Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01934 and BL03344
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence dna-align/BSNT_01934___yjbI.1.5803.seq
# -bsequence dna-align/BL03344___yjbI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01934___yjbI-BL03344___yjbI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01934___yjbI-BL03344___yjbI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01934___yjbI
# 2: BL03344___yjbI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 405
# Identity: 312/405 (77.0%)
# Similarity: 312/405 (77.0%)
# Gaps: 12/405 ( 3.0%)
# Score: 1192.0
#
#
#=======================================
BSNT_01934___ 1 ATGGGACAATCGTTTAACGCACCTTATGAAGCGATTGGAGAGGAACTTCT 50
|||||||||||||||||||||||||||||||||||||||||.||.|||||
BL03344___yjb 1 ATGGGACAATCGTTTAACGCACCTTATGAAGCGATTGGAGAAGAGCTTCT 50
BSNT_01934___ 51 ATCGCAACTTGTTGATACTTTTTATGAGCGTGT--CGCGTCTCATCCTTT 98
|||||||||||||||||||||||||||.||||| .||| .|||||..|
BL03344___yjb 51 ATCGCAACTTGTTGATACTTTTTATGAACGTGTAAAGCG--GCATCCGCT 98
BSNT_01934___ 99 GCTGAAGCCGATTTTTCCTAGCGATTTGACAGAAACCGCCAGGAAACAGA 148
|||..|.|||||||||||...|||.||.||.|||||.||.||.||.||||
BL03344___yjb 99 GCTCTACCCGATTTTTCCGGACGACTTAACGGAAACGGCAAGAAAGCAGA 148
BSNT_01934___ 149 AGCAATTCTTAACTCAGTATTTAGGCGGGCCTCCGCTTTATACCGAGGAG 198
|||||||.|||||.||.|||||||||||.||.|||||||||||.||.||.
BL03344___yjb 149 AGCAATTTTTAACGCAATATTTAGGCGGTCCGCCGCTTTATACAGAAGAA 198
BSNT_01934___ 199 CACGGCCATCCTATGCTCAGAGCAAGGCATCTTCCCTTTCCAATTACA-- 246
|||||.||.||.||.||.||.||..||||.||.||.|||||.||.|||
BL03344___yjb 199 CACGGACACCCGATACTGAGGGCGCGGCACCTGCCGTTTCCGATCACACC 248
BSNT_01934___ 247 --AACGAGAGAGCTGATGCGTGGCTCAGCTGTATGAAGGACGCAATGGAC 294
||| |.||.||.||.|||||....||||||||.||.||||||||.
BL03344___yjb 249 GGAAC----GGGCGGACGCATGGCTTTCGTGTATGAAAGAGGCAATGGAT 294
BSNT_01934___ 295 CATGTAGGGCTGGAGGGCGAAATTCGTGAGTTTTTGTTTGGCCGGCTGGA 344
|||||.||..|..||||||||||..|.||.|||.|.||||...|||||..
BL03344___yjb 295 CATGTCGGTTTAAAGGGCGAAATCAGGGAATTTCTTTTTGAAAGGCTGAC 344
BSNT_01934___ 345 GTTGACAGCAAGGCATATGGTGAATCAAACGGAAGCGGAGGATCGATCAT 394
.||||||||.||.||||||||.|||||..||.||..|||||||.|.|||.
BL03344___yjb 345 ATTGACAGCCAGACATATGGTAAATCAGCCGAAAATGGAGGATGGTTCAC 394
BSNT_01934___ 395 CTTGA 399
.||||
BL03344___yjb 395 ATTGA 399
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