Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05427 and BL03348
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:33
# Commandline: needle
# -asequence dna-align/BSNT_05427___lytC.1.5803.seq
# -bsequence dna-align/BL03348___lytC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05427___lytC-BL03348___lytC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05427___lytC-BL03348___lytC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05427___lytC
# 2: BL03348___lytC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1488
# Identity: 1381/1488 (92.8%)
# Similarity: 1381/1488 (92.8%)
# Gaps: 27/1488 ( 1.8%)
# Score: 6585.0
#
#
#=======================================
BSNT_05427___ 1 ---------------------------ATGTTGTTGTTAGGGTTCTTTTT 23
|||||||||||||||||||||||
BL03348___lyt 1 TTGAGGGTTTTTCTTAAAGCTGTACCTATGTTGTTGTTAGGGTTCTTTTT 50
BSNT_05427___ 24 GTTTATGCCTAATGTATTTGCGGCCAACTCTGTCACAAGATTAGACGGTG 73
||||.|||||||||||||||||||||||||||||||||||||||||||||
BL03348___lyt 51 GTTTGTGCCTAATGTATTTGCGGCCAACTCTGTCACAAGATTAGACGGTG 100
BSNT_05427___ 74 TAAATCGTTATGAGGTTGCGGTGAACGTTTCCAAGCAGGGATGGTCAAGT 123
.|||.||.||||||||||||||||||||||||||||||||.|||.|||||
BL03348___lyt 101 CAAACCGATATGAGGTTGCGGTGAACGTTTCCAAGCAGGGGTGGACAAGT 150
BSNT_05427___ 124 GCAAGCACTGTCATTGTTGCAAATGGAAAGGCATATGCAGACGTCCTTTC 173
|||||||||||.||||||||||||||||||||||||||||||||||||||
BL03348___lyt 151 GCAAGCACTGTGATTGTTGCAAATGGAAAGGCATATGCAGACGTCCTTTC 200
BSNT_05427___ 174 AGCAACTCCATTTGCCTATCGAAACAACGCGCCTGTTCTATTAACTGAAG 223
|||.|||||||||||||||||||||||||||||||||||||||||.||||
BL03348___lyt 201 AGCGACTCCATTTGCCTATCGAAACAACGCGCCTGTTCTATTAACGGAAG 250
BSNT_05427___ 224 CGTCTAAATTACCAACGGCGACAAAAAACCGAATTAGTCAGTTAAAACCT 273
||||||||.|.||||||||.||.|||||||||||.|||||.|||||||||
BL03348___lyt 251 CGTCTAAACTGCCAACGGCCACTAAAAACCGAATCAGTCAATTAAAACCT 300
BSNT_05427___ 274 AGCAAAGTGATCGTAATCGGCGGAACCGTCAGCGTTCAAAACGGCGTCGT 323
||||||||||||||||||||||||||||||||||||||||||||.|||||
BL03348___lyt 301 AGCAAAGTGATCGTAATCGGCGGAACCGTCAGCGTTCAAAACGGTGTCGT 350
BSNT_05427___ 324 AAACGAGATTAAAAAGCTTGGTGTGTCATCTGTCGAACGCATCGGCGGAG 373
||.||||||.||||||||||||||||||||||||||||||||||||||||
BL03348___lyt 351 AAGCGAGATCAAAAAGCTTGGTGTGTCATCTGTCGAACGCATCGGCGGAG 400
BSNT_05427___ 374 CGAATCGCTACGAGGTTGCGGCGAATATTGCAAATAAGTTGCCGAAAAAT 423
|||||||||||||||||||||||||||||||.||||||.||||||..|||
BL03348___lyt 401 CGAATCGCTACGAGGTTGCGGCGAATATTGCGAATAAGCTGCCGAGCAAT 450
BSNT_05427___ 424 TCAAAAGCTGTCATCGCAAACGGAACGGCGTATGCTGACAGCCTAGCGAT 473
||.||||||||||||||||||||.|||||.||||||||||||||.|||||
BL03348___lyt 451 TCGAAAGCTGTCATCGCAAACGGGACGGCCTATGCTGACAGCCTTGCGAT 500
BSNT_05427___ 474 CGGCGCATATGCCGCAAGAAACGGCATTCCGATTCTTTTAACATCGTCAA 523
|||||||||||||||.|||||||||||.||||||||||||||||||||.|
BL03348___lyt 501 CGGCGCATATGCCGCGAGAAACGGCATCCCGATTCTTTTAACATCGTCGA 550
BSNT_05427___ 524 ATTCCATACCGACAGCGACAAAAAATGCAATGAAGAGCAAAGGAACAACA 573
||||||||||||||||||||||||||||.|||||||||||||||||||||
BL03348___lyt 551 ATTCCATACCGACAGCGACAAAAAATGCGATGAAGAGCAAAGGAACAACA 600
BSNT_05427___ 574 TCGACCATCGTCGTAGGCGGTGAAGTCAGCATCTCCAGCAGCGTATACAA 623
||||||||.|||||||||||||||||||||||||||||||||||.|||||
BL03348___lyt 601 TCGACCATTGTCGTAGGCGGTGAAGTCAGCATCTCCAGCAGCGTTTACAA 650
BSNT_05427___ 624 ACAGCTTGCTTCTCCGACGCGGATCGGCGGCAGCAACCGCTATGAAGTCG 673
||||||||||||||||||||||||||||||||||||||||||||||||||
BL03348___lyt 651 ACAGCTTGCTTCTCCGACGCGGATCGGCGGCAGCAACCGCTATGAAGTCG 700
BSNT_05427___ 674 CGGCAAATGTCGTCAAGAAATATTATTCTTCTGCGAAGAATGCAATTATC 723
||||.|||||||||||||||||||||||||||||.|||||||||||.|||
BL03348___lyt 701 CGGCCAATGTCGTCAAGAAATATTATTCTTCTGCCAAGAATGCAATCATC 750
BSNT_05427___ 724 AGCAACGGCTATGCGTATGCCGATGGATTAACAGGATCTGTTCTGGCGGC 773
|||||||||||||||||||||||.||||||||||||||||||||||||||
BL03348___lyt 751 AGCAACGGCTATGCGTATGCCGACGGATTAACAGGATCTGTTCTGGCGGC 800
BSNT_05427___ 774 TAAGCAAAACCGTCCGATGATGTTCACGAATGCATCGTCTTTGCCGACAC 823
||||||||||||||||||||||||||||||||||||.|||||||||||||
BL03348___lyt 801 TAAGCAAAACCGTCCGATGATGTTCACGAATGCATCATCTTTGCCGACAC 850
BSNT_05427___ 824 CGACAAGAGAAGTGATCGGTTCCAAAAACATGACGACGTTTACCGTGCTT 873
|||||||||||||||||||||||||||||||||||||||||||.||||||
BL03348___lyt 851 CGACAAGAGAAGTGATCGGTTCCAAAAACATGACGACGTTTACTGTGCTT 900
BSNT_05427___ 874 GGCGGAACGGTTTCTCTTCAATCCAATGTCGTGTCACAGCTGAAAAATCC 923
||||||||||||||||||||||||||||||||||||||||||||.|||||
BL03348___lyt 901 GGCGGAACGGTTTCTCTTCAATCCAATGTCGTGTCACAGCTGAAGAATCC 950
BSNT_05427___ 924 GATCGTCGGCAAAAAAATCTTCATTGATGCAGGGCACGGAGGTACAGACA 973
||||||||||||||||||||||||||||||||||||||||||||||||||
BL03348___lyt 951 GATCGTCGGCAAAAAAATCTTCATTGATGCAGGGCACGGAGGTACAGACA 1000
BSNT_05427___ 974 GCGGTGCTATCGGCAACAGTCTATATGAAAAAAGTGTGAACCTTGATGTT 1023
|||||||..||||||||.||.|||||||.|||||.|||||||||||||||
BL03348___lyt 1001 GCGGTGCCGTCGGCAACGGTTTATATGAGAAAAGCGTGAACCTTGATGTT 1050
BSNT_05427___ 1024 GCAAAATTAATTAATACGAAATTATCAAACGGCGGTGCTCTGCCAATAAT 1073
|||||||||||||||||||||.|||||||||||||||||||||||||.||
BL03348___lyt 1051 GCAAAATTAATTAATACGAAACTATCAAACGGCGGTGCTCTGCCAATTAT 1100
BSNT_05427___ 1074 GGCGAGGACGAACGACACTTACCTGACGCTTGCACAGCGCGTGTCAAAAG 1123
||||||.|||||||||||||||||||||||.|||||||||||||||||||
BL03348___lyt 1101 GGCGAGAACGAACGACACTTACCTGACGCTCGCACAGCGCGTGTCAAAAG 1150
BSNT_05427___ 1124 CACAGTCAAATAAAGCAGATTTGTTTGTCAGCATCCATGCAAACTCGGCA 1173
|.|||||||||.|.||.|||||||||||||||||||||||||||||||||
BL03348___lyt 1151 CGCAGTCAAATCATGCGGATTTGTTTGTCAGCATCCATGCAAACTCGGCA 1200
BSNT_05427___ 1174 ACGCCTGCTGCTTCCGGAACAGAAACTTACTATTATACGACGTATGAATC 1223
|||||.||||||||||||||||||||.|||||||||||.||.||||||||
BL03348___lyt 1201 ACGCCAGCTGCTTCCGGAACAGAAACCTACTATTATACAACATATGAATC 1250
BSNT_05427___ 1224 AGCCAATAGTAAAAGGTTGGCAACCGAGATTCAAAATCGTCTCTATGTAG 1273
.|||||.||.|||.||.|||||||||||||||||||.|||||||||||.|
BL03348___lyt 1251 TGCCAACAGCAAACGGCTGGCAACCGAGATTCAAAACCGTCTCTATGTTG 1300
BSNT_05427___ 1274 CGCTGAATACAACAAACCGTGGTGTGAAAATCGGCAACTTCCATGTCATC 1323
|..|||||||||.||||||.|||||.||.|||||||||||||||||||||
BL03348___lyt 1301 CATTGAATACAAAAAACCGCGGTGTAAAGATCGGCAACTTCCATGTCATC 1350
BSNT_05427___ 1324 AGGGAATCCAAAATGCCAAGCTGCCTTGTTGAACTTGCGTTTATCACCAA 1373
||||||||.|||||||||||||||||||||||||||||||||||||.|||
BL03348___lyt 1351 AGGGAATCAAAAATGCCAAGCTGCCTTGTTGAACTTGCGTTTATCAGCAA 1400
BSNT_05427___ 1374 TATCAACGATGCGGCTAAGCTCAAAAGCTCAATTTACAAAGAAAAAGGCG 1423
|.|.|.|||||||.|.||.|||||||||||.|.|||||||||||||||||
BL03348___lyt 1401 TGTAAGCGATGCGACAAAACTCAAAAGCTCGACTTACAAAGAAAAAGGCG 1450
BSNT_05427___ 1424 CTAAAGCGATTTACGACGGAATCGTTGCTTACTATTAA 1461
||||||||||||||||||||||||||||||||||||||
BL03348___lyt 1451 CTAAAGCGATTTACGACGGAATCGTTGCTTACTATTAA 1488
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