Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01915 and BL03324

See Amino acid alignment / Visit BSNT_01915 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence dna-align/BSNT_01915___oppB.1.5803.seq
#    -bsequence dna-align/BL03324___oppB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01915___oppB-BL03324___oppB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01915___oppB-BL03324___oppB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01915___oppB
# 2: BL03324___oppB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 957
# Identity:     670/957 (70.0%)
# Similarity:   670/957 (70.0%)
# Gaps:          42/957 ( 4.4%)
# Score: 2179.5
# 
#
#=======================================

BSNT_01915___      1 TTGCTAAAATATATCGGAAGACG-CTTAGTCTATATGATTATCACACTAT     49
                     |||.|.||||||.|.||..|.|| ||| ||.||||||.|.||..|.||.|
BL03324___opp      1 TTGATTAAATATTTAGGCCGTCGTCTT-GTTTATATGTTAATTTCTCTCT     49

BSNT_01915___     50 TTGTGATTGTAACTGTGACATTCTTCTTAATGCAAGCAGCACCGGGCGGG     99
                     ..||.||.|||||.|..||.||||||.|.|||..|||...|||||||||.
BL03324___opp     50 GGGTTATCGTAACAGCTACCTTCTTCCTGATGAGAGCGATACCGGGCGGA     99

BSNT_01915___    100 CCATTTTCAGGTGAGAAAAAGCTTCCGCCTGAAATTGAAGCAAACTTAAA    149
                     ||.||||||||.||||..||.|||||.||||.|||||||||.|...|.||
BL03324___opp    100 CCCTTTTCAGGCGAGAGGAAACTTCCCCCTGCAATTGAAGCCAGTCTCAA    149

BSNT_01915___    150 TACGCACTATGGCTTGGACAAGCCGCTGTTTGTACAATATGTCAGTTATT    199
                     |.|..|||||||.||.|||.||||.||.|||..|||||||.||..|||||
BL03324___opp    150 TTCCTACTATGGTTTAGACCAGCCTCTTTTTAAACAATATCTCGATTATT    199

BSNT_01915___    200 TGAAATCAGTTGCAATGTGGGATTTCGGACCATCATTTAAATATAAAGGT    249
                     |...|||.||.||||.||||||||||||.||.||||||||||||||.||.
BL03324___opp    200 TAGTATCGGTAGCAAAGTGGGATTTCGGGCCGTCATTTAAATATAAGGGA    249

BSNT_01915___    250 CAGAGTGTTAACGACCTGATCAATTCAGGTTTCCCCGTTTCATTCACTCT    299
                     ||.|.|||.||||||.||||||..|||||.|||||..||||.||.||.||
BL03324___opp    250 CAAACTGTGAACGACTTGATCAGCTCAGGGTTCCCGATTTCTTTTACACT    299

BSNT_01915___    300 TGGAGCAGAAGCTATTCTCCTCGCTTTAGCGTTAGGTGTATTGTTTGGAG    349
                     .|||...|||||.|||..|||.||..|.||.||.||.||||||||.||.|
BL03324___opp    300 CGGATTGGAAGCGATTTGCCTTGCGCTCGCTTTCGGCGTATTGTTCGGCG    349

BSNT_01915___    350 TCATTGCAGCTCTTTACCATAATAAGTGGCAGGATTATACCGTCGCGATT    399
                     |.||.||.||.||..|.|..||.|||||||||||.||.||   .|||||.
BL03324___opp    350 TGATCGCCGCGCTGAAGCGAAACAAGTGGCAGGACTACAC---AGCGATG    396

BSNT_01915___    400 TTAA---CGATATTTGGTATTTCAGTTCCAAGCTTTATCATGGCGGCTGT    446
                     .|.|   ||.|..|.||.||.||.||.||.|.|||.||||||||.||..|
BL03324___opp    397 ATCATTGCGGTTGTCGGGATCTCTGTGCCGAACTTCATCATGGCCGCGCT    446

BSNT_01915___    447 TCTGCAATATGTGTTCTCCATGAAGCTTGGGC-TGTTTCCGGTCGCGGGG    495
                     |||.|||||.|||.|..|.||||||| ||||| |||||||.||||||...
BL03324___opp    447 TCTCCAATACGTGCTGGCAATGAAGC-TGGGCATGTTTCCTGTCGCGCAA    495

BSNT_01915___    496 TGGGAGTCCTGGG--CATACACCTTTTTG---CCTTCAATCGCACTTGCT    540
                     ||||||||.||||  |||||     |.||   |||.|||||||..||||.
BL03324___opp    496 TGGGAGTCATGGGGACATAC-----TGTGCTTCCTGCAATCGCTGTTGCC    540

BSNT_01915___    541 TCCATGCCGATGGCGTTCATTGCCAGACTTT--CCCGTTCAAGCATGATC    588
                     ||.||||||||||||||.||.|||.|  |||  |.||.||.||||||.|.
BL03324___opp    541 TCGATGCCGATGGCGTTTATCGCCCG--TTTGACGCGCTCCAGCATGCTT    588

BSNT_01915___    589 GAAGTGTTAAACAGTGATTATATCCGCACTGCGAAAGCGAAAGGGCTG-T    637
                     ||||||||.|.|||.||.|||||||||||.|||...||.|||||..|| .
BL03324___opp    589 GAAGTGTTGAGCAGCGACTATATCCGCACGGCGCGTGCAAAAGGTTTGAG    638

BSNT_01915___    638 CTCGTCCAGCAGTTACTGTGCGGCACGCCATTCGAAACGCGCTTTTGCCG    687
                     |.|.| ||||.|||||..|...|||.||.||.|||||.||..|..|||||
BL03324___opp    639 CACAT-CAGCCGTTACGTTTAAGCATGCGATACGAAATGCCATCATGCCG    687

BSNT_01915___    688 GTTGTTACATACATGGGCCCGATGGC--CGCCCAGGTCTTAACGGGAAGT    735
                     |||||||||||.||||||||.|||||  ||.|||  |.||.||.||||..
BL03324___opp    688 GTTGTTACATATATGGGCCCAATGGCGGCGTCCA--TTTTGACAGGAACG    735

BSNT_01915___    736 TTTATCATTGAAACGATTTTTGGGATCCCGGGTCTTGGTTCCCACTTCGT    785
                     |||.||.|.||||...|.||.||.||.||.||.||.||....|||||.||
BL03324___opp    736 TTTGTCGTCGAAAAAGTCTTCGGTATACCAGGACTCGGCATGCACTTTGT    785

BSNT_01915___    786 AAACAGTATTACAAACCGTGATTATACAGTCATTATGGGTGTAACGGTGT    835
                     .|..||.|||||.|||||.||.|||||.||.||.|||||.||.||.||.|
BL03324___opp    786 CACAAGCATTACGAACCGAGACTATACGGTGATCATGGGCGTTACCGTCT    835

BSNT_01915___    836 TCTTCAGTGTCATCCTGCTATTGTGTGTATTAATCGTAGACGTGCTTTAC    885
                     |||||.|.|..|||.||||..|.||.||.||.||.||.||..|..|.|||
BL03324___opp    836 TCTTCGGGGCAATCTTGCTGCTTTGCGTCTTGATTGTCGATCTTTTATAC    885

BSNT_01915___    886 GGCATTATTGATCCAAGAATCAA---GCTTTCCAAAGCAAAGAAAGGAGC    932
                     |||.|.||||||||..|.||.||   |.||..|   ||.||||||||.| 
BL03324___opp    886 GGCTTAATTGATCCGCGCATTAAATTGTTTGGC---GCTAAGAAAGGGG-    931

BSNT_01915___    933 CTAG---    936
                       ||   
BL03324___opp    932 --AGTAA    936


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01915 and BL03324

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
