Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05394 and BL03361
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:32
# Commandline: needle
# -asequence dna-align/BSNT_05394___degU.1.5803.seq
# -bsequence dna-align/BL03361___degU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05394___degU-BL03361___degU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05394___degU-BL03361___degU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05394___degU
# 2: BL03361___degU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 690
# Identity: 577/690 (83.6%)
# Similarity: 577/690 (83.6%)
# Gaps: 0/690 ( 0.0%)
# Score: 2433.0
#
#
#=======================================
BSNT_05394___ 1 GTGACTAAAGTAAACATTGTTATTATCGACGACCATCAGTTATTTCGTGA 50
||||||||||||||.|||||.|||||.|||||.|||||||||||.|||||
BL03361___deg 1 GTGACTAAAGTAAATATTGTAATTATTGACGATCATCAGTTATTCCGTGA 50
BSNT_05394___ 51 AGGTGTTAAACGGATATTGGATTTTGAACCTACCTTTGAAGTGGTAGCCG 100
||||||.||||||||.||||||||.||||||||||||||.||.||.||||
BL03361___deg 51 AGGTGTCAAACGGATTTTGGATTTCGAACCTACCTTTGAGGTAGTGGCCG 100
BSNT_05394___ 101 AAGGTGATGACGGGGACGAAGCGGCTCGTATTGTTGAGCACTATCATCCT 150
||||.||.|||||.||.|||||||||||.|||||.||||||||.||||||
BL03361___deg 101 AAGGAGACGACGGAGATGAAGCGGCTCGCATTGTCGAGCACTACCATCCT 150
BSNT_05394___ 151 GATGTTGTGATCATGGATATCAATATGCCAAACGTAAATGGTGTGGAAGC 200
||||||||.|||||||||||.||||||||.||.||.||.||.||.|||||
BL03361___deg 151 GATGTTGTTATCATGGATATTAATATGCCGAATGTGAACGGAGTAGAAGC 200
BSNT_05394___ 201 TACAAAACAGCTTGTAGAGCTGTATCCTGAATCTAAAGTAATTATTCTAT 250
.||||||||.||.||.||..|||||||.|||||.||.||.||||||.|||
BL03361___deg 201 GACAAAACAACTGGTCGACTTGTATCCGGAATCAAAGGTTATTATTTTAT 250
BSNT_05394___ 251 CAATTCACGATGACGAAAATTATGTAACACATGCCCTGAAAACAGGTGCA 300
|.||.||.|||||||||||.|||||.||||||||..|.||||||||.||.
BL03361___deg 251 CCATCCATGATGACGAAAACTATGTTACACATGCATTAAAAACAGGAGCC 300
BSNT_05394___ 301 AGAGGTTATCTGCTGAAAGAGATGGATGCTGATACATTAATTGAAGCGGT 350
.|.||.||||||||||||||.||||||||.|||||..|.||.|||||.||
BL03361___deg 301 CGGGGCTATCTGCTGAAAGAAATGGATGCCGATACGCTGATCGAAGCCGT 350
BSNT_05394___ 351 TAAAGTAGTGGCTGAGGGCGGATCTTACCTTCATCCGAAGGTTACTCACA 400
.||||||||.|||||.|||||||||||.||.|||||.||||||||.||||
BL03361___deg 351 GAAAGTAGTAGCTGAAGGCGGATCTTATCTGCATCCTAAGGTTACACACA 400
BSNT_05394___ 401 ACCTCGTTAACGAATTCCGCCGCCTTGCAACAAGCGGAGTTTCTGCACAC 450
|.||.||.||.|||||||||||.||||||||||||||.||.||..|.|||
BL03361___deg 401 ATCTTGTGAATGAATTCCGCCGTCTTGCAACAAGCGGTGTATCATCTCAC 450
BSNT_05394___ 451 CCTCAACATGAGGTTTACCCTGAAATCCGCAGACCATTACATATTTTAAC 500
.||||.||||||||.||.||.||||||||.|||||..|.||.|||.|.||
BL03361___deg 451 GCTCAGCATGAGGTGTATCCGGAAATCCGGAGACCTCTTCACATTCTCAC 500
BSNT_05394___ 501 TAGGCGGGAATGTGAAGTGCTGCAGATGCTTGCAGACGGAAAAAGCAACC 550
.||..|||||||.||.||.|||||||||||.||.||.|||||||||||||
BL03361___deg 501 AAGAAGGGAATGCGAGGTACTGCAGATGCTGGCGGATGGAAAAAGCAACC 550
BSNT_05394___ 551 GCGGAATTGGTGAATCATTGTTTATCAGTGAGAAAACCGTTAAAAACCAT 600
|||||||.||.||||||||.|||||||||||.|||||.||||||||||||
BL03361___deg 551 GCGGAATCGGCGAATCATTATTTATCAGTGAAAAAACGGTTAAAAACCAT 600
BSNT_05394___ 601 GTCAGCAATATTTTACAAAAAATCAATGTAAACGACCGGACGCAAGCCGT 650
||||||||.||..|.||||||||.||||||||||||.|.|||||.||.||
BL03361___deg 601 GTCAGCAACATCCTTCAAAAAATGAATGTAAACGACAGAACGCAGGCTGT 650
BSNT_05394___ 651 TGTGGTCGCCATTAAAAATGGCTGGGTAGAAATGAGATAG 690
|||.||.|||||||||||.||||||||||||||||||||.
BL03361___deg 651 TGTTGTAGCCATTAAAAACGGCTGGGTAGAAATGAGATAA 690
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