Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05412 and BL03356

See Amino acid alignment / Visit BSNT_05412 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:32
# Commandline: needle
#    -asequence dna-align/BSNT_05412___tuaG.1.5803.seq
#    -bsequence dna-align/BL03356___tuaG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05412___tuaG-BL03356___tuaG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05412___tuaG-BL03356___tuaG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05412___tuaG
# 2: BL03356___tuaG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 759
# Identity:     698/759 (92.0%)
# Similarity:   698/759 (92.0%)
# Gaps:           0/759 ( 0.0%)
# Score: 3246.0
# 
#
#=======================================

BSNT_05412___      1 ATGACGAGGCAAAAACCTTTAATCTCTGTCATTACGCCTTCCTATAACGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL03356___tua      1 ATGACGAGGCAAAAACCTTTAATCTCTGTCATTACGCCTTCCTATAACGC     50

BSNT_05412___     51 GGAGGAATATATCGAAAAAACCATTCAGTCCGTCTTAAATCAGACGTTTT    100
                     ||||||||.||||||||||||||||.||||||||||||||||||||||||
BL03356___tua     51 GGAGGAATTTATCGAAAAAACCATTAAGTCCGTCTTAAATCAGACGTTTT    100

BSNT_05412___    101 CCGACTGGGAAATGATTATTGCGGATGATTGCTCAACAGATGGGACAAGA    150
                     ||||||||||||||||.|||||.|||||||||||||||||||||||||||
BL03356___tua    101 CCGACTGGGAAATGATCATTGCCGATGATTGCTCAACAGATGGGACAAGA    150

BSNT_05412___    151 GACATTTTGAAGCGCTATGAAGAAGATGATGACCGGATCCATGCTATTTT    200
                     ||||||||||||||||||||||||||||||||.|||||||||||.|||||
BL03356___tua    151 GACATTTTGAAGCGCTATGAAGAAGATGATGAGCGGATCCATGCCATTTT    200

BSNT_05412___    201 TCTGAAAGAAAATCAAGGTGCTGCAGCTGCACGAAATGCGGCGCTCAGCA    250
                     |||||||||.|||||||||||||||||.||.|||||||||||||||||||
BL03356___tua    201 TCTGAAAGAGAATCAAGGTGCTGCAGCGGCGCGAAATGCGGCGCTCAGCA    250

BSNT_05412___    251 AAGCCGAAGGGCACTATGTCGCATTTTTGGACAGCGATGATGTATGGAAA    300
                     ||||||||||||.|||||||||.||||||||||||||||||||.||||||
BL03356___tua    251 AAGCCGAAGGGCGCTATGTCGCCTTTTTGGACAGCGATGATGTTTGGAAA    300

BSNT_05412___    301 GCAGAAAAGCTGGAAAAGCAGCTTGCCTTCATGAGGAAGCATCAGCATGC    350
                     ||||||||||||||.||||||||.|||||||||||.||||||||||||||
BL03356___tua    301 GCAGAAAAGCTGGATAAGCAGCTCGCCTTCATGAGAAAGCATCAGCATGC    350

BSNT_05412___    351 TTTCACATTTACGGCATACGAGCTGATCAGCCAAGACGGCAAACCACTTC    400
                     ||||.|||||||||||||||||||||||||||||||||||.||||.||||
BL03356___tua    351 TTTCTCATTTACGGCATACGAGCTGATCAGCCAAGACGGCGAACCGCTTC    400

BSNT_05412___    401 ATAAAACCATTCATGCACCCATGAGCCTTACATATGATGATGTATTAAAA    450
                     ||||||||||||||||||||.|.|||||||||||||||||||||||||||
BL03356___tua    401 ATAAAACCATTCATGCACCCGTAAGCCTTACATATGATGATGTATTAAAA    450

BSNT_05412___    451 AATACGATTATTGGTTGCTTGACGGTAATGATTGACAGGGAGCAAACCGG    500
                     ||||||||.||.||.|||||||||||.|||||||||||.||.|||||.||
BL03356___tua    451 AATACGATCATCGGCTGCTTGACGGTGATGATTGACAGAGAACAAACGGG    500

BSNT_05412___    501 TGATATCCGTATGCCGAATATTAGAACCCGTCAGGATTTGGCGACATGGT    550
                     |||||||||.||||||||||||||||||||.||||||||||||||||||.
BL03356___tua    501 TGATATCCGGATGCCGAATATTAGAACCCGCCAGGATTTGGCGACATGGC    550

BSNT_05412___    551 TATCCGTATTAAAGCGGGGATTCAAGGCATACGGACTGAACGAACCCCTC    600
                     |.|||||||||||||||||.|||||||||||.||||||||||||||||||
BL03356___tua    551 TGTCCGTATTAAAGCGGGGGTTCAAGGCATATGGACTGAACGAACCCCTC    600

BSNT_05412___    601 GCCGAATACCGCATCGTTGAAACATCGATTTCCAGCAACAAATGGAAGGC    650
                     ||.||||||||||||||||||||||||||.|||||.|||||.||||||||
BL03356___tua    601 GCGGAATACCGCATCGTTGAAACATCGATCTCCAGAAACAAGTGGAAGGC    650

BSNT_05412___    651 TGCGAAAAAAACGTGGTTTGTCTACAGGGAGATCGAACGGCTTCATTTTA    700
                     .|||..||||||.||||..||.||||||||.||||||||.|||||.||.|
BL03356___tua    651 GGCGCGAAAAACCTGGTACGTATACAGGGAAATCGAACGACTTCACTTGA    700

BSNT_05412___    701 TGAAAGCAACATGGTGTTTTGTTCAATATGCAAAAAACGCGGTGAAAAAA    750
                     |||||||.||||||||.|||.|.||.||.||.||.|||||.||.|..|||
BL03356___tua    701 TGAAAGCGACATGGTGCTTTTTCCATTACGCTAAGAACGCAGTAATGAAA    750

BSNT_05412___    751 AGATTATAG    759
                     ||||||||.
BL03356___tua    751 AGATTATAA    759


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