Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01941 and BL03338
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence dna-align/BSNT_01941___yjbM.1.5803.seq
# -bsequence dna-align/BL03338___yjbM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01941___yjbM-BL03338___yjbM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01941___yjbM-BL03338___yjbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01941___yjbM
# 2: BL03338___yjbM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 650
# Identity: 509/650 (78.3%)
# Similarity: 509/650 (78.3%)
# Gaps: 25/650 ( 3.8%)
# Score: 2027.0
#
#
#=======================================
BSNT_01941___ 1 ATGATGGATGACAAACAATGGGAGCGTTTTTTAGTGCCGTACCGCCAGGC 50
||||||||.|||||||||||||..|||||||.|||||||||.|||||
BL03338___yjb 1 ---ATGGATGAAAAACAATGGGAGCAGTTTTTAGCGCCGTACCGGCAGGC 47
BSNT_01941___ 51 TGTCGAAGAGTTGAAAGTGAAGCTCAAGGGGATCCGCACACTATATGAAT 100
|||.||||||.|||||||||||||.||.||||||||.||.||.||.||||
BL03338___yjb 48 TGTTGAAGAGCTGAAAGTGAAGCTGAAAGGGATCCGGACCCTTTACGAAT 97
BSNT_01941___ 101 ACGAGGACGACCATTCACCGATCGAATTTGTGACCGGACGCGTCAAGCCT 150
|||||||.||.|||||.|||||.|||||.|||||.||.||.||.||||||
BL03338___yjb 98 ACGAGGAAGAGCATTCGCCGATTGAATTCGTGACGGGGCGGGTGAAGCCT 147
BSNT_01941___ 151 GTGGCGAGCATTCTTGAAAAAGCGAGACGGAAAAGCATACCGCTGCATGA 200
|||.||||.||||||||.||.||.|..||.||||.|||.||.|||||..|
BL03338___yjb 148 GTGCCGAGTATTCTTGAGAAGGCCAAGCGAAAAAACATTCCTCTGCACAA 197
BSNT_01941___ 201 AATTGAAACCATGCAGGACATTGCTGGCCTTAGAATCATGTGCCAATTTG 250
.|||||||.||||||.||.||.||.||.||.||||||||||||||||||.
BL03338___yjb 198 CATTGAAAGCATGCAAGATATAGCCGGGCTCAGAATCATGTGCCAATTTT 247
BSNT_01941___ 251 TCGATGACATCCAAATCGTAAAAGAGATGCTTTTTGCCAGAAAAGATTTC 300
|.||.||.||.|..||.||....||.||||||||.||.|||||.||.|||
BL03338___yjb 248 TTGAGGATATTCGCATTGTCGTCGATATGCTTTTGGCGAGAAAGGACTTC 297
BSNT_01941___ 301 ACCGTTGTGGATCAGAGGGATTATATTGCGGAACATAAAGAGAGCGGATA 350
||.||.||||||.||.|.||.|||||.||||||||||||||||||||.||
BL03338___yjb 298 ACGGTGGTGGATAAGCGCGACTATATCGCGGAACATAAAGAGAGCGGCTA 347
BSNT_01941___ 351 CCGGTCATACCATCTTGTTGTGCTGTACCCTTTGCAGACGGTATC--CGG 398
|||.||.||||||||.||.||||||||.||||||||||| .||| |||
BL03338___yjb 348 CCGCTCCTACCATCTCGTCGTGCTGTATCCTTTGCAGAC--AATCAACGG 395
BSNT_01941___ 399 AGAAAAGCATGTTCTCGTAGAAATACAGATCCGTACACTGGCGATGAATT 448
.|||||.||..||.|.||.|||||.||.|||||.||.|||||||||||||
BL03338___yjb 396 GGAAAAACAGATTTTGGTTGAAATTCAAATCCGGACGCTGGCGATGAATT 445
BSNT_01941___ 449 TTTGGGCGACCATTGAACATTCATTGAATTATAAATACAGCGGAAACATT 498
||||||||||.|||||.|||||.||.|||||||||||||||||.||||||
BL03338___yjb 446 TTTGGGCGACGATTGAGCATTCTTTAAATTATAAATACAGCGGCAACATT 495
BSNT_01941___ 499 CCTGAAAAAGTAAAACTAAGGCTTCAGCGCGCTTCTGAAGCGGCTTCCCG 548
||.||||||||||||.|||||||||||.|.|||||.|||||.||.||..|
BL03338___yjb 496 CCGGAAAAAGTAAAATTAAGGCTTCAGAGAGCTTCGGAAGCAGCATCAAG 545
BSNT_01941___ 549 GCTTGATGAAGAGATGTCGGAGATCAGGGGTGAAGTACAGGAAGCTCAAG 598
|||.|||...||.|||||.|||||||||||.||..|.|||||.|||||.|
BL03338___yjb 546 GCTCGATATGGAAATGTCTGAGATCAGGGGCGAGATTCAGGAGGCTCAGG 595
BSNT_01941___ 599 CTGCCTTTTCAAGAAAGAAAAA-----AGGAAG-CG---AGCAACAATAG 639
|.||.||||||.|.|||||||| ||||.| || ||
BL03338___yjb 596 CGGCGTTTTCACGCAAGAAAAAGGATGAGGATGACGGTTAG--------- 636
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