Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05387 and BL03367

See Amino acid alignment / Visit BSNT_05387 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:31
# Commandline: needle
#    -asequence dna-align/BSNT_05387___flgM.1.5803.seq
#    -bsequence dna-align/BL03367___flgM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05387___flgM-BL03367___flgM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05387___flgM-BL03367___flgM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05387___flgM
# 2: BL03367___flgM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     190/294 (64.6%)
# Similarity:   190/294 (64.6%)
# Gaps:          54/294 (18.4%)
# Score: 599.5
# 
#
#=======================================

BSNT_05387___      1 ATGAAAATCAATCAATTTGGAACACAATCCGTTAATCCATATCA-AAAAA     49
                     |||||.|||||.||||.||||||||||.|.||||||||.||||| |||..
BL03367___flg      1 ATGAAGATCAACCAATATGGAACACAACCTGTTAATCCTTATCATAAATC     50

BSNT_05387___     50 ATTATGATAAGCAAGC-------------GGTGCAAAAAACTGCTGCACA     86
                     ||| |||.||.|||.|             ||.|||          ||.||
BL03367___flg     51 ATT-TGAAAAACAAACAGCTTCTTCACAGGGAGCA----------GCCCA     89

BSNT_05387___     87 GCCTCAAGATAAAATTGAAATTTCATCACAGGCTAAAGAAATGCAACATG    136
                     |||..||||.|||.||||.|||||..|..|.||.||.||..|||||.|  
BL03367___flg     90 GCCGGAAGACAAAGTTGAGATTTCCGCGAAAGCAAAGGAGCTGCAAAA--    137

BSNT_05387___    137 CATCCGACGCAGTCACTGGTTCA---------CGACAGGAAAAAATTGCG    177
                               ||.|.|||.||.|         ||.|||||.||||||||.
BL03367___flg    138 ----------AGGCCCTGATTTAATGAAGGAGCGTCAGGAGAAAATTGCC    177

BSNT_05387___    178 CAGCTTAAAGC-GCAAATTGAAAACGGGTCATACAAAGTAGAC-GCAAA-    224
                     |||||.||||| || ..|.||.||.||..|.||||||||.||| ||||| 
BL03367___flg    178 CAGCTGAAAGCAGC-CGTGGAGAATGGAACGTACAAAGTTGACGGCAAAG    226

BSNT_05387___    225 TCATATCGC-GAAAAATATAATTAATTTTTATAAAAAGCAATAA    267
                     .||||  || |||||| ||..|.||||||||||||.||||||||
BL03367___flg    227 GCATA--GCTGAAAAA-ATGGTCAATTTTTATAAACAGCAATAA    267


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