Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01048 and BL03283
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:34
# Commandline: needle
# -asequence dna-align/BSNT_01048___groEL.1.5803.seq
# -bsequence dna-align/BL03283___groEL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01048___groEL-BL03283___groEL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01048___groEL-BL03283___groEL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01048___groEL
# 2: BL03283___groEL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1635
# Identity: 1425/1635 (87.2%)
# Similarity: 1425/1635 (87.2%)
# Gaps: 3/1635 ( 0.2%)
# Score: 6286.0
#
#
#=======================================
BSNT_01048___ 1 ATGGCAAAAGAAATTAAGTTTAGTGAAGAAGCTCGCCGCGCAATGCTTCG 50
|||||||||||.|||||||||||.||||||||.|||||..|||||||.||
BL03283___gro 1 ATGGCAAAAGATATTAAGTTTAGCGAAGAAGCCCGCCGTTCAATGCTGCG 50
BSNT_01048___ 51 CGGTGTCGATGCACTTGCTGATGCTGTTAAAGTAACTTTAGGACCAAAAG 100
||||||.||||||.|.||.||||||||.||.||||||||.|||||.||||
BL03283___gro 51 CGGTGTAGATGCATTGGCGGATGCTGTAAAGGTAACTTTGGGACCTAAAG 100
BSNT_01048___ 101 GACGCAACGTGGTTCTAGAGAAAAAATTCGGTTCTCCGTTAATCACAAAT 150
||||||||||.|||||.||||||||||||||||||||.|||||||||||.
BL03283___gro 101 GACGCAACGTCGTTCTTGAGAAAAAATTCGGTTCTCCATTAATCACAAAC 150
BSNT_01048___ 151 GACGGTGTAACAATCGCTAAAGAAATCGAGCTTGAAGATGCGTTTGAAAA 200
|||||||||||.|||||.||||||||||||||||||||.|||||.|||||
BL03283___gro 151 GACGGTGTAACCATCGCGAAAGAAATCGAGCTTGAAGACGCGTTCGAAAA 200
BSNT_01048___ 201 CATGGGTGCGAAGCTTGTAGCTGAAGTAGCCAGCAAAACAAACGACGTTG 250
||||||.||.||||||||.||||||||.||.||||||||||||||.||||
BL03283___gro 201 CATGGGCGCAAAGCTTGTTGCTGAAGTTGCGAGCAAAACAAACGATGTTG 250
BSNT_01048___ 251 CCGGTGACGGTACAACAACTGCGACAGTTCTTGCGCAAGCAATGATCCGT 300
|||||||||||||||||||.|||||||||||.||.||.||.|||||.||.
BL03283___gro 251 CCGGTGACGGTACAACAACAGCGACAGTTCTAGCTCAGGCGATGATTCGC 300
BSNT_01048___ 301 GAAGGCCTTAAAAACGTAACAGCGGGCGCTAACCCTGTAGGCGTGCGTAA 350
|||||.||||||||||||||.||.|||||||||||||||||||||||.||
BL03283___gro 301 GAAGGTCTTAAAAACGTAACTGCCGGCGCTAACCCTGTAGGCGTGCGCAA 350
BSNT_01048___ 351 AGGGATGGAACAAGCTGTAGCGGTTGCGATCGAAAACTTAAAAGAAATTT 400
|||.||.||.||.|||||.||.||.||..|.||||.|.|.||||||||.|
BL03283___gro 351 AGGTATCGAGCAGGCTGTGGCTGTAGCTGTTGAAAGCCTGAAAGAAATCT 400
BSNT_01048___ 401 CTAAGCCAATCGAAGGCAAAGAGTCTATCGCTCAGGTTGCTGCGATCTCT 450
||||.|||||.|||||||||||.||.|||||.||.||||||.|.|||||.
BL03283___gro 401 CTAAACCAATTGAAGGCAAAGAATCAATCGCACAAGTTGCTTCAATCTCC 450
BSNT_01048___ 451 GCTGCTGATGAGGAAGTCGGAAGCCTTATCGCTGAAGCAATGGAGCGCGT 500
|||||.||.||.||||||||||||||.|||||||||||||||||||||||
BL03283___gro 451 GCTGCAGACGAAGAAGTCGGAAGCCTGATCGCTGAAGCAATGGAGCGCGT 500
BSNT_01048___ 501 AGGAAACGACGGCGTTATCACAATCGAAGAGTCTAAAGGCTTCACAACTG 550
.||.||||||||.||||||||.||||||||.||.|||||.||||||||.|
BL03283___gro 501 CGGCAACGACGGTGTTATCACGATCGAAGAATCCAAAGGATTCACAACAG 550
BSNT_01048___ 551 AGCTTGAAGTTGTTGAAGGTATGCAATTCGACCGCGGATATGCGTCTCCT 600
||||||||||.||||||||||||||.||||||||||||||||||||||||
BL03283___gro 551 AGCTTGAAGTGGTTGAAGGTATGCAGTTCGACCGCGGATATGCGTCTCCT 600
BSNT_01048___ 601 TACATGGTAACTGACTCTGATAAGATGGAAGCGGTTCTTGACAATCCTTA 650
||||||||.||.||.||.|||||||||||||||||||||||.|||||.||
BL03283___gro 601 TACATGGTGACGGATTCCGATAAGATGGAAGCGGTTCTTGAGAATCCGTA 650
BSNT_01048___ 651 CATCTTAATCACAGACAAAAAAATCACAAACATTCAAGAAATCCTTCCTG 700
|||||||.|.|||||||||||||||||||||||||||||||||||.||.|
BL03283___gro 651 CATCTTAGTAACAGACAAAAAAATCACAAACATTCAAGAAATCCTGCCGG 700
BSNT_01048___ 701 TGCTTGAGCAGGTTGTTCAGCAAGGCAAACCATTGCTTCTGATCGCTGAG 750
||||||||||.||.||.||.|||||||||||.|||||||||||.|||||.
BL03283___gro 701 TGCTTGAGCAAGTCGTGCAACAAGGCAAACCGTTGCTTCTGATTGCTGAA 750
BSNT_01048___ 751 GATGTTGAAGGCGAAGCACTTGCAACACTTGTTGTGAACAAACTTCGCGG 800
||.||||||||.|||||.|||||||||.|.|||||.|||||.||||||||
BL03283___gro 751 GACGTTGAAGGTGAAGCTCTTGCAACATTGGTTGTCAACAAGCTTCGCGG 800
BSNT_01048___ 801 CACATTCAACGCAGTTGCTGTTAAAGCTCCTGGCTTCGGTGACCGCCGTA 850
.||||||||||||||.|||||||||||.|||||.|||||.||||||||.|
BL03283___gro 801 AACATTCAACGCAGTGGCTGTTAAAGCGCCTGGATTCGGCGACCGCCGCA 850
BSNT_01048___ 851 AAGCAATGCTTGAAGACATCGCTGTCCTTACTGGCGGAGAAGTCATCACA 900
||||.|||||.|||||||||.||.||||.||.||||..|||||.||||||
BL03283___gro 851 AAGCGATGCTCGAAGACATCTCTATCCTGACAGGCGCCGAAGTGATCACA 900
BSNT_01048___ 901 GAAGATCTTGGCCTTGACCTGAAATCTACTCAAATCGCTCAATTGGGACG 950
||||||.|.||.||||||||.|||||.|||||||||..||||||||||||
BL03283___gro 901 GAAGATTTAGGTCTTGACCTTAAATCAACTCAAATCAATCAATTGGGACG 950
BSNT_01048___ 951 CGCTTCTAAAGTTGTCGTTACTAAAGAAAACACAACAATCGTTGAAGGCG 1000
|||||||||||||||.|||||.|||||||||||||||||.||||||||.|
BL03283___gro 951 CGCTTCTAAAGTTGTTGTTACAAAAGAAAACACAACAATTGTTGAAGGTG 1000
BSNT_01048___ 1001 CTGGCGAAACAGACAAAATTTCTGCCCGCGTGACTCAAATCCGCGCTCAA 1050
|.||.||.|||||..||||..|.||.|||||.|..|||||||||||||||
BL03283___gro 1001 CGGGAGATACAGAGCAAATCGCGGCACGCGTCAACCAAATCCGCGCTCAA 1050
BSNT_01048___ 1051 GTGGAAGAAACAACTTCTGAATTCGACAGAGAAAAATTACAAGAGCGTCT 1100
||.|||||||||||||||||.|||||.|.|||||||||||||||.||.||
BL03283___gro 1051 GTTGAAGAAACAACTTCTGAGTTCGATAAAGAAAAATTACAAGAACGCCT 1100
BSNT_01048___ 1101 TGCTAAACTTGCTGGCGGCGTAGCTGTCATCAAAGTCGGCGCTGCGACTG 1150
||||||.|||||.||||||||||||||||||||||||||.||||||||||
BL03283___gro 1101 TGCTAAGCTTGCAGGCGGCGTAGCTGTCATCAAAGTCGGAGCTGCGACTG 1150
BSNT_01048___ 1151 AAACTGAACTGAAAGAGCGTAAACTTCGCATCGAAGACGCCCTGAACTCA 1200
||||.|||.|||||||.||.||.||||||||||||||||||||||||||.
BL03283___gro 1151 AAACAGAATTGAAAGAACGCAAGCTTCGCATCGAAGACGCCCTGAACTCT 1200
BSNT_01048___ 1201 ACTCGCGCAGCTGTTGAAGAAGGCATCGTATCCGGTGGTGGTACAGCGCT 1250
||||||||.||.||.||||||||.|||||||||||.|||||||||||.||
BL03283___gro 1201 ACTCGCGCTGCGGTAGAAGAAGGAATCGTATCCGGCGGTGGTACAGCTCT 1250
BSNT_01048___ 1251 TGTAAACGTATATAATAAAGTCGCTGCAGTTGAAGCTGAAGGCGATGCTC 1300
|||.||.||.||.||||||||.|||||..||||||||||||||||.|..|
BL03283___gro 1251 TGTCAATGTTTACAATAAAGTAGCTGCCCTTGAAGCTGAAGGCGACGAAC 1300
BSNT_01048___ 1301 AAACAGGTATCAACATCGTGCTTCGCGCGCTTGAAGAGCCAATCCGTCAA 1350
..||.||||||||||||||.||||||||.||||||||.||||||||||||
BL03283___gro 1301 TGACTGGTATCAACATCGTTCTTCGCGCTCTTGAAGAACCAATCCGTCAA 1350
BSNT_01048___ 1351 ATCGCACACAATGCTGGTCTTGAAGGATCTGTCATCGTTGAACGCCTCAA 1400
|||||.|||||.||.||||||||||||||||||||||||||.|||||.||
BL03283___gro 1351 ATCGCGCACAACGCGGGTCTTGAAGGATCTGTCATCGTTGAGCGCCTGAA 1400
BSNT_01048___ 1401 AAACGAAGAAATCGGCGTAGGCTTCAACGCTGCAACTGGCGAATGGGTAA 1450
|||.||||||||||||||.||||.||||||||||||.|||||||||||.|
BL03283___gro 1401 AAATGAAGAAATCGGCGTCGGCTACAACGCTGCAACAGGCGAATGGGTGA 1450
BSNT_01048___ 1451 ACATGATCGAAAAAGGTATCGTTGACCCAACGAAAGTTACACGCTCAGCT 1500
||||||||||.|||||||||||||||||.||.|||||.||||||||||||
BL03283___gro 1451 ACATGATCGACAAAGGTATCGTTGACCCTACAAAAGTAACACGCTCAGCT 1500
BSNT_01048___ 1501 CTTCAAAACGCTGCGTCTGTAGCTGCAATGTTCTTAACAACTGAAGCCGT 1550
||.||||||||.||.||||||||.||.||||||.|.|||||||||||.||
BL03283___gro 1501 CTGCAAAACGCAGCATCTGTAGCGGCTATGTTCCTGACAACTGAAGCAGT 1550
BSNT_01048___ 1551 TGTCGCTGACAAGCCAGAAGAAAACGCTGGCGGC---GGAATGCCTGATA 1597
|||.||.|||||.||.|||||||||...|||||| |||||||||||.|
BL03283___gro 1551 TGTTGCCGACAAACCGGAAGAAAACAAAGGCGGCGCAGGAATGCCTGACA 1600
BSNT_01048___ 1598 TGGGCGGCATGGGCGGTATGGGCGGAATGATGTAA 1632
||||||||||||||||.||||||||.|||||||||
BL03283___gro 1601 TGGGCGGCATGGGCGGCATGGGCGGCATGATGTAA 1635
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