Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01930 and BL03337

See Amino acid alignment / Visit BSNT_01930 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:27
# Commandline: needle
#    -asequence dna-align/BSNT_01930___yjbG.1.5803.seq
#    -bsequence dna-align/BL03337___pepF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01930___yjbG-BL03337___pepF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01930___yjbG-BL03337___pepF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01930___yjbG
# 2: BL03337___pepF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2072
# Identity:    1552/2072 (74.9%)
# Similarity:  1552/2072 (74.9%)
# Gaps:         127/2072 ( 6.1%)
# Score: 5773.0
# 
#
#=======================================

BSNT_01930___      1 GTGAAAGG-------CA---CAAAAGGAAAGGTTTTTCGTGTTTTTACTG     40
                     |||...||       ||   ||||| ||.|.||.|||..|.||||.||.|
BL03337___pep      1 GTGTCCGGACTGTTTCAGATCAAAA-GATATGTATTTTATTTTTTAACGG     49

BSNT_01930___     41 C----TTTTTTGGCATTCGTTCTCTTCATTACTGCATATGATTTGACAAA     86
                     |    ||||.||    ||.||.|.|||      |||||||||||||||||
BL03337___pep     50 CGGGATTTTGTG----TCTTTTTTTTC------GCATATGATTTGACAAA     89

BSNT_01930___     87 AGGCAGTGAAAAACCGGAAGATATTCACAACACAAGTTTATT-GAGAAAC    135
                     ||.|.||||||||.|.||||||...|||||.||||||||||| ||.||  
BL03337___pep     90 AGACGGTGAAAAAACAGAAGATGAACACAATACAAGTTTATTGGATAA--    137

BSNT_01930___    136 AGCTGTTTTTTCAATTGGCTTGAATCAAAGAAGACGAGGGGGATCACCAT    185
                                ||||.|.||||.|..||||||..|||||||..|.||..|
BL03337___pep    138 -----------CAATGGACTTGGAGTAAAGAAAGCGAGGGGATTGACAGT    176

BSNT_01930___    186 GGCTGAGGAAAAAAAAGCAAACCAACTGCCT--GACAGAAGTGAGGTAAA    233
                     ||||||.|||||||||.|.||..||||||||  .|.||||  |||||.||
BL03337___pep    177 GGCTGAAGAAAAAAAATCGAAGAAACTGCCTTCAAGAGAA--GAGGTGAA    224

BSNT_01930___    234 GGCAGAAGACACATGGAGACTTGAGGATATTTTTCCTAGT--GATGAGGC    281
                     |..|||||||||.||||||||.||||||||.||.||  ||  |||||.||
BL03337___pep    225 GCAAGAAGACACGTGGAGACTGGAGGATATCTTCCC--GTCAGATGACGC    272

BSNT_01930___    282 CTGGAATAAAGAATTTCAAGCTGTAAAAGAATT-------AA---TTCCG    321
                     .|||||..|.|||||||||||.||.||||||.|       ||   |||||
BL03337___pep    273 TTGGAACGAGGAATTTCAAGCCGTTAAAGAACTGCTGCCCAAGCTTTCCG    322

BSNT_01930___    322 AATTTATCTAAGTATAAAGGAAAGCT-GGCAGATTCAGCTGATCATTTAT    370
                     ||||          .||.||.||||| ||| .||||.||.|||.||||||
BL03337___pep    323 AATT----------CAAGGGCAAGCTCGGC-CATTCCGCCGATGATTTAT    361

BSNT_01930___    371 ACGAGGCTCTTACGTATCAAGATAAAGTGATGGAGCGGCTGGGTAGGCTG    420
                     |.||.||.||.||.|||||.|||||.|||||||||||.||.||.|.||||
BL03337___pep    362 ATGAAGCGCTGACTTATCAGGATAAGGTGATGGAGCGTCTCGGGAAGCTG    411

BSNT_01930___    421 TACACATATGCGCATATGCGCTCTGACCAGGATACTGGGAACTCCTTTTA    470
                     ||.||.||.||.||||||||||.|||.||||||||.||.||.||.|||||
BL03337___pep    412 TATACTTACGCTCATATGCGCTATGATCAGGATACGGGAAATTCTTTTTA    461

BSNT_01930___    471 CCAGGGGCTGAATGACAAGGCGGGAAACCTGTATACACAGGCTGCAAGCG    520
                     |||.||.||.|||||.||.||||..|||||.|||||.||||||||.||||
BL03337___pep    462 CCAAGGTCTCAATGATAAAGCGGCGAACCTCTATACTCAGGCTGCGAGCG    511

BSNT_01930___    521 CGACAGCTTATTTGGTTCCGGAGATTTTATCCATAGAAGAAGACAAACTG    570
                     |.||.||.||..||||.|||||.||.|||||.||..|.|||||.||.||.
BL03337___pep    512 CCACGGCCTACATGGTGCCGGAAATATTATCGATTCAGGAAGAAAAGCTT    561

BSNT_01930___    571 CAGCAGTTCATTCTTGAAAAAGAAGAATTAAAGCTGTACTCTCATGCGAT    620
                     |||||||||.|..|.||||||||.|||||||||||.|||||.||.||..|
BL03337___pep    562 CAGCAGTTCCTGTTGGAAAAAGAGGAATTAAAGCTTTACTCACACGCTCT    611

BSNT_01930___    621 TGAGGAGATTACAAAGGAACGTCCGCATGTGCTGAGCGAGAAGGAAGAGG    670
                     .||.||.||.|..||.||.||.||.||||||||.||||   |||||||||
BL03337___pep    612 CGAAGAAATCAATAAAGAGCGCCCTCATGTGCTTAGCG---AGGAAGAGG    658

BSNT_01930___    671 CACTGCTT---GCTGAAGCCTCCGAGGTACTGGGGTCAT---CTTCAAAT    714
                     .|..|.||   ||.|||||.||.||.||.||   .||||   ||||.|||
BL03337___pep    659 AAGGGATTTTGGCCGAAGCGTCTGATGTTCT---TTCATCTCCTTCCAAT    705

BSNT_01930___    715 ACATTCAGCGTGTTAAATAACGCAGATAT--AACGTTTC-------CATC    755
                     ||||||.||.||.|.||||||||.|||||  ||  ||||       ||.|
BL03337___pep    706 ACATTCGGCATGCTGAATAACGCCGATATGGAA--TTTCCGGAGATCACC    753

BSNT_01930___    756 CATTAAAGACGAAGATGGGAATGAAAAA----CAGATCACTCACGGCAAC    801
                     .||.||| |||.||          ||||    |||.||||.||||||||.
BL03337___pep    754 GATGAAA-ACGGAG----------AAAAGGTGCAGCTCACACACGGCAAT    792

BSNT_01930___    802 TTTATTAATTTCTTGGAAAGTGAAAACCGTGAAGTCCGCAAAAATGCG--    849
                     |.|||.|..||.||||||||.||.|||||.||.||||||     .|||  
BL03337___pep    793 TATATCACCTTTTTGGAAAGCGAGAACCGCGATGTCCGC-----CGCGCG    837

BSNT_01930___    850 ---TTTGACGCAGTGTATAAAACGTACGGACAATATAAAAATACAATGGC    896
                        ||..|.||.||.|||.||||.|||||.|..|.||||||.||..|.||
BL03337___pep    838 GCATTCAAGGCCGTTTATGAAACATACGGCCGCTTTAAAAACACGCTAGC    887

BSNT_01930___    897 CACGACGCTTAGCGGCACTGTGAAAAAGGACAACTTCTACGCGAGAGTGA    946
                     ..|.|||||.|||||..||||||||||.||||||||.||.||||..||.|
BL03337___pep    888 TTCCACGCTCAGCGGAGCTGTGAAAAAAGACAACTTTTATGCGAAGGTTA    937

BSNT_01930___    947 AAAAGTACAAGTCCGCGCGTGAGGCTGCGCTT-TCTAACAACAGTATTCC    995
                     ||.|.||.||.||.|||||.||.||||| ||| ||...||||||.|||||
BL03337___pep    938 AACATTATAAATCGGCGCGGGAAGCTGC-CTTGTCGCGCAACAGCATTCC    986

BSNT_01930___    996 TGAGGAAGTATACGATAACCTTGTTAAGACGATTAATAAGCATTTGCCGC   1045
                     |||.|||||.|||||.||.|||||.|..|||||.||.||||||.|.||||
BL03337___pep    987 TGAAGAAGTCTACGACAATCTTGTCAGCACGATCAACAAGCATCTCCCGC   1036

BSNT_01930___   1046 TCCTGCACCGCTATATTGCGCTAAGAAAGAAAGTGCTTGAGCTTGATGAA   1095
                     |.||.|||||||||.|||.|.|.|||||.|||||||||||||||||||||
BL03337___pep   1037 TTCTTCACCGCTATGTTGAGATTAGAAAAAAAGTGCTTGAGCTTGATGAA   1086

BSNT_01930___   1096 GTGCATATCTATGACCTGTATACACCGCTTGTGAAAGATGCTGGGATGAA   1145
                     |||||.||.||||||||||||||.||.||.||.||.|||.||||.|||||
BL03337___pep   1087 GTGCACATGTATGACCTGTATACCCCTCTGGTCAAGGATTCTGGAATGAA   1136

BSNT_01930___   1146 GGTGACATACGAGGAAGCCAAAGATTACATGCTGAAAGGCCTTGCACCTT   1195
                     .||.||.||||||.|.||.||.||.||.||||||||.||.||.||.||||
BL03337___pep   1137 AGTCACTTACGAGCAGGCAAAGGACTATATGCTGAAGGGTCTGGCGCCTT   1186

BSNT_01930___   1196 TAGGGGAAGAATATGCCTCTATCCTAAAAGAAGGACTGGAAAACCGCTGG   1245
                     |.||||||||||||.|.||.|||||.|||||||||.||.|.|||||||||
BL03337___pep   1187 TGGGGGAAGAATATTCATCCATCCTGAAAGAAGGATTGAACAACCGCTGG   1236

BSNT_01930___   1246 GTGGACGTTTACGAAAATAAAGGCAAACGCAATGGGGCTTATTCATCAGG   1295
                     ||.||.||.||.|||||.|||||.|||||.|..||.||.|||||.|||||
BL03337___pep   1237 GTCGATGTGTATGAAAACAAAGGAAAACGAAGCGGCGCCTATTCTTCAGG   1286

BSNT_01930___   1296 AGCTTACGGCACGAATCCGTATATTTTGATGAACTGGCATAATAACGTCA   1345
                     |.|||||||.||.||||||||||||||||||||||||||..|.|||||||
BL03337___pep   1287 AACTTACGGAACCAATCCGTATATTTTGATGAACTGGCAGGACAACGTCA   1336

BSNT_01930___   1346 ATAATCTCTTTACGCTCGTGCACGAGTTTGGACATTCCGTACACAGCTAC   1395
                     |.|||||.|||||||||||.||.||.||.||.||||||||.|||||||||
BL03337___pep   1337 ACAATCTGTTTACGCTCGTCCATGAATTCGGCCATTCCGTGCACAGCTAC   1386

BSNT_01930___   1396 TATACGAGAAAGCACCAGCCTTATCCATATGGCAATTACAGCATCTTTGT   1445
                     |||||||||||..|.||||||||.||.||.||.||.||||||||.||.||
BL03337___pep   1387 TATACGAGAAAATATCAGCCTTACCCGTACGGTAACTACAGCATTTTCGT   1436

BSNT_01930___   1446 CGCGGAAGTTGCCTCTACGACAAATGAAGCGCTCCTTGGCGAATATCTGC   1495
                     .||.||||||||.||||||||.|||||||||||..|.||.|||||.||||
BL03337___pep   1437 AGCCGAAGTTGCTTCTACGACGAATGAAGCGCTGTTGGGAGAATACCTGC   1486

BSNT_01930___   1496 TGA--ACAATTTAGAGGATGAAAAACAGCGCTTATATATTCTCAACCATA   1543
                     |||  ||||  |.||.||||||||||||||..|.||||||.|.||.||||
BL03337___pep   1487 TGAATACAA--TCGAAGATGAAAAACAGCGGCTCTATATTTTGAATCATA   1534

BSNT_01930___   1544 TGCTTGAGGGCTTCAGGGGAACGGTTTTCAGACAAACGATGTTCGCTGAA   1593
                     ||||.||.|||||.|..|||||||||||||||||.||||||||.||.|||
BL03337___pep   1535 TGCTCGAAGGCTTTAAAGGAACGGTTTTCAGACAGACGATGTTTGCCGAA   1584

BSNT_01930___   1594 TTTGAACATCTGATCCAT-ACAAAGGCGCAAGAAGGCGAGCCGCTTACAC   1642
                     |||||||||..||||||| .|||| ||.||.|||||.||.|||||.||||
BL03337___pep   1585 TTTGAACATGAGATCCATGTCAAA-GCCCAGGAAGGGGAACCGCTGACAC   1633

BSNT_01930___   1643 CTGAGCTTCTGACAAAGGTCTATTACGACCTGAATAAAAAGTATTTTGGA   1692
                     |||||||..|.||.|...|.||.||.||..|||||||.||.|||||.|||
BL03337___pep   1634 CTGAGCTGTTAACGAGCATATACTATGATTTGAATAAGAAATATTTCGGA   1683

BSNT_01930___   1693 GACGGCATGGTGATTGATAAGGAAATCGGCCTTGAATGGTCGCGTATTCC   1742
                     |||...||.|.||||||||||||||||||.|||||.|||||..|.|||||
BL03337___pep   1684 GACAATATTGAGATTGATAAGGAAATCGGTCTTGAGTGGTCAAGAATTCC   1733

BSNT_01930___   1743 GCACTTCTATTACAATTACTATGTGTATCAGTATGCGACAGGGTACAGCG   1792
                     |||.||||||||||||||.|||||.|||||||||||||||||.|.|||.|
BL03337___pep   1734 GCATTTCTATTACAATTATTATGTATATCAGTATGCGACAGGCTTCAGTG   1783

BSNT_01930___   1793 CTGCCCAAGCATTAAG-CAGCCAGATTTTGAAGGAAGGAAAGCCGGCGGT   1841
                     |.||.||.||..|.|| ||| ||||||||.||.|||||.||..||||.||
BL03337___pep   1784 CAGCTCAGGCGCTCAGCCAG-CAGATTTTAAAAGAAGGCAAATCGGCTGT   1832

BSNT_01930___   1842 TGACCGTTATATTGACTTCCTGAAAGCGGGAAGCTCACAATACCCGATTG   1891
                     ||||||.||||||||.|||.|||||||.||||||||..|.||.|||||||
BL03337___pep   1833 TGACCGCTATATTGAGTTCTTGAAAGCTGGAAGCTCGGATTATCCGATTG   1882

BSNT_01930___   1892 ATGTCCTGAAAAAAGCGGGTGTTGATATGACGTCTCCAGAGCCAATCGAA   1941
                     |.||.|||||||||||.||.||.||||||||||||.|||||||.||||||
BL03337___pep   1883 AAGTGCTGAAAAAAGCCGGCGTCGATATGACGTCTTCAGAGCCGATCGAA   1932

BSNT_01930___   1942 GCCGCGTGCAAAATGTTTGAAGAAAAACTTGATGAAATGGAAGAGCTGCT   1991
                     ||.||||||||||.|||||||||..|.||..|||||||||||||.||.||
BL03337___pep   1933 GCTGCGTGCAAAAAGTTTGAAGAGCAGCTGAATGAAATGGAAGAACTCCT   1982

BSNT_01930___   1992 GATGAAAGTCAAGCAGTCTTAA   2013
                     |...||||||||.||.||.|||
BL03337___pep   1983 GCAAAAAGTCAATCATTCATAA   2004


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