Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01907 and BL03320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence dna-align/BSNT_01907___appC.1.5803.seq
# -bsequence dna-align/BL03320___appC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01907___appC-BL03320___appC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01907___appC-BL03320___appC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01907___appC
# 2: BL03320___appC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 933
# Identity: 672/933 (72.0%)
# Similarity: 672/933 (72.0%)
# Gaps: 39/933 ( 4.2%)
# Score: 2262.5
#
#
#=======================================
BSNT_01907___ 1 ATGTCAGAGCTGCAAA-----CAACTCCCTCGCCGGAGATCAGGCTGAAA 45
|||.||.|| .|||| |.||.||.|||||||||||||...||.|.
BL03320___app 1 ATGACACAG--ACAAATCCATCGACACCTTCGCCGGAGATCACATTGCAG 48
BSNT_01907___ 46 GAAAATATTTCGAA--AAAGCCAGAAACAATGACAAAGATTTTCTGGGGA 93
|||| ||.|||.| ||||||.||.|||||||||||.||.||.|..|.|
BL03320___app 49 GAAA--ATGTCGCACCAAAGCCCGAGACAATGACAAAAATCTTTTTTGAA 96
BSNT_01907___ 94 AAATTCTCGAAAAACAAACTGGCCATTTTAGGTGCCGTTATTCTT-TTTA 142
||.||.|..||||||||.|||||..|..|.||.|..||| ||.|| ||||
BL03320___app 97 AAGTTTTATAAAAACAAGCTGGCGGTAATTGGAGGAGTT-TTATTATTTA 145
BSNT_01907___ 143 TCATTATTATGTCGGCTGTTTTCGCTCCTTTAATTGCACCTTATCCCCAA 192
|.|||||..|.||.||..||||.|||||..|.||.||.||.||.||.|..
BL03320___app 146 TTATTATCCTATCAGCGATTTTTGCTCCGGTGATCGCTCCATACCCGCCG 195
BSNT_01907___ 193 GAGCAGCAAAGCCTGCTTGATAA-ATATAAGGCGCC----GGGCCTTGAA 237
||.|||||||.|||.||..|||| .|| ||..|||| || ||||
BL03320___app 196 GAACAGCAAAACCTTCTGAATAAGCTA-AAACCGCCAAGTGG----TGAA 240
BSNT_01907___ 238 CATCTGATGGGAACGGATAAATTTGGACGTGATATTTTCAGCCGGATCCT 287
|||||.||||||||.||.||.|||||.||.||||||||||||||..|.||
BL03320___app 241 CATCTAATGGGAACAGACAAGTTTGGCCGAGATATTTTCAGCCGTTTACT 290
BSNT_01907___ 288 ATATGGAGCGCGTGTCTCTTTATTGGTTGGATTTGCGTCCGTAGTCGGCT 337
.|||||.||.||.||.||||||.|.||.||.|||||.||.|||.|.||.|
BL03320___app 291 TTATGGGGCTCGGGTTTCTTTACTTGTAGGCTTTGCCTCTGTACTTGGAT 340
BSNT_01907___ 338 CGATTTTGATCGGAACGGTTTTAGGAGCATTAGCCGGATATTTCAGAGGA 387
|||||..|||.||.|||||..|.||.|||.|.|||||.||.||..|.|||
BL03320___app 341 CGATTACGATAGGTACGGTGGTCGGCGCAATCGCCGGCTACTTTGGCGGA 390
BSNT_01907___ 388 ATAGTGGATGCTGTCATTATGCGTGTAGTTGACATTGTGTTATCCATTCC 437
|||.|.||.|||.|.||.|||.|..|.||.||.|||||.||||||||.||
BL03320___app 391 ATAATCGACGCTATTATGATGAGACTGGTGGATATTGTATTATCCATACC 440
BSNT_01907___ 438 TGATAT-TTTCTTGTTGATCACGCTGGTCACCATCTTCAAGCCGGGTGTG 486
.||.|| |||| ||||.|||||||||||||||||||||.|||||||..|.
BL03320___app 441 CGACATCTTTC-TGTTAATCACGCTGGTCACCATCTTCCAGCCGGGCATA 489
BSNT_01907___ 487 GACAAACTGATTTTAATTTTCTGTC-TCACAGGATGGACCACAACAGCAC 535
||.||||||||||||||.||| |.| |.||..|||||||.||.|||||.|
BL03320___app 490 GATAAACTGATTTTAATATTC-GCCTTGACGAGATGGACGACGACAGCGC 538
BSNT_01907___ 536 GATTAGTAAGGGGAGAATTCTTGTCGCTCCGTTCAAGGGAATATGTTC-- 583
|..|.||..||.|.||.||.|||||..|..|.||.||||| ||||
BL03320___app 539 GCCTTGTCCGGAGCGAGTTTTTGTCCTTGAGGTCGAGGGA----GTTCGT 584
BSNT_01907___ 584 --TTGCTGCTAAAACAATTGGAACAAAAACGCACAAAATTATTTTTTCTC 631
|.||.||.|||||.||.||.||||.||...|||||||.||||||||||
BL03320___app 585 CTTGGCGGCGAAAACGATCGGTACAAGAAATTACAAAATCATTTTTTCTC 634
BSNT_01907___ 632 ATATCCTGCCCAATGCGTTAGGGCCGATTATCGTGTCAGCTACGCTGAAA 681
|||||||.||.||||||.|.||||||||||||||..|.||.|||||....
BL03320___app 635 ATATCCTTCCGAATGCGATGGGGCCGATTATCGTTGCCGCGACGCTTTCC 684
BSNT_01907___ 682 GTAGGGTCTGTTATTCTAGCTGAATCGGCGCTAAGCTA-CTTGGGCTTTG 730
||.||..|.||.||.||.||.||||||||..||||||| ||| ||.||.|
BL03320___app 685 GTCGGTACCGTAATCCTTGCGGAATCGGCATTAAGCTATCTT-GGATTCG 733
BSNT_01907___ 731 GAATCCAGCCGCCAATCGCTAGCTGGGGGAACATGCTTCAAGACGCACAG 780
|..|.||||||||.||.||.||||||||.|||||||||||.||.||||||
BL03320___app 734 GGGTTCAGCCGCCGATGGCAAGCTGGGGAAACATGCTTCAGGATGCACAG 783
BSNT_01907___ 781 AATTTCACAGTAATGATTCAAGCATGGTGGTACCCGTTATTTCCCGGG-C 829
||.||.||..|.|||||.||.||.||||||||.|||.| .|||||||| |
BL03320___app 784 AACTTTACGATCATGATCCAGGCGTGGTGGTATCCGCT-GTTCCCGGGCC 832
BSNT_01907___ 830 TATTTATTTTAATGACCGTTTTATGCTTCAACTTTGTCGGTGATGGCCTG 879
|..|.||..|..|.||.||..|.|||||.|||||..|.||.||.||.||.
BL03320___app 833 TGATGATCCTGCTCACTGTGCTGTGCTTTAACTTCTTAGGCGACGGACTC 882
BSNT_01907___ 880 CGGGATGCGCTTGATCCGAAAAATATTAAATAA 912
||.|||||||||||||||||.||||||||||.|
BL03320___app 883 CGCGATGCGCTTGATCCGAAGAATATTAAATGA 915
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