Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01921 and BL03328

See Amino acid alignment / Visit BSNT_01921 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:27
# Commandline: needle
#    -asequence dna-align/BSNT_01921___yjbC.1.5803.seq
#    -bsequence dna-align/BL03328___yjbC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01921___yjbC-BL03328___yjbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01921___yjbC-BL03328___yjbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01921___yjbC
# 2: BL03328___yjbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 586
# Identity:     451/586 (77.0%)
# Similarity:   451/586 (77.0%)
# Gaps:          14/586 ( 2.4%)
# Score: 1697.5
# 
#
#=======================================

BSNT_01921___      1 ATGAACTGGTATGAAAAGCTTAGCGAGTATTTTCCAATTGAAGAAATGAA     50
                     ||||||||||||||.|||||||||||||||||.||.||||||||||||||
BL03328___yjb      1 ATGAACTGGTATGAGAAGCTTAGCGAGTATTTCCCTATTGAAGAAATGAA     50

BSNT_01921___     51 ATCAAAAGCGCATATGGAAGCTCTTCTGAAA-GAGCGAAGCGATATTTAT     99
                     ||||||||.|||||||||||| .||.|.||| ||.|.||.|||||||||.
BL03328___yjb     51 ATCAAAAGAGCATATGGAAGC-ATTGTTAAAGGAACAAAACGATATTTAC     99

BSNT_01921___    100 CATAAAGATGAAGGCAAACATCATATTTTAATGTTTGCGGAATTCGATTC    149
                     ||||||||.||||||...||||||.|.||.||||..||.||||||||.||
BL03328___yjb    100 CATAAAGAAGAAGGCCGTCATCATGTGTTGATGTACGCCGAATTCGACTC    149

BSNT_01921___    150 TTTTATCTTCGTTGATTATCTGTATGTGTCTAAGGATGCAAGAGGGCAGG    199
                     ||||||.|||.|.||.|||.|.|..||.|||||.||.|||.||||.||||
BL03328___yjb    150 TTTTATTTTCATCGACTATTTATTCGTTTCTAAAGACGCACGAGGACAGG    199

BSNT_01921___    200 GGCTTGGCGGCAAATTGATCGCGAAGCTGAAAAAGAAAAATAAGCCCATA    249
                     |.|||||...|||..||||.|.||||||||||||||||||.||.||.||.
BL03328___yjb    200 GACTTGGATCCAAGCTGATTGAGAAGCTGAAAAAGAAAAACAAACCGATC    249

BSNT_01921___    250 TTGCTCGAGGTGGAACCTGTGGATGAAGATGATACTGATACAGAAAAACG    299
                     .|.|||||.||.||.||.|||||||||||||||.|.|||||.|..|||||
BL03328___yjb    250 CTACTCGAAGTTGAGCCCGTGGATGAAGATGATGCCGATACGGCGAAACG    299

BSNT_01921___    300 CCTGAGGTTTTATCAAAGAGAGCATTTCAAGCATGCTCAGTCAATTGGGT    349
                     .||.|..||||||||||..||..|.||.||.||.|||.||||.|||||.|
BL03328___yjb    300 TCTTAAATTTTATCAAAAGGAAAACTTTAAACACGCTGAGTCGATTGGTT    349

BSNT_01921___    350 ACCGGCGCCGGTCATTGGCTAC--GAATGAAGTAAACAAGATGGAGATTC    397
                     ||||.|||||||||.|.||.||  |.|  ||||.|||||.||||||||||
BL03328___yjb    350 ACCGCCGCCGGTCACTCGCAACCGGCA--AAGTGAACAAAATGGAGATTC    397

BSNT_01921___    398 TGTACTGGTCACCAAAAACAGAATCAGAAGAAGAAATTCTTGAAGCCATG    447
                     ||||.|||||.||||||.||.|..||||..|||||.|..||||.||.|||
BL03328___yjb    398 TGTATTGGTCTCCAAAATCAAACACAGAGAAAGAAGTGTTTGACGCGATG    447

BSNT_01921___    448 AAACAGACATATGAAAACATTCATACTTATAAAGACGAGAAATGGTACGG    497
                     |||.|.||.||.|||||.||.|||||.||.|||||.||.||||||||.||
BL03328___yjb    448 AAAGAAACGTACGAAAAAATCCATACATACAAAGATGAAAAATGGTATGG    497

BSNT_01921___    498 GGAATCGTACGAAAAAACGGATGAAGTCCTGAAACTC-ATTGATGAAG--    544
                     .|||||.||.|||.|...||||||.|||||.|    | ||||.|||.|  
BL03328___yjb    498 AGAATCTTATGAAGATGTGGATGACGTCCTTA----CGATTGTTGACGAT    543

BSNT_01921___    545 -AAAAACAAAAAAATATTTTCGATCAGTTAAGCTAA    579
                      |.|||||.||.||.|||||||||.|.|||||||||
BL03328___yjb    544 CATAAACAGAAGAACATTTTCGATGAATTAAGCTAA    579


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