAAGGATGAATTAAATGCGATCGGGGTCGAAATCGGCC 346
BSNT_05384___ 347 AGTTAAAGGAACAGCTTTTAAATATTGCGAATACACAAGTGAACGGCAGA 396
|..|.||.||.|||||..|..|.||.||.|||||.||.||.||||||.|.
BL03370___flg 347 AACTGAAAGACCAGCTGATTCAGATCGCCAATACGCAGGTCAACGGCCGC 396
BSNT_05384___ 397 TATATCTTTAATGGCACAAATTCAGATAAGC----CTCCGGTTACAGATA 442
||..|.|||||.||.||.||.||.|| | |||||.|.|||.|.|
BL03370___flg 397 TACCTTTTTAACGGAACGAACTCTGA----CGTCGCTCCGATCACAAAAA 442
BSNT_05384___ 443 ACGGAGACGGAACTT----ATACAATTTCTG------ATACA------GC 476
|||..||.||.|||| ||||||||| || ||||| .|
BL03370___flg 443 ACGCCGATGGTACTTACACATACAATTT-TGAAAACTATACAAGCAGCTC 491
BSNT_05384___ 477 TGATGTCGTAGTCAATATAT---CAAA--TAATATGTCATTGAAAGTGAA 521
|||.||..|..|||||.|.| |||| .|| |.||.||.||.||
BL03370___flg 492 TGACGTTCTCATCAATGTTTCGCCAAACGCAA-----CCTTAAATGTAAA 536
BSNT_05384___ 522 TTCAGATCCAAAGTCAGCTTTTGGAGG-CACTTCTGAA--AGCGGGCAAA 568
.|||.||||.|..||.|||||.||.|| || .|.|| |||||.||||
BL03370___flg 537 CTCAAATCCGATTTCGGCTTTCGGCGGACA---ATCAAGCAGCGGACAAA 583
BSNT_05384___ 569 ATGTATTTGAAATGCTTGATTCTTTTGAGAAAGCACTAAATTCTGGTTCG 618
|.||.|||||||||.||||.|||.|.||.||.||..||||..|.||..|.
BL03370___flg 584 ACGTCTTTGAAATGATTGAGTCTCTCGAAAATGCCTTAAAAGCGGGAACA 633
BSNT_05384___ 619 CTAGATGGCATGGACAATG---TTTTAGATGATATTGATCATTTTTCTGA 665
.|.||.||.|||||.||.| |||.| ||.|||||.||.||.||..|
BL03370___flg 634 ATGGAAGGAATGGAAAACGCCCTTTCA---GACATTGACCAGTTCTCCAA 680
BSNT_05384___ 666 -CGGCATGAGTGCTGAACGATCTGATCTTGGAGCGAGATATAATCGTCTT 714
|.| |||||...|||.||.||||||.|.||||||.|.||.||.||.||.
BL03370___flg 681 TCAG-ATGAGCAATGAGCGGTCTGATATCGGAGCGCGCTACAACCGGCTC 729
BSNT_05384___ 715 GAACTGGTTAATACGAGACTGTCAGCG--CAAGAAGAAACAGCTACCAAA 762
|||.||.|.|||.||.|.||| |||| ||.|||||.||.||.||.||.
BL03370___flg 730 GAATTGATCAATGCGCGGCTG--AGCGAACAGGAAGAGACGGCGACAAAG 777
BSNT_05384___ 763 GTGTTATCAGACAATGAAGATGTAGAACTGGAAGAGGTAATAACTGAATT 812
||.||.||||||||.||||||||.||.||.||.|||.|.||.||||||||
BL03370___flg 778 GTATTGTCAGACAACGAAGATGTTGAGCTTGAGGAGATCATTACTGAATT 827
BSNT_05384___ 813 TATTGCGCAGCAAAGTGTGCACAGGGCTACTCTGGCCGTTAATGCGCAAA 862
||||.|.||||||...||.|||||.|||.|.||.|||||.||||||.|||
BL03370___flg 828 TATTACACAGCAATCGGTTCACAGAGCTGCACTTGCCGTAAATGCGAAAA 877
BSNT_05384___ 863 TTGTTCAGCCTACATTGATTGACTTTTTAAAGTAA 897
|.||||||||.|||.||.||||||||||||..|||
BL03370___flg 878 TCGTTCAGCCGACACTGGTTGACTTTTTAAGATAA 912
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