Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05418 and BL03352
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:33
# Commandline: needle
# -asequence dna-align/BSNT_05418___tuaD.1.5803.seq
# -bsequence dna-align/BL03352___tuaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05418___tuaD-BL03352___tuaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05418___tuaD-BL03352___tuaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05418___tuaD
# 2: BL03352___tuaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1335
# Identity: 1238/1335 (92.7%)
# Similarity: 1238/1335 (92.7%)
# Gaps: 3/1335 ( 0.2%)
# Score: 5814.0
#
#
#=======================================
BSNT_05418___ 1 ATGTTGAAAAGAATTGCTGTCATTGGGACGGGATATGTCGGGCTGGTGTC 50
|||||||||||.|||||||||||.|||||||||||||||||||||||
BL03352___tua 1 ---TTGAAAAGAATCGCTGTCATTGGAACGGGATATGTCGGGCTGGTGTC 47
BSNT_05418___ 51 TGGAACTTGTTTTGCTGAAGTGGGAAACTCAGTTGTCTGCTGTGATATCG 100
|||||||||||||||.||||||||||||||.|||||||||||.|||||.|
BL03352___tua 48 TGGAACTTGTTTTGCCGAAGTGGGAAACTCGGTTGTCTGCTGCGATATTG 97
BSNT_05418___ 101 ACGCTGAAAAAATAAGAGGACTCTTAGCCGGAGTAATGCCGATTTATGAG 150
|.||||||||||||||||||||||.|||||||||.||||||||||||||.
BL03352___tua 98 ATGCTGAAAAAATAAGAGGACTCTCAGCCGGAGTGATGCCGATTTATGAA 147
BSNT_05418___ 151 AACGGCCTAAAAGAGCTTGTGGATAAAAACGTAAACGAAAATCGCTTATT 200
||||||||||||||.|||||||||||||||||||||||||||||||||||
BL03352___tua 148 AACGGCCTAAAAGAACTTGTGGATAAAAACGTAAACGAAAATCGCTTATT 197
BSNT_05418___ 201 TTTCTCTACTGATATTCCAAAAGCGATTGAAGAAGCTGAGATTATTTATA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BL03352___tua 198 TTTCTCTACTGATATTCCAAAAGCGATTGAAGAAGCTGAGATTATTTATA 247
BSNT_05418___ 251 TTGCAGTCGGAACACCGATGTCGGAAACAGGGGAAGCAGATCTGACATTT 300
||||||||||.||||||||||||||||||||||||||.||||||||||||
BL03352___tua 248 TTGCAGTCGGTACACCGATGTCGGAAACAGGGGAAGCGGATCTGACATTT 297
BSNT_05418___ 301 GTTAAATCTGTTGCCGAAATGATCGGAAAGCATCTGAACGGCTATAAAGT 350
||||||||.|||||||||||||||||.|||||.|||||||||||||||||
BL03352___tua 298 GTTAAATCCGTTGCCGAAATGATCGGGAAGCACCTGAACGGCTATAAAGT 347
BSNT_05418___ 351 CATCGTCAACAAAAGCACTGTCCCTGTTGGCACTGGAAAGCTCATACAAG 400
||||||||||||||||||||||||||||||.||.|||||||||.||||||
BL03352___tua 348 CATCGTCAACAAAAGCACTGTCCCTGTTGGAACAGGAAAGCTCGTACAAG 397
BSNT_05418___ 401 GTATCATACAACGTATTTCAAAAGGAGAAGTTCCTTTCGACGTCGTTTCG 450
..||.|||.||||.|.|||||||||.|||.|.||||||||||||||.|||
BL03352___tua 398 CCATTATAGAACGCAATTCAAAAGGGGAATTCCCTTTCGACGTCGTGTCG 447
BSNT_05418___ 451 AATCCCGAATTCCTTCGTGAAGGAACAGCTATTTACGATACGATGAATAT 500
|||||.||||||||||||||||||||||||||||||||||||||||||||
BL03352___tua 448 AATCCGGAATTCCTTCGTGAAGGAACAGCTATTTACGATACGATGAATAT 497
BSNT_05418___ 501 GGAAAGAGCCGTCATCGGCGCGACAAGCGAAAGGGCTGCTGCGATAATTG 550
|||||||||.||||||||||||||||||||||.|||||||||.||.||||
BL03352___tua 498 GGAAAGAGCAGTCATCGGCGCGACAAGCGAAAAGGCTGCTGCCATTATTG 547
BSNT_05418___ 551 AAGAACTTCATAAGCCTTTTCAAACGAAAATTGTCAAGTCTAACCTTGAA 600
||||.|||||||||||.||||||||||||||.||||||||||||||||||
BL03352___tua 548 AAGAGCTTCATAAGCCATTTCAAACGAAAATCGTCAAGTCTAACCTTGAA 597
BSNT_05418___ 601 AGTGCAGAAATGATTAAATATGCTGCAAATGCATTTTTGGCTACAAAGAT 650
||||||||||||||||||||.|||||||||||||||||||||||||||||
BL03352___tua 598 AGTGCAGAAATGATTAAATACGCTGCAAATGCATTTTTGGCTACAAAGAT 647
BSNT_05418___ 651 CTCGTTCATTAATGATATCGCGAATATTTGCGAAAGAGTCGGAGCTGACG 700
||||||||||||||||||||||||||||||||||||.|||||||||||.|
BL03352___tua 648 CTCGTTCATTAATGATATCGCGAATATTTGCGAAAGGGTCGGAGCTGATG 697
BSNT_05418___ 701 TATCAAAGGTGTCTGAAGGTGTCGGACTCGACAGCAGAATCGGCAATAAA 750
||||.||||||||||||||.|||||||||||||||||||||||||.||||
BL03352___tua 698 TATCCAAGGTGTCTGAAGGCGTCGGACTCGACAGCAGAATCGGCAGTAAA 747
BSNT_05418___ 751 TTTTTAAAAGCCGGAATCGGCTTTGGTGGCTCCTGCTTCCCTAAAGATAC 800
||||||||||||||||||||||||||.|||||.||||||||||||||.||
BL03352___tua 748 TTTTTAAAAGCCGGAATCGGCTTTGGCGGCTCTTGCTTCCCTAAAGACAC 797
BSNT_05418___ 801 AATGGCTTTATTGCATATCGCGAAGTCAGCCGGCTACCCTTTTAAAATGA 850
.||||||||||||||.|||||||||||||.|||.||.|||||||||.|||
BL03352___tua 798 GATGGCTTTATTGCAAATCGCGAAGTCAGTCGGTTATCCTTTTAAATTGA 847
BSNT_05418___ 851 TTGAAGCCGTCATCGAGACGAACCAAAAGCAGCGTGCCCACATTGTGCAG 900
|||||||.||||||||||||||.|||||||||||.||||||||||||||.
BL03352___tua 848 TTGAAGCTGTCATCGAGACGAATCAAAAGCAGCGCGCCCACATTGTGCAA 897
BSNT_05418___ 901 AAGCTCCTTGATGTGTTCGGCGATTTAAACGGCAAGACCATTTCAATTCT 950
||||||||||||||||||||||||||||||||||.|||||||||..||||
BL03352___tua 898 AAGCTCCTTGATGTGTTCGGCGATTTAAACGGCATGACCATTTCGGTTCT 947
BSNT_05418___ 951 TGGTTTGGCATTCAAGCCTAATACAAACGATATGCGCTCAGCTCCATCTC 1000
|||..|||||||||||||.|||||.||||||||||||||.||.||.||||
BL03352___tua 948 TGGGCTGGCATTCAAGCCGAATACTAACGATATGCGCTCGGCGCCGTCTC 997
BSNT_05418___ 1001 TGGATGTCATTCCGACGCTGAGAAGTCTTGGTGCTAAAGTCAAAGCGTTT 1050
|||||||||||||||.|||||||||.||.|||||||||||||||||||||
BL03352___tua 998 TGGATGTCATTCCGATGCTGAGAAGCCTCGGTGCTAAAGTCAAAGCGTTT 1047
BSNT_05418___ 1051 GATCCGATTGCGGTTCCTGAAGCAGAAAAGATTCTGGGCGATCAAGCTGT 1100
|||||||||||.||.|||||||||||||||.||||.|||||||||||.||
BL03352___tua 1048 GATCCGATTGCTGTACCTGAAGCAGAAAAGCTTCTCGGCGATCAAGCCGT 1097
BSNT_05418___ 1101 TTACAGCGAAGATCTGTATGAGACGATTCAAGATACGGATGCCTGCGTCA 1150
||||||||||||||||||||||||||||||.|||||||||||.|||||||
BL03352___tua 1098 TTACAGCGAAGATCTGTATGAGACGATTCAGGATACGGATGCGTGCGTCA 1147
BSNT_05418___ 1151 TATTGACAGAGTGGCATGAGATACAGAACATGGATATTACCAAACTCAAG 1200
|||||||.|||||||..||..|||||||||||||||||.|||||||.|||
BL03352___tua 1148 TATTGACGGAGTGGCCGGAAGTACAGAACATGGATATTGCCAAACTTAAG 1197
BSNT_05418___ 1201 GCCGCTTTGAAAAATCCCGTCTTAATCGATGGACGTAATATATTTGAAGT 1250
.|.|||||||||||.||||||||||||||||||.|.||||||||||||.|
BL03352___tua 1198 TCTGCTTTGAAAAACCCCGTCTTAATCGATGGAAGAAATATATTTGAAAT 1247
BSNT_05418___ 1251 TGAAAAAATGAGAAACGAAGGTATGATCTATCATTCAATCGGACGGCCGG 1300
||||.||||||||||||||||.||||||||.|||||||||||||||||||
BL03352___tua 1248 TGAACAAATGAGAAACGAAGGCATGATCTACCATTCAATCGGACGGCCGG 1297
BSNT_05418___ 1301 AAGTACAGGTAGAAGGAATTCTGACCAACGTATAA 1335
|||||||||.|||||||||.|||||||||||||||
BL03352___tua 1298 AAGTACAGGGAGAAGGAATCCTGACCAACGTATAA 1332
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