Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01906 and BL03319

See Amino acid alignment / Visit BSNT_01906 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence dna-align/BSNT_01906___appB.1.5803.seq
#    -bsequence dna-align/BL03319___appB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01906___appB-BL03319___appB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01906___appB-BL03319___appB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01906___appB
# 2: BL03319___appB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 955
# Identity:     724/955 (75.8%)
# Similarity:   724/955 (75.8%)
# Gaps:           8/955 ( 0.8%)
# Score: 2686.0
# 
#
#=======================================

BSNT_01906___      1 ATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATT     50
                     |||..|.|||||||.||..||||.||..|.|||||.||.||.||.|||||
BL03319___app      1 ATGATTACATATATCATTCGAAGGACGCTCATGTCGATTCCAATATTATT     50

BSNT_01906___     51 GGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATC    100
                     .||.|||||.|||||.|||||||..||.||||||||.|||||.|||||||
BL03319___app     51 TGGTATTACAATTTTGTCATTTGCGATTATGAAAGCAGCGCCGGGAGATC    100

BSNT_01906___    101 CGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAG    150
                     |.|||.||||.||||||||.||||..||||||..||..|||.|.||..|.
BL03319___app    101 CAATGGCATTGATGATGGATCCGACCATCAGCGCGGGAGACCGTGAAAAA    150

BSNT_01906___    151 TTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAA    200
                     ||.||||||||||||||..||.||||.|||.|..||||||||||||||||
BL03319___app    151 TTCATTGAAAAATACGGGTTGGATGAACCTGAACACGTTCAATATTTAAA    200

BSNT_01906___    201 GTGGCTAGGCAACATGGTGCAGGGTGATTTCGGAACGTCTATTGTCAGAA    250
                     ||||||.||.||.|||||.||.|||||.|||||.||.||.||.||.||||
BL03319___app    201 GTGGCTCGGAAATATGGTTCAAGGTGACTTCGGTACTTCAATCGTTAGAA    250

BSNT_01906___    251 AAGGAACGCCTGTTTCAGAATTGATTATGGCAAGACTACCCAATACGCTC    300
                     ||||||||||.||..|.||.|||||||||||.||.||.||.||||||.|.
BL03319___app    251 AAGGAACGCCAGTGACTGATTTGATTATGGCGAGGCTGCCGAATACGTTA    300

BSNT_01906___    301 CTGCTGATGCTGGTTTCAACGATTTTGGCTCTTATGATTTCTATTCCGTT    350
                     .||.|.|||||.||||||||.|||||||||||..|.||.||.||.|||.|
BL03319___app    301 TTGTTAATGCTCGTTTCAACCATTTTGGCTCTCCTCATATCGATCCCGCT    350

BSNT_01906___    351 CGGTGTCCTGTCGGCAAAGCGGCCGTATTCAAAAATCGACTATGGCATTA    400
                     .||.||.||.||.||.|.||||||.|||||.|||.|.||.||||||||.|
BL03319___app    351 TGGAGTGCTTTCAGCTAGGCGGCCATATTCTAAATTGGATTATGGCATCA    400

BSNT_01906___    401 CATTTACCTCGTTTATAGGTCTGGCTATTCCAAACTTTTGGTTTGGATTA    450
                     ||||.||.||.|||||.|||||.|||.|.|||||.||||||.|||||.|.
BL03319___app    401 CATTCACATCATTTATCGGTCTTGCTGTCCCAAATTTTTGGCTTGGACTG    450

BSNT_01906___    451 ATTTTGATTATGGTGTTATCGGTAAATCTCGGCTGGTTTCCAACCGGGGG    500
                     |||.|.||.|||.|..|..|.||.|||.|.||.|||||||||||||||||
BL03319___app    451 ATTCTAATCATGTTTCTTGCTGTTAATTTAGGATGGTTTCCAACCGGGGG    500

BSNT_01906___    501 TGTCGAGACGCTGAATACCGAATTCAATATATTTGACCGGATTCATCATT    550
                     .||...|||.||||||.||||.||.|.|.|||..||.||.|||||||||.
BL03319___app    501 CGTTATGACTCTGAATGCCGATTTTAGTTTATGGGATCGCATTCATCATC    550

BSNT_01906___    551 TAATTCTGCCTGCATTCGTTCTAGCTACAGCTGACATGGCCGGACTGACG    600
                     |||||.|||||||||||||.||.||.||.||.||.|||||.|||||.||.
BL03319___app    551 TAATTTTGCCTGCATTCGTCCTGGCGACCGCAGATATGGCGGGACTCACC    600

BSNT_01906___    601 AGATACACGAGATCCAATATGCTTGATGTATTAAATCAAGATTATATTCG    650
                     .|.|||||||||||.|..|||||||||||..|.|..|||||.||.||.||
BL03319___app    601 CGCTACACGAGATCGAGCATGCTTGATGTGCTCAGGCAAGACTACATGCG    650

BSNT_01906___    651 CACAGCGAGAGCAAAAGGATTTAAAGAGAACAGAGTGCTATTTAAACATG    700
                     .||||||||||||||.||.||||||||.||..|.||..|.|..||.||||
BL03319___app    651 GACAGCGAGAGCAAAGGGTTTTAAAGAAAATCGTGTCGTGTACAAGCATG    700

BSNT_01906___    701 GATTGAGGAATGCATTATTACCCGTCATTACAATTTTCGGTTTGATGATT    750
                     |..|..|.||||..||..|.||.||.|||||.||.||.|||.||||||||
BL03319___app    701 GGCTTCGAAATGGTTTGCTTCCGGTTATTACGATCTTTGGTCTGATGATT    750

BSNT_01906___    751 CCTTCATTTATCGGCGGATCTGTCGTTGTCGAACAAATTTTCACTTGGCC    800
                     |||||.||.|||||||||.||||||||...|||||.|||||||.||||||
BL03319___app    751 CCTTCTTTCATCGGCGGAGCTGTCGTTACTGAACAGATTTTCAGTTGGCC    800

BSNT_01906___    801 GGGATTAGGAAAGCTGTTTGTCGATTCAGCATTCCAGCGCGATTATCCGG    850
                     .|||.|.|||||||||||||||||.||.||.||||||.|.||.|||||.|
BL03319___app    801 AGGACTTGGAAAGCTGTTTGTCGACTCTGCTTTCCAGAGGGACTATCCTG    850

BSNT_01906___    851 TTATCATGGCAATGACTGTGATCTCGG---CGGTTCTTGTCGTTGTCGGA    897
                     |.||.|||||||||||.||.||.||.|   |..||.|||||.|||  |||
BL03319___app    851 TCATTATGGCAATGACGGTTATTTCAGCCACACTTGTTGTCATTG--GGA    898

BSNT_01906___    898 AACCTCA-TTGCAGACATCCTTTACGCGATTGTTGATCCGCGGATCGAAT    946
                     |  .|.| ||||.||.||.|||||.||.||.||.|||||||||||.||.|
BL03319___app    899 A--TTTAGTTGCGGATATTCTTTATGCAATGGTCGATCCGCGGATTGAGT    946

BSNT_01906___    947 ATTAA    951
                     |||||
BL03319___app    947 ATTAA    951


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01906 and BL03319

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
