Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04450 and BL03290

See Amino acid alignment / Visit BSNT_04450 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:38
# Commandline: needle
#    -asequence dna-align/BSNT_04450___ytmB.1.5803.seq
#    -bsequence dna-align/BL03290.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04450___ytmB-BL03290.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04450___ytmB-BL03290.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04450___ytmB
# 2: BL03290
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     169/249 (67.9%)
# Similarity:   169/249 (67.9%)
# Gaps:          12/249 ( 4.8%)
# Score: 529.0
# 
#
#=======================================

BSNT_04450___      1 TTGGGAATGCCTGTTGAATTTAATACACTGATTGTGACAAAAGGAAAAGA     50
                     .||||||||||.|||||||||||.||..||||||||||||||||||||||
BL03290            1 GTGGGAATGCCAGTTGAATTTAACACGATGATTGTGACAAAAGGAAAAGA     50

BSNT_04450___     51 AGTTCGCATAGATGAAAATATATTCACGTTAGAGAAGGACGGATACCGAG    100
                     |...||..|.||.||||||.|.||.||..|.|||||.||.||.||.||.|
BL03290           51 AACGCGGGTTGAGGAAAATGTGTTTACACTCGAGAAAGAAGGTTATCGGG    100

BSNT_04450___    101 TATATCC----GATGGAGATTCCAATGGATGTACGCAAAACAAAGTTTGG    146
                     |.||.||    .|||    |.||..|.||.||..|.||.||.|||...||
BL03290          101 TTTACCCTCTTCATG----TGCCGCTTGAAGTCAGAAAGACCAAGCGGGG    146

BSNT_04450___    147 CGAAAAGTCAGGCACAGCTGAAGTGCAGAAGCTTCAATGGGAAGACGGCC    196
                     |||.|...|.|||||.||..|.|.|.||...|||.|||||..||||||.|
BL03290          147 CGACATTACCGGCACCGCGCAGGCGGAGCGCCTTGAATGGTCAGACGGAC    196

BSNT_04450___    197 GGACCATCATT--ACATACAAGCTGACTTCTTTGCATTCCGTCAATTAA    243
                     ||||  |||||  |||||||.|||....||.||..|||||...||||||
BL03290          197 GGAC--TCATTTAACATACAGGCTCGTATCATTAAATTCCACGAATTAA    243


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