Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04460 and BL03286
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence dna-align/BSNT_04460___ytkC.1.5803.seq
# -bsequence dna-align/BL03286___ytkC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04460___ytkC-BL03286___ytkC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04460___ytkC-BL03286___ytkC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04460___ytkC
# 2: BL03286___ytkC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 421
# Identity: 279/421 (66.3%)
# Similarity: 279/421 (66.3%)
# Gaps: 32/421 ( 7.6%)
# Score: 787.0
#
#
#=======================================
BSNT_04460___ 1 ATGGATAGAGACTTTGGCATCTTTTCG-TTTTTAGCAGTCAGCGTTTCAG 49
|||..||..|||||..||||||||||| |.|||| ||.|..|..|.||.|
BL03286___ytk 1 ATGTTTAAGGACTTAAGCATCTTTTCGCTCTTTA-CAATTGGTTTATCGG 49
BSNT_04460___ 50 -CAGCGGGTTTTTTCTTTGGAGGTTTTCAGTATTCATTTCTGATTTTGCT 98
||.| ||.|||||.|||||..|..|..|.||||.||||.||||.||..|
BL03286___ytk 50 CCATC-GGATTTTTGTTTGGCCGAATCGAATATTTATTTATGATCTTAAT 98
BSNT_04460___ 99 CTCTCTTATGGCAATTGAATTTATCAGTACGACTTTGAAGGAA------- 141
..|.||.||||..|||||||||.||||.|..|..|||||.|||
BL03286___ytk 99 TACGCTGATGGGCATTGAATTTGTCAGCAAAAGCTTGAACGAATGTGTGG 148
BSNT_04460___ 142 ACCAT-TATTCACAAACTGTCATTTAAAAAGGTATTTGCCCGGCTTGTCA 190
|..|| .|||.|||| ||||.|.|.|.|||.|..||||.|..|
BL03286___ytk 149 AAGATCGATTTACAA--------TTAAGAGGCTGTTTACAAGGCTGGCGA 190
BSNT_04460___ 191 AAAAATTAGTCACGCTGGCTCTGATCTCTGTATG-CCACTTTTTTGATCA 239
|||||||.||.|||||...||||||.||.|| || ||||.||||||||||
BL03286___ytk 191 AAAAATTGGTTACGCTCTTTCTGATATCCGT-TGCCCACCTTTTTGATCA 239
BSNT_04460___ 240 GCTGCTG-AATACACAGG--GATCAATTCGTGACTTGGCTATTATGTTTT 286
..||||| || ||||| |.||.||.||.||.||..||||||||||||
BL03286___ytk 240 AATGCTGCAA---ACAGGCAGTTCGATCCGCGATTTTTCTATTATGTTTT 286
BSNT_04460___ 287 ATATTCTTTATGAATCTGTGCAAATTGTTGTG-ACAGC-CAGTTCTCTTG 334
|||||.|.||||||.|..|.|||||.| ||.| ||.|| || |||..|.|
BL03286___ytk 287 ATATTTTATATGAAGCGTTTCAAATCG-TGAGCACGGCTCA-TTCGTTAG 334
BSNT_04460___ 335 GCATACCGGTTCCTCAGATGCTTGTCGATCTTTTAGAAACGTTAAAAAAT 384
|.||.||.||.||.||||||.|..|.||..|||||.|.||..||||..|.
BL03286___ytk 335 GAATCCCCGTGCCGCAGATGTTATTGGACATTTTAAATACCATAAAGGAA 384
BSNT_04460___ 385 AAATTTAAGCGCAAACCGTAA 405
|||.|...|.|.||.||||||
BL03286___ytk 385 AAACTCCGGGGAAAGCCGTAA 405
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