Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00193 and BL03269
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence dna-align/BSNT_00193___cysS.1.5803.seq
# -bsequence dna-align/BL03269___cysS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00193___cysS-BL03269___cysS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00193___cysS-BL03269___cysS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00193___cysS
# 2: BL03269___cysS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1416
# Identity: 1080/1416 (76.3%)
# Similarity: 1080/1416 (76.3%)
# Gaps: 27/1416 ( 1.9%)
# Score: 4038.0
#
#
#=======================================
BSNT_00193___ 1 ATGACAATCACACTTTATAATACATTGACTAGACAGAAGGAAACATTCGT 50
.|||||.|.|||.|.||||||||..|.||..||.|.||.||..|.||.||
BL03269___cys 1 GTGACACTAACATTGTATAATACTCTCACACGAAAAAAAGAGCCGTTTGT 50
BSNT_00193___ 51 TCCTCTTGAAGAGGGAAAAGTGAAAATGTATGTATGCGGACCCACGGTTT 100
.|||||||||||.||.||.||.|||||||||||.|||||.||.||.||.|
BL03269___cys 51 GCCTCTTGAAGAAGGCAAGGTCAAAATGTATGTGTGCGGTCCGACAGTAT 100
BSNT_00193___ 101 ACAATTACATTCATATCGGGAACGCGCGTCCGGCAATCGTTTACGATACG 150
|.||.|||||.||||||||.|||||..|.|||||.|||||.|..||.||.
BL03269___cys 101 ATAACTACATCCATATCGGAAACGCAAGGCCGGCTATCGTGTTTGACACT 150
BSNT_00193___ 151 GTTCGAAACTATTTAGAGTATAAAGGCTATGATGTGCAGTATGTCTCTAA 200
||..||||.|||||||||||||||||||||||.||.||.||||||||.||
BL03269___cys 151 GTCAGAAAGTATTTAGAGTATAAAGGCTATGAAGTCCAATATGTCTCCAA 200
BSNT_00193___ 201 CTTCACAGACGTAGACGATAAATTAATTAAAGCGGCAAATGAACTCGGTG 250
.||.|||||.||.||.||.||||||||||||||||||||||||||.||.|
BL03269___cys 201 TTTTACAGATGTCGATGACAAATTAATTAAAGCGGCAAATGAACTTGGAG 250
BSNT_00193___ 251 AGGATGTACCCACCATTTCAGAGCGTTTTATTAAAGCATACTTTGAAGAC 300
||||.||.||...|||..|.||.||.||||||||.||||||||.|||||.
BL03269___cys 251 AGGAAGTGCCGGTCATCGCCGAACGCTTTATTAAGGCATACTTCGAAGAT 300
BSNT_00193___ 301 GTAGGTGCGCTCGGCTGCCGAAAAGCCGACCTTCATCCGCGAGTAATGGA 350
||.|||.|.||.||||||..||||||.|||...||||||||.||.|..||
BL03269___cys 301 GTCGGTTCACTGGGCTGCACAAAAGCTGACTGCCATCCGCGCGTCACTGA 350
BSNT_00193___ 351 GAACATGGATGCCATTATCGA----ATTCGTAGA-TCAGCTCGTGAAAAA 395
.||||||||||..||.||||| |||| ||| .|.|.||| |.||
BL03269___cys 351 AAACATGGATGAGATCATCGACTTTATTC--AGACGCTGATCG---ATAA 395
BSNT_00193___ 396 GGGCTACGCATATGAATCAGAAGGTGACGTATATTTCAAAACCAGAGCGT 445
||||||.||.|||||..|.||.||.||.||.||||..|||||.|||.|||
BL03269___cys 396 GGGCTATGCCTATGAGGCGGACGGAGATGTTTATTATAAAACAAGATCGT 445
BSNT_00193___ 446 TTGAAGGGTACGGAAAGCTTTCTCAGCAATCAATCGATGAACTAAGATCA 495
|||||||.||.||||||||.||.||.|||||..|||||||.||.||||||
BL03269___cys 446 TTGAAGGCTATGGAAAGCTGTCGCATCAATCGGTCGATGAGCTGAGATCA 495
BSNT_00193___ 496 GGTGCACGCATCCGGGTCGGCGAGAAAAAAGAAGATGCTCTTGATTTCGC 545
||.||.||.||.|..||.|||||.||.|||||||||||.||.|||||..|
BL03269___cys 496 GGCGCCCGAATTCAAGTGGGCGAAAAGAAAGAAGATGCGCTCGATTTTAC 545
BSNT_00193___ 546 ACTGTGGAAAGCGGCAAAAGAAGGAGAAATCTCTTGGGATAGCCCTTGGG 595
|||.|||||||||||.|||||....||||||||.||||||||||||||||
BL03269___cys 546 ACTATGGAAAGCGGCTAAAGATAACGAAATCTCCTGGGATAGCCCTTGGG 595
BSNT_00193___ 596 GGAAAGGACGTCCGGGCTGGCACATTGAATGCTCAGCAATGGTGAAAAAG 645
|.|||||.|||||.||||||||.||.||.|||||.||.||||.||.|||.
BL03269___cys 596 GAAAAGGCCGTCCCGGCTGGCATATCGAGTGCTCTGCGATGGCGAGAAAA 645
BSNT_00193___ 646 TATCTCGGTGACCAGATTGATATCCATGCGGGCGGACAGGATTTAACATT 695
|||||.||.||...|||.||.||.||.||.|||||.||||||.|..|.||
BL03269___cys 646 TATCTGGGCGATTCGATCGACATTCACGCCGGCGGTCAGGATCTGGCCTT 695
BSNT_00193___ 696 CCCTCACCATGAAAACGAAATTGCGCAATCTGAGGCGCTGACAGGCAAAA 745
|||.||.|||||||||||||||||.|||||.||.||..|.|||||.||..
BL03269___cys 696 CCCGCATCATGAAAACGAAATTGCCCAATCGGAAGCATTAACAGGGAAGC 745
BSNT_00193___ 746 CGTTTGCGAAGTACTGGCTTCATAATGGTTATATCAATATTGATAATGAA 795
|.||.|||||.||.|||||||||||.||.||.||.|||||.||||||||.
BL03269___cys 746 CTTTCGCGAAATATTGGCTTCATAACGGCTACATTAATATCGATAATGAG 795
BSNT_00193___ 796 AAAATGTCAAAATCACTAGGCAACTTTGTGCTTGTCCATGACATCATTAA 845
||||||||||||||.||.|||||||||||.|||||.||||||||.|||||
BL03269___cys 796 AAAATGTCAAAATCGCTCGGCAACTTTGTTCTTGTGCATGACATTATTAA 845
BSNT_00193___ 846 ACAGCATGATCCGCAGCTTTTGAGATTCTTTATGCTATCTGTTCATTATC 895
|.|||||||.||.||..|..||.|.||.||.|||||.|||||||||||..
BL03269___cys 846 AGAGCATGACCCCCAAGTGCTGCGGTTTTTCATGCTGTCTGTTCATTACA 895
BSNT_00193___ 896 GCCATCCGATTAACTATTCAGAAGAGCTTCTGGAGAATACGAAAAGCGCG 945
|.||||||||.||||||||.|..||.|||||.|||||.||.||||.|||.
BL03269___cys 896 GACATCCGATAAACTATTCGGTCGAACTTCTCGAGAACACAAAAAACGCT 945
BSNT_00193___ 946 TTCAACCGCTTAAAAACAGCGTACAGCAATCTTCAGCACCGTCTTAACAG 995
||....||..||||||||||.||.||||||.|.|||||.||.||.||.||
BL03269___cys 946 TTTGGACGTCTAAAAACAGCTTATAGCAATTTGCAGCATCGCCTAAAAAG 995
BSNT_00193___ 996 CAGTACGAATTTAACCGAAGATGACGAT---CAATGGCTTGAAAAAGTTG 1042
||||||.|||||||| |||.|.|||| .||||||||||||||.|.|
BL03269___cys 996 CAGTACAAATTTAAC---AGAGGGCGATTCAGAATGGCTTGAAAAAATCG 1042
BSNT_00193___ 1043 AAGAACACCGCAAAGCATTCGAAGAAGCGATGGACGATGATTTTAATACG 1092
||||.||.||.|||||.|||.||...||.|||||.||||||||.|||||.
BL03269___cys 1043 AAGAGCAGCGAAAAGCCTTCCAAACGGCTATGGATGATGATTTCAATACA 1092
BSNT_00193___ 1093 GCGAATGCCATTTCAGTCTTGTTTGACTTAGCGAAACACGCCAATTATTA 1142
||||||||||||||.|||.||||||||.|.||.|||||.|||||.||.||
BL03269___cys 1093 GCGAATGCCATTTCCGTCCTGTTTGACCTGGCCAAACATGCCAACTACTA 1142
BSNT_00193___ 1143 TCTTCAG--AAAGATCATACGGCTGATCATGTGATTACGGCGTTTATTGA 1190
|.|.||| ||||| ||||.||.||.|||||.|||..|||||||||..|
BL03269___cys 1143 TTTGCAGGAAAAGA--ATACTGCAGAACATGTCATTCAGGCGTTTATACA 1190
BSNT_00193___ 1191 GATGTTTGACCGCAT-TGTTTCTGTCCTCGGTTTTTCGTTGGGTGAGCAG 1239
|.||||||||...|| || .||.||.|||||.||.||..|....||.|||
BL03269___cys 1191 GCTGTTTGACGAGATCTG-CTCAGTGCTCGGCTTCTCCCTCAAGGAACAG 1239
BSNT_00193___ 1240 GAACTTCTCGATCAAGAGATTGAAGACTTAATCGAAAAGCGAAATGAAGC 1289
||||||.|.|||.||||.||||||||..|.|||||.|||||.|||||.||
BL03269___cys 1240 GAACTTTTGGATAAAGACATTGAAGAACTGATCGAGAAGCGGAATGAGGC 1289
BSNT_00193___ 1290 GCGCCGGAATCGCGATTTTGCATTGTCAGACCAGATCCGCGACCAGCTGA 1339
.||..|.||.|||||.||||||...||.||.|||||.|||||||||.|||
BL03269___cys 1290 CCGGAGAAACCGCGACTTTGCAACATCTGATCAGATTCGCGACCAGTTGA 1339
BSNT_00193___ 1340 AAAGCATGAATATCATTCTT-GAAGATACGGCTCAAGGCACTCGCTGGAA 1388
|||||||||||||.| |||| ||.||.||..|.||.|||||.||||||||
BL03269___cys 1340 AAAGCATGAATATTA-TCTTGGAGGACACTCCGCAGGGCACGCGCTGGAA 1388
BSNT_00193___ 1389 ACGGGGAGAATAA--- 1401
|.|.|||||||.|
BL03269___cys 1389 AAGAGGAGAATCATAA 1404
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