Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00141 and BL03312
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence dna-align/BSNT_00141___lysS.1.5803.seq
# -bsequence dna-align/BL03312___lysS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00141___lysS-BL03312___lysS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00141___lysS-BL03312___lysS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00141___lysS
# 2: BL03312___lysS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1515
# Identity: 1202/1515 (79.3%)
# Similarity: 1202/1515 (79.3%)
# Gaps: 30/1515 ( 2.0%)
# Score: 4749.0
#
#
#=======================================
BSNT_00141___ 1 ATGAGTCAAGAAGAGCATAACCATGAAGAATTGAATGATCAGCTGCAAGT 50
|||||.||.|||||||||||||||||||||||.||.||.|||||||||||
BL03312___lys 1 ATGAGCCATGAAGAGCATAACCATGAAGAATTAAACGACCAGCTGCAAGT 50
BSNT_00141___ 51 CAGACGCGATAAAATGAATCAGCTGAGAGATAACGGCATCGATCCATTCG 100
||||||||||||||||||||||.|||||||.|.|||.|..|||||.||||
BL03312___lys 51 CAGACGCGATAAAATGAATCAGTTGAGAGAAAGCGGAAAAGATCCTTTCG 100
BSNT_00141___ 101 GCGCA-CGTTTTGAAAGAACTCATCAGTCTCAA--GAAGTTATTTCGGCA 147
| .|| ||||||||..|.||.||||| .|||| ||..|.|||..|.|.
BL03312___lys 101 G-ACAGCGTTTTGATCGCACCCATCA--ATCAACTGATCTCATTGAGTCG 147
BSNT_00141___ 148 TATCAAGA--TCTAACCAAAGAAGAGTTAGAAGAAAAAGCGATTGAAGTT 195
|||.|.|| ||| |.||||||||.|||||.||||||||.||||||||.
BL03312___lys 148 TATAATGAATTCT--CAAAAGAAGAATTAGAGGAAAAAGCAATTGAAGTA 195
BSNT_00141___ 196 ACAATCGCAGGCCGCATGATGACAAAACGCGGCAAAGGAAAAGCCGGCTT 245
||.||.||.|||||.|||||||||||.|||||.|||||.|||||.||.||
BL03312___lys 196 ACGATTGCCGGCCGGATGATGACAAAGCGCGGAAAAGGGAAAGCGGGATT 245
BSNT_00141___ 246 TGCCCATCTTCAGGATTTAGAAGGCCAAATCCAAATCTACGTAAGAAAAG 295
.||.|||.|||||||||||.|.|||||.||.||.|||||.||.|||||||
BL03312___lys 246 CGCGCATATTCAGGATTTAAAGGGCCAGATTCAGATCTATGTCAGAAAAG 295
BSNT_00141___ 296 ACAGTGTCGGTGACGACCAATATGAAATCTTCAAGTCTTCTGACCTCGGT 345
|||||||||||||.||.||.||.|||...||.||....|||||||||||.
BL03312___lys 296 ACAGTGTCGGTGAAGAGCAGTACGAATGGTTTAAAAGCTCTGACCTCGGG 345
BSNT_00141___ 346 GATCTTATCGGCGTAACCGGAAAAGTC---TTCAAAACAAATGTAGGCGA 392
||..|..|||||||.||.|| .||| ||.|||||.|||||||||||
BL03312___lys 346 GACATCGTCGGCGTTACAGG---CGTCATGTTTAAAACGAATGTAGGCGA 392
BSNT_00141___ 393 ATTGTCTGTTAAAGCAACTTCCTTTGAATTGCTGACAAAAGCGCTTCGTC 442
|||||||||.||||||||.||.|||||.||..||||||||||.|||||||
BL03312___lys 393 ATTGTCTGTAAAAGCAACATCTTTTGATTTATTGACAAAAGCTCTTCGTC 442
BSNT_00141___ 443 CGCTTCCTGACAAATACCATGGTTTAAAAGACGTTGAGCAGCGCTACCGT 492
|||||||.||||||||.|||||.|||||.|||.|.|||||||||||||||
BL03312___lys 443 CGCTTCCGGACAAATATCATGGATTAAAGGACATCGAGCAGCGCTACCGT 492
BSNT_00141___ 493 CAGCGCTACCTGGATCTTATCGTAAACCCAGACAGCAAACATACGTTTAT 542
|||||.||..|||||.|.||||||||.||.||.||||||.||||||||||
BL03312___lys 493 CAGCGTTATTTGGATTTGATCGTAAATCCGGAAAGCAAAAATACGTTTAT 542
BSNT_00141___ 543 TACACGAAGCAAGATCATTCAAGCTATGAGAAGATACCTTGATGATCATG 592
||||||||||||.|||||||||.|.||||||||||||.|.|||||.||.|
BL03312___lys 543 TACACGAAGCAAAATCATTCAATCCATGAGAAGATACTTAGATGACCACG 592
BSNT_00141___ 593 GATACTTAGAAGTAGAAACACCTACAATGCACAGC-ATTCCTGGGGGAGC 641
|||||||||||||.|||||.|||||.|||||| || |||||.||.||.||
BL03312___lys 593 GATACTTAGAAGTTGAAACGCCTACGATGCAC-GCGATTCCGGGTGGCGC 641
BSNT_00141___ 642 TTCTGCACGTCCGTTTATCACTCACCACAACGCGTTAGACATTCCACTCT 691
.|||||.||||||||.||.||.||.||.||.|||.|.||.||.||.||.|
BL03312___lys 642 ATCTGCCCGTCCGTTCATTACACATCATAATGCGCTGGATATGCCGCTTT 691
BSNT_00141___ 692 ATATGCGTATTGCTATCGAACTGCACCTAAAACGTCTAATTGTCGGCGGT 741
|.|||.|.||.||||||||.||.||..|.|||.|.||.||.||||||||.
BL03312___lys 692 ACATGAGGATCGCTATCGAGCTCCATTTGAAAAGGCTGATCGTCGGCGGG 741
BSNT_00141___ 742 TTAGAAAAAGTATATGAAATCGGCCGTGTTTTCCGTAACGAAGGTGTCTC 791
||.||||||||.|||||||||||.|||||.|||||.||.|||||.|||||
BL03312___lys 742 TTGGAAAAAGTCTATGAAATCGGACGTGTATTCCGAAATGAAGGGGTCTC 791
BSNT_00141___ 792 TACACGCCATAACCCTGAATTTACAATGATTGAGTTATATGAAGCATATG 841
.|||||.||.||.|||||||||||.|||||.||..|.||.|||||.||||
BL03312___lys 792 CACACGGCACAATCCTGAATTTACGATGATCGAACTTTACGAAGCTTATG 841
BSNT_00141___ 842 CGGACTATAAAGATATCATGAGCTTAACTGAAAACCTTGTCGCTCATATC 891
|.||||||||.|||||.|||||.||.||.|||||.||..|.||||||||.
BL03312___lys 842 CTGACTATAAGGATATTATGAGATTGACGGAAAATCTCATTGCTCATATT 891
BSNT_00141___ 892 GCCCAAGAAGTGCTTGGCACAACTACGATTCAATACGGGGAAGAGCAAAT 941
||.|||||||||||.|||||.||.||..|||||||.||.||..|..||.|
BL03312___lys 892 GCACAAGAAGTGCTCGGCACTACGACCGTTCAATATGGAGATTATGAAGT 941
BSNT_00141___ 942 CGACCTTAAACCGGAGTGGAAAAGAATCCATATGGTTGACGCAGTCAAAG 991
||||||.||.||.||.|||||.|||.||||||||||.||.||.||.||||
BL03312___lys 942 CGACCTCAAGCCTGAATGGAAGAGACTCCATATGGTCGATGCTGTTAAAG 991
BSNT_00141___ 992 AAGCGACCGGCGTTGATTTCTGGGAAGAGGTTACTGTTGAACAGGCGCGT 1041
||||.|||||.||.||.||||||.||||.||..|.||.|||.|.||..|.
BL03312___lys 992 AAGCCACCGGTGTAGACTTCTGGAAAGAAGTATCGGTAGAAGAAGCAAGA 1041
BSNT_00141___ 1042 GAATATGCAAAAGAACATGGAGTAGAAATTAAAGACTCT------ATGAC 1085
|.||||||.||||||||.|||.|.|||||| ||| |||.|
BL03312___lys 1042 GCATATGCCAAAGAACACGGAATTGAAATT------TCTGAAGGCATGTC 1085
BSNT_00141___ 1086 AGTAGGCCATATCATCAACGAATTCTTCGAACAAAAAATTGAAGAAACGC 1135
|||.||.||||||||.||.|||||||||||.||||||.|||||||||||.
BL03312___lys 1086 AGTTGGACATATCATTAATGAATTCTTCGAGCAAAAAGTTGAAGAAACGT 1135
BSNT_00141___ 1136 TTATTCAGCCAACGTTTATTTACGGGCATCCTGTAGAAATTTCTCCTCTT 1185
|.||||||||.||.|||||.|||||.||.|||||.||.|||||||||||.
BL03312___lys 1136 TGATTCAGCCTACTTTTATATACGGACACCCTGTGGAGATTTCTCCTCTG 1185
BSNT_00141___ 1186 GCTAAGAAAAACCCTGAGGACCCGCGTTTTACAGACCGTTTTGAGCTGTT 1235
|||||||||||.|||||.|||||.||.|||||.|||||||||||||||||
BL03312___lys 1186 GCTAAGAAAAATCCTGAAGACCCTCGATTTACGGACCGTTTTGAGCTGTT 1235
BSNT_00141___ 1236 TATCGTTGGCCGTGAACATGCCAACGCGTTTACAGAGCTGAATGATCCTA 1285
||||||.||||||||.||.||.||.||.|||||.||..|.||||||||||
BL03312___lys 1236 TATCGTGGGCCGTGAGCACGCGAATGCATTTACTGAATTAAATGATCCTA 1285
BSNT_00141___ 1286 TTGATCAAAGAGAACGCTTTGAAGCGCAATTAAAAGAGCGTGAAGCCGGT 1335
|.||.||||.|||||||||||||||||||||||||||.|||||||..||.
BL03312___lys 1286 TCGACCAAAAAGAACGCTTTGAAGCGCAATTAAAAGAACGTGAAGAAGGA 1335
BSNT_00141___ 1336 AATGATGAAGCTCATCTAATGGATGAAGACTTTGTTGAAGCTCTGGAATA 1385
||.||||||||.|||.|.|||||||||||||||||.|||||.|||||.||
BL03312___lys 1336 AACGATGAAGCGCATATGATGGATGAAGACTTTGTCGAAGCGCTGGAGTA 1385
BSNT_00141___ 1386 CGGTATGCCGCCAACAGGAGGTTTAGGCATCGGTATCGACCGTCTGGTTA 1435
|||.|||||.||.||.||.||..|.||.|||||.||||||.|.|||.|||
BL03312___lys 1386 CGGAATGCCTCCTACCGGCGGCCTTGGAATCGGCATCGACAGACTGATTA 1435
BSNT_00141___ 1436 TGCTGCTGACGAATGCCCCTTCTATTCGCGATGTGCTGTTATTCCCGCAA 1485
||||..||||||||.|.|||||.||..|.||.||..|..|||||||||||
BL03312___lys 1436 TGCTTTTGACGAATTCTCCTTCAATCAGGGACGTTTTACTATTCCCGCAA 1485
BSNT_00141___ 1486 ATGAGACAACGCTAA 1500
||||||||.||.||.
BL03312___lys 1486 ATGAGACATCGTTAG 1500
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