Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03246 and BL03302
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:54
# Commandline: needle
# -asequence dna-align/BSNT_03246___ilvA.1.5803.seq
# -bsequence dna-align/BL03302___ilvA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03246___ilvA-BL03302___ilvA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03246___ilvA-BL03302___ilvA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03246___ilvA
# 2: BL03302___ilvA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1279
# Identity: 976/1279 (76.3%)
# Similarity: 976/1279 (76.3%)
# Gaps: 20/1279 ( 1.6%)
# Score: 3643.0
#
#
#=======================================
BSNT_03246___ 1 ATGAAACCGTTGCTTAAAGAAAACTCTCTCATCCAAGTGAAAGACATTTT 50
||||||||||||||||||||||||||||||||||||||.|||||||||||
BL03302___ilv 1 ATGAAACCGTTGCTTAAAGAAAACTCTCTCATCCAAGTCAAAGACATTTT 50
BSNT_03246___ 51 GAAGGCTCACCAAAACGTAAAGGACGTTGTCATTCACACACCTTTGCAGA 100
.||.||.||||||||.|||||.||.|||||.|||||.||.|||.|.||.|
BL03302___ilv 51 AAAAGCCCACCAAAATGTAAAAGATGTTGTTATTCATACCCCTCTCCAAA 100
BSNT_03246___ 101 GGAATGACAGACTTTCTGAGAGATATGAATGCAATATCTATTTAAAACGC 150
..|||||.||.||.||.|||||.||.||.|||||..|.|||||||||.|.
BL03302___ilv 101 AAAATGAGAGGCTGTCCGAGAGGTACGATTGCAACGTATATTTAAAAAGA 150
BSNT_03246___ 151 GAAGACTTGCAAGTTGTCAGATCTTTTAAGCTCAGAGGGGCTTATCATAA 200
||||||.||||.||||||.|.||||||||.||.|||||.||.|||.||||
BL03302___ilv 151 GAAGACCTGCAGGTTGTCCGCTCTTTTAAACTGAGAGGCGCCTATTATAA 200
BSNT_03246___ 201 AATGAAACAGCTTTCCAGCGAGCAGACAGAGAACGGAGTTGTGTGTGCAA 250
||||||.||||||||.|..||...|||..|.|||||.||.||.||.||.|
BL03302___ilv 201 AATGAAGCAGCTTTCAAAAGAAACGACGAAAAACGGGGTGGTCTGCGCCA 250
BSNT_03246___ 251 GTGCCGGAAACCACGCTCAAGGTGTGGCATTTTCGTGTAAACATCTTGGC 300
||||.||||||||.||.||.||.||.||.|||||.||.||||||||.||.
BL03302___ilv 251 GTGCAGGAAACCATGCGCAGGGAGTCGCTTTTTCCTGCAAACATCTCGGT 300
BSNT_03246___ 301 ATTCACGGAAAAATTTTTATGCCGTCTACTACACCGAGACAAAAAGTATC 350
|||||||||||.||||||||||||||.||.||.|||||.||||||.|.||
BL03302___ilv 301 ATTCACGGAAAGATTTTTATGCCGTCGACGACCCCGAGGCAAAAAATTTC 350
BSNT_03246___ 351 TCAAGTTGAACTATTCGGAAAAGGATTTATCGACATTATTTTGACAGGCG 400
.|||||.|||.|.|||||.||.|.||...||||.||.||..|||||||||
BL03302___ilv 351 CCAAGTCGAATTGTTCGGCAAGGAATACGTCGAGATCATCCTGACAGGCG 400
BSNT_03246___ 401 ATACGTTTGACGACGCGTATAAAAGCGCTGCTGAATGCTGTGAGGCGGAA 450
|.||||||||.||.||.|||.|||||||.|..|..|||||.||||..|||
BL03302___ilv 401 ACACGTTTGATGATGCTTATCAAAGCGCAGTCGCCTGCTGCGAGGAAGAA 450
BSNT_03246___ 451 TCTCGGACGTTTATCCATCCGTTCGATGATCCGGATGTGATGGCCGGACA 500
...||..|.||||||||.|||||.||.|||||.|..||.|||||.||.||
BL03302___ilv 451 AAGCGCGCATTTATCCACCCGTTTGACGATCCTGCCGTCATGGCTGGCCA 500
BSNT_03246___ 501 GGGAACGCTCGCAGTCGAGATTTTAAACGACATTGATACAGAACCGCATT 550
|||.|||.||||.|||||.||.||||||||.||.||.||.|||||.||||
BL03302___ilv 501 GGGTACGGTCGCGGTCGAAATCTTAAACGATATCGAAACGGAACCCCATT 550
BSNT_03246___ 551 TTCTTTTTGCAAGTGTCGGTGGCGGCGGCCTTCTCTCTGGGGTAGGTACA 600
.|.|.||.|||||.||.||.||.||.||.||.||.||.||.||.||.||.
BL03302___ilv 551 ATTTATTCGCAAGCGTAGGCGGAGGGGGTCTGCTTTCAGGAGTGGGAACC 600
BSNT_03246___ 601 TATTTGAAAAACGTGTCTCCTGATACAAAGGTAATTGCTGTTGAGCC--- 647
|||.|||||||||||||.||.|||||||||.|.||.||.||||||||
BL03302___ilv 601 TATATGAAAAACGTGTCCCCGGATACAAAGCTGATCGCGGTTGAGCCTAA 650
BSNT_03246___ 648 -GGCGGGAGCGGCATCCTACTTTGAATCAAACAAAGCTGGGCATGTCGTC 696
||||.| .|||| ||.| |||||||||||||||...||..|.||||||
BL03302___ilv 651 AGGCGCG-CCGGC-TCTT--TTTGAATCAAACAAAAAAGGCGAAGTCGTC 696
BSNT_03246___ 697 ACACTTGATAAAATTGATAAGTTTGTAGATGGTGCGGCTGTTAAAAAAAT 746
|..|||||.|||||.|||||.|||||.|||||.||.|||||..|.|||||
BL03302___ilv 697 ATCCTTGAGAAAATCGATAAATTTGTCGATGGAGCCGCTGTGCAGAAAAT 746
BSNT_03246___ 747 TGGCGAAGAAACCTTCCGGACGCTGGAAACTGTCGTTGATGACATTCTCC 796
.||||||||.||.||....|||||.|||||.||.||.|||||.|||.|.|
BL03302___ilv 747 CGGCGAAGAGACATTTAAAACGCTTGAAACCGTTGTCGATGATATTTTGC 796
BSNT_03246___ 797 TTGTGCCTGAAGGAAAAGTATGTACATCCATTCTTGAATTATATAACGAA 846
|.||.|||||||||||.||.||.||..|.||||||||..|.||.|||.||
BL03302___ilv 797 TCGTTCCTGAAGGAAAGGTGTGCACCGCGATTCTTGAGCTGTACAACCAA 846
BSNT_03246___ 847 TGTGCGGTTGTTGCTGAACCGGCTGGAGCTCTTTCTGTCGCAGCGCTT-- 894
||.|||.||||.||.|||||.||.|||||.||..|..|||| |||||
BL03302___ilv 847 TGCGCGATTGTCGCCGAACCTGCGGGAGCGCTGCCGATCGC--CGCTTTA 894
BSNT_03246___ 895 GATTTGTACAAGGATGAAATTAAAGGGAAAAACGTGGTGTGTGTGGTAAG 944
|||.|.||||.|||||||||||||||||||||.||.||.||..|.||.||
BL03302___ilv 895 GATCTTTACAGGGATGAAATTAAAGGGAAAAATGTCGTATGCATTGTGAG 944
BSNT_03246___ 945 CGGGGGCAATAACGATATCGGAAGAATGCAGGAAATGAAGGAGCGTTCCT 994
|||.||.||.|||||||||||.||||||||||||||.||.||..|.||..
BL03302___ilv 945 CGGAGGAAACAACGATATCGGCAGAATGCAGGAAATCAAAGACAGATCGA 994
BSNT_03246___ 995 TGATTTTTGAAGGTCTTCAGCATTATTTTATCGTCAACTTTCCGCAAAGA 1044
||||.|.||||||.||.|||||||||||.|||||.|||||.||||||||.
BL03302___ilv 995 TGATGTATGAAGGACTCCAGCATTATTTCATCGTGAACTTCCCGCAAAGG 1044
BSNT_03246___ 1045 GCGGGGGCGCTCCGCGAATTTCTTGACGAAGTCCTCGGACCGAATGATGA 1094
|||||.||..|.|||||||||.|.||.|||||.|||||.||||..||.||
BL03302___ilv 1045 GCGGGAGCTTTGCGCGAATTTTTAGATGAAGTGCTCGGGCCGACCGACGA 1094
BSNT_03246___ 1095 CATTACAAGGTTTGAATATACGAAGAAAAATAATAAAAGCAATGGACCTG 1144
.||.||..|||||||||||||||||||||||||||||||||..||.||||
BL03302___ilv 1095 TATCACCCGGTTTGAATATACGAAGAAAAATAATAAAAGCAGCGGCCCTG 1144
BSNT_03246___ 1145 CTCTTGTCGGCATCGA---GCTGCAGAACAAAGCCGATTATGGGCCGCTG 1191
|.||.||||||||||| |..||||..|.|| |||||.|.|||||||
BL03302___ilv 1145 CGCTCGTCGGCATCGAATTGAAGCAGCGCGAA---GATTACGAGCCGCTG 1191
BSNT_03246___ 1192 ATTGAACGGATGAACAAAAAACCGTTTCATTATGTAGAGGTGAACAAGGA 1241
||.|.|.|.|||.|||..|||...||.|..|||||.||.||.||.||.||
BL03302___ilv 1192 ATCGCAAGAATGGACAGGAAAGGCTTCCGCTATGTCGAAGTCAATAAAGA 1241
BSNT_03246___ 1242 TG-AGGACTTGTTCCATTTGCTAATCTAA 1269
|| |||.| |.||.||||||||.||.|||
BL03302___ilv 1242 TGAAGGGC-TCTTTCATTTGCTGATTTAA 1269
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