Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01909 and BL03322

See Amino acid alignment / Visit BSNT_01909 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence dna-align/BSNT_01909___yjbA.1.5803.seq
#    -bsequence dna-align/BL03322___yjbA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01909___yjbA-BL03322___yjbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01909___yjbA-BL03322___yjbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01909___yjbA
# 2: BL03322___yjbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 761
# Identity:     607/761 (79.8%)
# Similarity:   607/761 (79.8%)
# Gaps:          16/761 ( 2.1%)
# Score: 2427.5
# 
#
#=======================================

BSNT_01909___      1 ATGTTATTTCTTCATGATGTGTGGGTCAATTGGTTTGAAGGGGAAGAAAA     50
                     |||||.||||||||||||||||||||.|||||||||||.||.||||||||
BL03322___yjb      1 ATGTTGTTTCTTCATGATGTGTGGGTGAATTGGTTTGAGGGAGAAGAAAA     50

BSNT_01909___     51 TGGCTACAATGTATGCCACTTTCACGAATGGCGCAAGGAAGATACGGTTG    100
                     |||||||||.||.|||||||||||.||||||||.||||||||.|..||||
BL03322___yjb     51 TGGCTACAACGTCTGCCACTTTCATGAATGGCGGAAGGAAGACAGTGTTG    100

BSNT_01909___    101 A---GCTTTTGGATCAGGTTCCGCTGCTAAGGGTGCCGTCAGTACTGTTT    147
                     |   ||||   ||.|||||.||..||.||||||||.||||.||..|||||
BL03322___yjb    101 AATTGCTT---GACCAGGTGCCTTTGTTAAGGGTGTCGTCCGTTTTGTTT    147

BSNT_01909___    148 CATTACATAGAAAATGATTTGTCAGAGCTT----CCGAAAGGTTTGCTTG    193
                     ||.|||||||||||||||||||||||||||    |||||     |..|||
BL03322___yjb    148 CACTACATAGAAAATGATTTGTCAGAGCTTCCGGCCGAA-----TTATTG    192

BSNT_01909___    194 AA-GACGTACATCAGAAATCGTACATTCGGAAAAATCATGAGCGGACAAA    242
                     || ||.||.|||||.|||.||||.|||||.||||||||||||||||||.|
BL03322___yjb    193 AACGAGGTTCATCAAAAAGCGTATATTCGTAAAAATCATGAGCGGACACA    242

BSNT_01909___    243 GCTTGAGTATTGTTTTGTCGTAACAGACGGAATCGGCATTTTGGCTGTCG    292
                     ||||||..|||||||.||||||||.|||||.||.||.|||.|.||.||||
BL03322___yjb    243 GCTTGATCATTGTTTCGTCGTAACGGACGGCATTGGTATTCTCGCGGTCG    292

BSNT_01909___    293 ACACGATCGGCTACACGATCCCTGTCAGAAAAAGCCGTTTAATCCCAAGA    342
                     |.|||..|||.|||||.||.||.||.|||||||||||..|.||.||.|||
BL03322___yjb    293 ATACGGCCGGTTACACAATACCGGTAAGAAAAAGCCGCCTCATTCCGAGA    342

BSNT_01909___    343 CAGGAGCAGCTCGTTTATGAAATGGTAAAAGATGTAGAGCCTGAAACATA    392
                     ||||||||||||||||||||||||||.||.||.||.||..|.|||||.||
BL03322___yjb    343 CAGGAGCAGCTCGTTTATGAAATGGTGAAGGACGTTGAAGCGGAAACTTA    392

BSNT_01909___    393 TGAATTTGAGCCAAAGAAGCTGGAATCCTCCAAGGAATATCACATCTTAT    442
                     .||.||||..|||.||||||||.||||.|||||.|||||.|||||.||||
BL03322___yjb    393 CGAGTTTGCACCAGAGAAGCTGCAATCTTCCAAAGAATACCACATTTTAT    442

BSNT_01909___    443 CATTAGCACCAGAACATGTCAGAGGACTGACTAGAAAAGAACGGCAAATT    492
                     |.|||.||||.||.||||||||||||.|.||.|||||||||||.||..|.
BL03322___yjb    443 CTTTATCACCGGAGCATGTCAGAGGATTAACGAGAAAAGAACGCCAGCTC    492

BSNT_01909___    493 AAGCAGCTGATGTTTATGGCGCTTGACCAATTAAAAGGGCTGAAAAATCG    542
                     ||.||||||.||||.||||||||.||.||..|.||||||||..|||||||
BL03322___yjb    493 AAACAGCTGCTGTTCATGGCGCTCGATCAGCTCAAAGGGCTCCAAAATCG    542

BSNT_01909___    543 GGCTGAAATCGGCTACTGGTACACAGAGTGGAATCCGCATATGTATGAAC    592
                     |||.||.||||..||.||||||||.||.|||||||||.||||||||||||
BL03322___yjb    543 GGCCGAGATCGCTTATTGGTACACCGAATGGAATCCGTATATGTATGAAC    592

BSNT_01909___    593 AAATCAAAAGGATGAGCTTTGAAGAGATTTGGGACATGCTGTATAACGAA    642
                     |.|||||..|.||||..||||||||.||.|||||||||||.|..||.||.
BL03322___yjb    593 AGATCAAGCGCATGACATTTGAAGAAATCTGGGACATGCTTTTCAATGAG    642

BSNT_01909___    643 ACAATTGAAGGCTGGTCGGACAAGCACCTAGCTTTTTGCGAAAACCTAAT    692
                     ||.||.||.||.|||||.|||||.|||...|..|||||.|||||..|.||
BL03322___yjb    643 ACGATCGACGGATGGTCAGACAAACACAGGGACTTTTGTGAAAATTTGAT    692

BSNT_01909___    693 AAAAGGACAGCCTTTTTTCGAAAAGCTTTGGGAAATGGAAAACGAATCAA    742
                     .|||||||||||.|||||.|||||||||||||||||.||.||.||.||.|
BL03322___yjb    693 TAAAGGACAGCCGTTTTTTGAAAAGCTTTGGGAAATTGAGAATGAGTCTA    742

BSNT_01909___    743 AGGTCAACTGA    753
                     |.|||||||.|
BL03322___yjb    743 AAGTCAACTAA    753


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