Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04450 and BL03290
See
Amino acid alignment /
Visit
BSNT_04450 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:38
# Commandline: needle
# -asequence dna-align/BSNT_04450___ytmB.1.5803.seq
# -bsequence dna-align/BL03290.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04450___ytmB-BL03290.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04450___ytmB-BL03290.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04450___ytmB
# 2: BL03290
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity: 169/249 (67.9%)
# Similarity: 169/249 (67.9%)
# Gaps: 12/249 ( 4.8%)
# Score: 529.0
#
#
#=======================================
BSNT_04450___ 1 TTGGGAATGCCTGTTGAATTTAATACACTGATTGTGACAAAAGGAAAAGA 50
.||||||||||.|||||||||||.||..||||||||||||||||||||||
BL03290 1 GTGGGAATGCCAGTTGAATTTAACACGATGATTGTGACAAAAGGAAAAGA 50
BSNT_04450___ 51 AGTTCGCATAGATGAAAATATATTCACGTTAGAGAAGGACGGATACCGAG 100
|...||..|.||.||||||.|.||.||..|.|||||.||.||.||.||.|
BL03290 51 AACGCGGGTTGAGGAAAATGTGTTTACACTCGAGAAAGAAGGTTATCGGG 100
BSNT_04450___ 101 TATATCC----GATGGAGATTCCAATGGATGTACGCAAAACAAAGTTTGG 146
|.||.|| .||| |.||..|.||.||..|.||.||.|||...||
BL03290 101 TTTACCCTCTTCATG----TGCCGCTTGAAGTCAGAAAGACCAAGCGGGG 146
BSNT_04450___ 147 CGAAAAGTCAGGCACAGCTGAAGTGCAGAAGCTTCAATGGGAAGACGGCC 196
|||.|...|.|||||.||..|.|.|.||...|||.|||||..||||||.|
BL03290 147 CGACATTACCGGCACCGCGCAGGCGGAGCGCCTTGAATGGTCAGACGGAC 196
BSNT_04450___ 197 GGACCATCATT--ACATACAAGCTGACTTCTTTGCATTCCGTCAATTAA 243
|||| ||||| |||||||.|||....||.||..|||||...||||||
BL03290 197 GGAC--TCATTTAACATACAGGCTCGTATCATTAAATTCCACGAATTAA 243
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.