Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05407 and BL03358
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:32
# Commandline: needle
# -asequence dna-align/BSNT_05407___tagO.1.5803.seq
# -bsequence dna-align/BL03358___tagO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05407___tagO-BL03358___tagO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05407___tagO-BL03358___tagO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05407___tagO
# 2: BL03358___tagO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1098
# Identity: 779/1098 (70.9%)
# Similarity: 779/1098 (70.9%)
# Gaps: 54/1098 ( 4.9%)
# Score: 2646.5
#
#
#=======================================
BSNT_05407___ 1 ATG-CTTGACGAACGCATGATTCGCATTGTTGTTGCGTTTATTGTCTCGC 49
||| ||| |||| .||||.|||..||||||||.|||||||.|
BL03358___tag 1 ATGTCTT---------ATGA-ACGCACTGTAATTGCGTTTTTTGTCTCTC 40
BSNT_05407___ 50 TGCTGACAGTTTTAATCATAACCCCAATCGTAAAAAGGATTGCGATTAAA 99
|..|.||.||||||||.||.||.||..|.||.|||.|..|.||.||.|||
BL03358___tag 41 TCATTACTGTTTTAATTATTACTCCGCTTGTCAAACGTCTAGCAATCAAA 90
BSNT_05407___ 100 ATAGGTGCAGTTGACCAGCCCAGCAATCGAAAAGTACATGACAAAATCAT 149
...||.|..||.||.|||||....||.|||||..|||||||.|||.|.||
BL03358___tag 91 TCCGGGGTCGTGGATCAGCCGGATAAACGAAAGATACATGATAAAGTAAT 140
BSNT_05407___ 150 GCCCCGCATGGGCGGGCTGGCCATATTTATCGGGGT-------GGTTGCA 192
|||..|.||||||||..|.|||||.|||||.||.|| ||||
BL03358___tag 141 GCCGAGAATGGGCGGTTTAGCCATTTTTATAGGAGTATTGACCGGTT--- 187
BSNT_05407___ 193 GGCGTGCTTGCATCCGGTATTTACACAGAAACAAGGATGACGGCAATTAC 242
||| ||||...|||..|||| .||||..||.||.||.||||||||
BL03358___tag 188 --CGT--TTGCCGGCGGCCTTTA---TGAAAACAGAATAACAGCAATTAC 230
BSNT_05407___ 243 AGTCGGAGCATTCATCATTATTGTGTTAGGTATTCTTGACGATAAATATC 292
|.||||.||.||.||.||..|..|.|||||.|||.|.||.||.||||| |
BL03358___tag 231 ACTCGGTGCTTTTATGATCGTAATTTTAGGCATTGTAGATGACAAATA-C 279
BSNT_05407___ 293 AA-TTAAGTGCAAAAGTTAAGTTTTTGATTCAATTAGGTGTAGCCATTAT 341
|| |||||.||.|.|.||||.|||.|..|.|||.||...||||||...||
BL03358___tag 280 AATTTAAGCGCGAGAATTAAATTTATCGTACAAGTATTAGTAGCCTGCAT 329
BSNT_05407___ 342 GGTTGTAAGCACTGGCTTAAAAATGGACTTTTTCTCAGTACCTTTTTTAA 391
..|.||.||.||.|||||.||||||||.|||||.||..|.||.||||
BL03358___tag 330 CATCGTCAGTACAGGCTTGAAAATGGAATTTTTATCGATTCCGTTTT--- 376
BSNT_05407___ 392 CAGAA----CGATTTGAGTTAGGATGGATGGCTTATCCGCTGACGGTATT 437
.|.| ||.|||||.||.||.|||.|.||.||.|||.|||||.|.||
BL03358___tag 377 -GGGATCTTCGCTTTGATTTGGGGTGGCTCGCATACCCGTTGACGATTTT 425
BSNT_05407___ 438 ATGGATTGTCGGCATCACGAACGCAATTAACCTGATTGATGGATTGGATG 487
.|||||.|||||.|||||.||.||.||.||..|.||.||.||||||||.|
BL03358___tag 426 GTGGATCGTCGGGATCACCAATGCCATCAATTTAATCGACGGATTGGACG 475
BSNT_05407___ 488 GCCTTGCTGCCGGTCTTTCTGTTATCGGCCTGTCAACGATCGCTGTCATG 537
|.||.|||||.|||.|.||.||.||||||||.||.|||||.||.||||||
BL03358___tag 476 GACTGGCTGCGGGTATATCCGTCATCGGCCTCTCGACGATTGCCGTCATG 525
BSNT_05407___ 538 GCGCTATCCGGCGGAAAA---GTGCTCATTC----TGTCACTCTCATTAG 580
|||.|.||.|.||..||| .||.|| ||| ||||.| |.|
BL03358___tag 526 GCGTTTTCTGCCGATAAAATCTTGATC-TTCTCTTTGTCGC------TGG 568
BSNT_05407___ 581 TCGTTATTGCCAGCACGCTGGGGTTTTTGTTTTACAACTTCCACCCGGCA 630
|.||.||.|..||||||.|.||.|||.||||.|||||||||||||||||.
BL03358___tag 569 TAGTCATCGGAAGCACGGTCGGCTTTCTGTTCTACAACTTCCACCCGGCG 618
BSNT_05407___ 631 AAAATCTTTATGGGAGATACGGGATCACTTTTTTTAGGGTATAGT-ATTT 679
|||||.|||||||||||.|||||.||.||.|||||.||.||| || ||.|
BL03358___tag 619 AAAATTTTTATGGGAGACACGGGCTCGCTGTTTTTGGGCTAT-GTGATCT 667
BSNT_05407___ 680 CGATTCTTTCATTATTAGGCCTGTATAAAAGTGTCACATTGTTCAGTATC 729
||.||||.||..|..|.||.|||||||||||.||.||..|||||||..||
BL03358___tag 668 CGGTTCTGTCGCTGCTGGGGCTGTATAAAAGCGTGACTCTGTTCAGCGTC 717
BSNT_05407___ 730 GTTATCCCGATTATTATATTAGGCGTACCGATTTTTGATACAACATTTGC 779
||.||||||||||||||||||||.||.|||||.|||||.||.||||||||
BL03358___tag 718 GTCATCCCGATTATTATATTAGGAGTGCCGATATTTGACACGACATTTGC 767
BSNT_05407___ 780 TATCATCAGGAGAATATTAAACAAACAGCCGATTTCAGCGCCTGATAAGT 829
.|||||||||.|.||.||||||||.|||||||||||.||.||.|||||.|
BL03358___tag 768 GATCATCAGGCGGATTTTAAACAAGCAGCCGATTTCGGCTCCCGATAAAT 817
BSNT_05407___ 830 CGCATATTCACCATAGACTGATGGCCTTTGGCCTTTCACATCGGATGTCA 879
|||||||||||||.||.|||||||||||.|||||.||.|||||||...|.
BL03358___tag 818 CGCATATTCACCACAGGCTGATGGCCTTCGGCCTGTCCCATCGGAAAGCC 867
BSNT_05407___ 880 GTCTTAGTTATTTATTTGATTGGATTTATTTTCAGTATCAGTGCGATTGT 929
||..|.||.||||||||.||.||..|..|.|||||..|.||.||.|||.|
BL03358___tag 868 GTTATCGTCATTTATTTAATCGGCGTCGTCTTCAGCCTGAGCGCCATTCT 917
BSNT_05407___ 930 GCTTAAAAGTGCCACAATTTGGCTTTCTTTGTTTATTATCTTCATTTTAA 979
..|.||||..||.||..|.|||.|.||..|.||.||.||||||...||||
BL03358___tag 918 TTTAAAAACCGCAACCCTATGGGTGTCCATCTTCATCATCTTCGGCTTAA 967
BSNT_05407___ 980 TCATTTTTATGCAGATCATAGCAGAAGTGACAGGACTCGTAAATGAAAAA 1029
|..|.||.|||||||||||.|||||.||||||||.||.||||||||..|.
BL03358___tag 968 TACTGTTCATGCAGATCATCGCAGAGGTGACAGGCCTTGTAAATGAGCAG 1017
BSNT_05407___ 1030 TTTAAGCCGTTTACGAAGTTTTATAAACGTCTGGTGAAAAGGAATTAA 1077
|..|||||.||||||||||||||.|..||..|||||||.|||||||||
BL03358___tag 1018 TACAAGCCTTTTACGAAGTTTTACAGGCGGATGGTGAAGAGGAATTAA 1065
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