Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05395 and BL03360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:32
# Commandline: needle
# -asequence dna-align/BSNT_05395___degS.1.5803.seq
# -bsequence dna-align/BL03360___degS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05395___degS-BL03360___degS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05395___degS-BL03360___degS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05395___degS
# 2: BL03360___degS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1171
# Identity: 893/1171 (76.3%)
# Similarity: 893/1171 (76.3%)
# Gaps: 26/1171 ( 2.2%)
# Score: 3311.0
#
#
#=======================================
BSNT_05395___ 1 ATGA----ATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGA 46
.||| .| |.||.|||||.||||||||..|.|||||.||..|.|
BL03360___deg 1 GTGAGCGTTT----CCAAAATGGACTCCAAAGTTTTAGATTCAATCATTA 46
BSNT_05395___ 47 TGAAGATGCTGAAAACCGTTGACGGGAGCAAGGACGAAGTTTTTCAAATC 96
||||||||.|.|||||.|||||||||||||||||.|||||.|||||||||
BL03360___deg 47 TGAAGATGTTAAAAACGGTTGACGGGAGCAAGGATGAAGTCTTTCAAATC 96
BSNT_05395___ 97 GGGGAGCAGTCACGCCAGCAGTATGAACAGC-TGGTCGAAGAACTGAAAC 145
||.||||||||.||||||||.||.||| .|| ||||.|||||.|||||||
BL03360___deg 97 GGAGAGCAGTCCCGCCAGCAATACGAA-GGCTTGGTAGAAGAGCTGAAAC 145
BSNT_05395___ 146 AAATTAAACAGCAGGTGTATGAAGTGATCGAGCTTGGCGATAAACTTGAA 195
|.||||||||||||||..|.|||||.|||||.|||||.||.|..||.|||
BL03360___deg 146 AGATTAAACAGCAGGTCAACGAAGTCATCGATCTTGGAGACAGGCTGGAA 195
BSNT_05395___ 196 GTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGTAATTT 245
|||||..|||||||||||.|.|||||.||.||.|||||||||.|.||.||
BL03360___deg 196 GTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGAAACTT 245
BSNT_05395___ 246 TCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATA 295
|||||.||||||||||||.||.||.|||.|.|||||||||||||||||.|
BL03360___deg 246 TCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACA 295
BSNT_05395___ 296 AGCTGCAGGTAGAATTGACGATGATCCAGCAGCGTGAGAAGCAATTGCGC 345
|.||||||||.|||.||||.||||||||||||||.||.|||||..||.|.
BL03360___deg 296 AACTGCAGGTTGAACTGACAATGATCCAGCAGCGGGAAAAGCAGCTGAGA 345
BSNT_05395___ 346 GAACGGCGGGACGATTTGGA---GCGCAGATTGCTAGGGCTTCAGGAAAT 392
||...|||.||.|||.|||| ||||...||| ||||||||||||||
BL03360___deg 346 GAGAAGCGTGATGATCTGGAACGGCGCCTTTTG---GGGCTTCAGGAAAT 392
BSNT_05395___ 393 CATTGAGCGGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACT 442
|||.|||||.||||||....|.||.||.||.|||||.||.||..|.||||
BL03360___deg 393 CATCGAGCGTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACT 442
BSNT_05395___ 443 ACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTTGCTGATGCTCAG 492
||||.|||||||||.|||||.|.||.||..|.||.||||..|||||.|||
BL03360___deg 443 ACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTTGAAGATGCGCAG 492
BSNT_05395___ 493 GCAAAACAGGATTTCGGCTTAAGGATTATTGAGGCGCAGGAAGAAGAGCG 542
||.||.|||||||||||..|..|||||||.||.||.|||||.|||||..|
BL03360___deg 493 GCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAG 542
BSNT_05395___ 543 AAAAAGAGTCTCAAGAGAAATCCATGACGGACCCGCTCAAATGCTGGCGA 592
||||||.||||||||.|||||.||.|||||.||.||.|||||||||||.|
BL03360___deg 543 AAAAAGGGTCTCAAGGGAAATTCACGACGGTCCTGCGCAAATGCTGGCCA 592
BSNT_05395___ 593 ATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGGGC 642
|.||||||||||||||.|||.|.|||||.||.||.|||.|.|||...||.
BL03360___deg 593 ACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAGGA 642
BSNT_05395___ 643 GCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAA 692
.||||.||.||.||.||.|||||||||||.||.||.|||||.||..|.||
BL03360___deg 643 ACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAA 692
BSNT_05395___ 693 TGCCCTTTACGAAGTGAGAAGGATTATATATGATTTAAGACCGATGGCCC 742
|||.|||||.|||||.|||||.||.||.|||||||||||.||||||||..
BL03360___deg 693 TGCTCTTTATGAAGTCAGAAGAATCATTTATGATTTAAGGCCGATGGCTT 742
BSNT_05395___ 743 TTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACC 792
|.||.||..|.||..||||.||.||..|.||||||||..|..|.||.|.|
BL03360___deg 743 TAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATC 792
BSNT_05395___ 793 GAGGAATATAACGGGAAGGTCAAA-ATACATTTTCAGTGCATTGGAGAAA 841
||.||.|||.|.||.||.| |||| ||.|||||.||.|||||.||||||.
BL03360___deg 793 GAAGATTATCATGGAAAAG-CAAAGATTCATTTCCAATGCATCGGAGAAT 841
BSNT_05395___ 842 CAGAGGATCAG-AGGCTAGCGCCTCAGTTTGAGGTTGCGCTCTTCAGGCT 890
|.||.|| .|| ||..||||.||.|.||||||||||||.||.|||.||||
BL03360___deg 842 CCGAAGA-AAGAAGAATAGCACCGCGGTTTGAGGTTGCACTATTCCGGCT 890
BSNT_05395___ 891 CGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAA--GA 938
.|||||||||||.|||.|.||.||..||||.||.||.||||| || ||
BL03360___deg 891 TGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATC--AACTGA 938
BSNT_05395___ 939 AATTACA-GTCAAAGTTGAGATCACAAAGGATTTTGTGATTTTAATGATA 987
|||| || ||.|||||.||..|.|||||.||||||||||...|.||.||.
BL03360___deg 939 AATT-CATGTTAAAGTAGAAGTGACAAAAGATTTTGTGACGCTGATTATC 987
BSNT_05395___ 988 AAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAA 1037
|||||.||.||.||.||.||.|||.|.||.||||..||||..|||||.||
BL03360___deg 988 AAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAA 1037
BSNT_05395___ 1038 CAAATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAG 1087
||||||.|||||..||||.||.||||||||||||||.|||||..|.||||
BL03360___deg 1038 CAAATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAG 1087
BSNT_05395___ 1088 GAACGATGACAATAGATTCGAAAATAGGTCTTGGGACATTTATTATGATT 1137
|..|.||||||||.|||||||||||||||||||||||||||||..|||||
BL03360___deg 1088 GCTCAATGACAATCGATTCGAAAATAGGTCTTGGGACATTTATATTGATT 1137
BSNT_05395___ 1138 AAGGTTCCGTTATCTCTTTGA 1158
||.|||||..|.|||.|.|.|
BL03360___deg 1138 AAAGTTCCACTGTCTTTGTAA 1158
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