Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01899 and BL03314

See Amino acid alignment / Visit BSNT_01899 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:25
# Commandline: needle
#    -asequence dna-align/BSNT_01899___fabF.1.5803.seq
#    -bsequence dna-align/BL03314___fabF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01899___fabF-BL03314___fabF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01899___fabF-BL03314___fabF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01899___fabF
# 2: BL03314___fabF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1247
# Identity:     980/1247 (78.6%)
# Similarity:   980/1247 (78.6%)
# Gaps:          13/1247 ( 1.0%)
# Score: 3793.5
# 
#
#=======================================

BSNT_01899___      1 ATGACTAAAAAAAGAGTAGTTGTTACAGGACTTGGAGCATTATCTCCACT     50
                     ||||.||..|||||||||||..||||.|||.|.|||||.|||||.||.||
BL03314___fab      1 ATGAATAGTAAAAGAGTAGTCATTACCGGATTAGGAGCTTTATCACCTCT     50

BSNT_01899___     51 TGGCAACGACGTCGATACAAGTTGGAATAACGCAATCAACGGTGTGTCCG    100
                     |||.||.||||||.|.|||||.|||||.|||||.||||||||.||.||||
BL03314___fab     51 TGGTAATGACGTCAAAACAAGCTGGAACAACGCGATCAACGGGGTTTCCG    100

BSNT_01899___    101 GAATCGGTCCGATCACTCGTGTTGACGCTGAAGAATATCCGGCAAAAGTT    150
                     ||.||||.|||||.||..|.||..||||.||.||.|||||.||.|||||.
BL03314___fab    101 GAGTCGGCCCGATAACAAGGGTGAACGCGGACGAGTATCCTGCTAAAGTA    150

BSNT_01899___    151 GCCGCTGAATTAAAAGATTTTAATGTTGAAGATTATATGGATAAAAAAGA    200
                     |||||.|||.|.|||||||||||..|.|||||||||||||||||||||||
BL03314___fab    151 GCCGCAGAACTGAAAGATTTTAAGATAGAAGATTATATGGATAAAAAAGA    200

BSNT_01899___    201 AGCCAGAAAAATGGACCGCTTTACACAATATGCGGTTGTGGCTGCGAAAA    250
                     |||.|||||||||||||||||.|||||||||||.||||||.|.|||||||
BL03314___fab    201 AGCGAGAAAAATGGACCGCTTCACACAATATGCCGTTGTGTCGGCGAAAA    250

BSNT_01899___    251 TGGCGGTTGAAGATGCAGATCTTAACATTACCGATGAG-ATCGC--GCCG    297
                     ||||.||.|||||.||.|..||..||||||.||| .|| |.|||  .|||
BL03314___fab    251 TGGCCGTGGAAGACGCGGGCCTCGACATTAACGA-AAGCAACGCAGACCG    299

BSNT_01899___    298 AGAGTCGGTGTTTGGGTAGGCTCCGGTATCGGAGGACTTGAAACACTAGA    347
                      || ||||.||.|||||.||.|||||.|||||.||.||||||||.||.||
BL03314___fab    300 -GA-TCGGCGTCTGGGTCGGTTCCGGAATCGGCGGCCTTGAAACGCTTGA    347

BSNT_01899___    348 GTCTCAATTTGAAATCTTCTTAACAAAAGGCTCAAGACGGGTAAGCCCGT    397
                     ....||.||.||||..||.|||||||||||..|..|.||.||.|||||||
BL03314___fab    348 ACAGCAGTTCGAAACATTTTTAACAAAAGGACCGCGGCGCGTCAGCCCGT    397

BSNT_01899___    398 TTTTCGTGCCAATGATGATTCCTGACATGGCGACAGGCCAGATTTCTATT    447
                     |.||.||.||.||||||||||||||.||||||||.|||||||||||.||.
BL03314___fab    398 TCTTTGTACCGATGATGATTCCTGATATGGCGACCGGCCAGATTTCGATC    447

BSNT_01899___    448 GCATTAGGAGCAAAAGGGGTGAACTCTTGTACGGTTACAGCATGTGCTAC    497
                     .|..|.||.|||||||||||.||||||||||||||.||.||.||.||.||
BL03314___fab    448 TCTCTCGGTGCAAAAGGGGTCAACTCTTGTACGGTGACGGCTTGCGCGAC    497

BSNT_01899___    498 AGGAACGAACTCCATCGGTGACGCGTTTAAGGTTATTCAGCGCGGTGATG    547
                     .||.||.|||||.|||||.|||||.||.|||||.|||||||||||.||||
BL03314___fab    498 GGGTACAAACTCAATCGGCGACGCTTTCAAGGTCATTCAGCGCGGCGATG    547

BSNT_01899___    548 CAGACGTGATGGTCACAGGCGGAACAGAAGCGCCGCTGACAAGAATGTCA    597
                     |.||.||.|||.||.|.||.|||||.|||||.|||||.||||||||||||
BL03314___fab    548 CCGATGTCATGATCTCCGGAGGAACGGAAGCCCCGCTTACAAGAATGTCA    597

BSNT_01899___    598 TTCGCCGGCTTTAGTGCCAACAAAGCGCTGTCTACTAATCCAGATCCGAA    647
                     ||.|||||||||...|||||.||||||||.||.||||||||.||||||||
BL03314___fab    598 TTTGCCGGCTTTTCAGCCAATAAAGCGCTATCCACTAATCCGGATCCGAA    647

BSNT_01899___    648 AACAGCGAGCCGCCCGTTCGATAAAAACCGTGATGGCTTTGTCATGGGGG    697
                     |||.||.|||||.|||||.||.||||||||.||.|||||.||||||||.|
BL03314___fab    648 AACGGCAAGCCGTCCGTTTGACAAAAACCGCGACGGCTTCGTCATGGGAG    697

BSNT_01899___    698 AAGGTGCAGGGATTATCGTTCTTGAAGAACTTGAGCATGCCCTGGCCCGC    747
                     ||||.||.||.||..||||||||||.||.||||||||.|||.|...||||
BL03314___fab    698 AAGGAGCTGGAATCGTCGTTCTTGAGGAGCTTGAGCACGCCTTAAACCGC    747

BSNT_01899___    748 GGCGCTAAAATTTACGGAGAAATTGTCGGCTACGGCTCAACCGGAGACGC    797
                     ||.||.|.|||.||||..|||.|.|||||||||||.|||||.||||||||
BL03314___fab    748 GGAGCGACAATCTACGCGGAAGTGGTCGGCTACGGATCAACGGGAGACGC    797

BSNT_01899___    798 TTATCATATCACAGCGCCGGC-CCAAGACGGTGAAGGCGGAGCGAGAGCG    846
                     .||||||||.||.||.||.|| |||| |.||.||||||||.|..|||||.
BL03314___fab    798 CTATCATATTACGGCACCTGCGCCAA-ATGGAGAAGGCGGCGTCAGAGCC    846

BSNT_01899___    847 ATGCAAGAAGCCATTAAAGATGCAGGCATTGCACCTGAGGAAATTGATTA    896
                     |||.|||||||.||.||||||||.||..|..|.||||.|||.||||||||
BL03314___fab    847 ATGAAAGAAGCGATCAAAGATGCGGGTCTGTCCCCTGTGGACATTGATTA    896

BSNT_01899___    897 CATCAATGCTCACGGGACAAGCACGTATTACAACGACAAATACGAAACAA    946
                     .|||||||||||.||.|||||||||...|||||.||.||||..|||||.|
BL03314___fab    897 TATCAATGCTCATGGAACAAGCACGCCGTACAATGATAAATTTGAAACGA    946

BSNT_01899___    947 TGGCGATT-AAGACCGTTTTTGGCGAGCATGCGCATAAACTTGCGGTAAG    995
                     |.||.||| |||| .||.||.||.||||||||..|.||.|||||.||.||
BL03314___fab    947 TCGCCATTAAAGA-AGTGTTCGGAGAGCATGCCTACAAGCTTGCCGTCAG    995

BSNT_01899___    996 CTCTACAAAATCGATGACAGGCCACCTCTTAGGAGCAGCCGGCGGTATTG   1045
                     |||.|||||||||||||||||.|||.|..|.||.||.|||||.||.||.|
BL03314___fab    996 CTCGACAAAATCGATGACAGGGCACTTGCTCGGGGCTGCCGGAGGCATCG   1045

BSNT_01899___   1046 AAGCCATTTTCTCTATCCTGGCCATTAAAGAAGGTGTGATTCCGCCGACA   1095
                     ||||.||||||||..||||.||||||||.|||||..|.|||||.||||||
BL03314___fab   1046 AAGCGATTTTCTCCGTCCTTGCCATTAAGGAAGGCATCATTCCTCCGACA   1095

BSNT_01899___   1096 ATCAATATTCAAACACCTGACGAAGAATGTGATTTGGATTATGTGCCTGA   1145
                     ||||||||..||||.|||||.|||||.||.|||.||||.|||||.||.||
BL03314___fab   1096 ATCAATATCGAAACGCCTGATGAAGATTGCGATCTGGACTATGTACCGGA   1145

BSNT_01899___   1146 TGAAGCCCGCAGACAGGAACTTAATTATGTTCTCAGCAACTCATTAGGAT   1195
                     |.||||||||.|.|||||..|.|||..|||.|||||||||||..|.||.|
BL03314___fab   1146 TCAAGCCCGCCGCCAGGACGTGAATGTTGTGCTCAGCAACTCGCTTGGTT   1195

BSNT_01899___   1196 TCGGCGGACACAACGCAACATTAATCTTTAAGAAATATCAATCATAA   1242
                     |||||||||||||||||||..|.|||||.||.||||||.|||.|   
BL03314___fab   1196 TCGGCGGACACAACGCAACGCTGATCTTCAAAAAATATGAATAA---   1239


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