Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00187 and BL03267
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:50
# Commandline: needle
# -asequence dna-align/BSNT_00187___gltX.1.5803.seq
# -bsequence dna-align/BL03267___gltX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00187___gltX-BL03267___gltX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00187___gltX-BL03267___gltX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00187___gltX
# 2: BL03267___gltX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1484
# Identity: 1144/1484 (77.1%)
# Similarity: 1144/1484 (77.1%)
# Gaps: 58/1484 ( 3.9%)
# Score: 4439.5
#
#
#=======================================
BSNT_00187___ 1 ATGGGAAACGAAGTACGCGTCCGTTATGCACCGAGTCCAACCGGACATTT 50
||||||||||||||.||.||.||||||||.|||||.|||||.||.|||||
BL03267___glt 1 ATGGGAAACGAAGTTCGGGTTCGTTATGCGCCGAGCCCAACAGGCCATTT 50
BSNT_00187___ 51 GCATATTGGAAATGCCAGAACGGCGCTTTTTAATTATTTATTTGCCCGCA 100
.|||||.||||||||||||||.||.||||||||||||||.||||||||.|
BL03267___glt 51 ACATATCGGAAATGCCAGAACCGCTCTTTTTAATTATTTGTTTGCCCGGA 100
BSNT_00187___ 101 ATCAAGGCGGTAAGTTTATCATTCGAGTTGAGGATACAGATAAAAAGCGC 150
..||||||||.||.||.|||||.||..||||.|||||.||....||||||
BL03267___glt 101 GCCAAGGCGGAAAATTCATCATCCGCATTGAAGATACGGACCGCAAGCGC 150
BSNT_00187___ 151 AATATTGAGGGCGGAGAACAAAGCCAGCTGAATTATCTGAAGTGGCTAGG 200
||.|||||.|||||.||.||||||||||||||.|||.|.||.|||||.||
BL03267___glt 151 AACATTGAAGGCGGGGAGCAAAGCCAGCTGAACTATTTAAAATGGCTGGG 200
BSNT_00187___ 201 TATTGACTGGGATGAGAGTGTGGATGTCGGAGGAGAGTACGGCCCATACC 250
.||.|||||||||||.||.|||||||||||||||||.|||||.|||||||
BL03267___glt 201 CATCGACTGGGATGAAAGCGTGGATGTCGGAGGAGAATACGGACCATACC 250
BSNT_00187___ 251 GTCAGTCAGAGCGTAACGATATCTATAAAGTGTACTATGAAGAGCTTCTT 300
|.||.||.||..|.|||||.||.||.|||...||.||.||.|||||||||
BL03267___glt 251 GCCAATCCGAAAGAAACGACATTTACAAAACATATTACGAGGAGCTTCTT 300
BSNT_00187___ 301 GAAAAAGGGCTTGCTTATAAATGTTACTGTACGGAAGAAGAGCTTGAAAA 350
|||||||||||.||.||.|||||.|||||.|||||||||||||||||.||
BL03267___glt 301 GAAAAAGGGCTAGCCTACAAATGCTACTGCACGGAAGAAGAGCTTGAGAA 350
BSNT_00187___ 351 AGAGCGTGAAGAACAGATTGCCCGCGGAGAAATGCCTCGTTATTCTGGAA 400
|||||||||.||||||..||||||||||||||||||.||.||.||.||.|
BL03267___glt 351 AGAGCGTGAGGAACAGGCTGCCCGCGGAGAAATGCCGCGCTACTCCGGCA 400
BSNT_00187___ 401 AACACAGAGACCTGACTCAGGAAGAACAGGA-------GAAATTTATCGC 443
|...|.|..|..|.||..|.|||||.||||| ||| ||
BL03267___glt 401 AGTGCCGCAATTTAACAAAAGAAGAGCAGGAAAAGCTCGAA-------GC 443
BSNT_00187___ 444 TGAAGGCAGAAAACCAAGTATTCGTTTCCGCGTGCCGGAAGGAAAAATCA 493
||||||.|||.|.||.||.||.||.||....|||||..||||..||.|||
BL03267___glt 444 TGAAGGAAGACAGCCGAGCATCCGCTTTAAAGTGCCTCAAGGTGAAGTCA 493
BSNT_00187___ 494 TCGCCTTCAATGATATCGTAAAAGGCGAAATTTCTTTTGAATCAGATGGC 543
||..|||..||||.|||||.|||||.|||||||||||||||.||||.||.
BL03267___glt 494 TCCGCTTTGATGACATCGTCAAAGGAGAAATTTCTTTTGAAACAGACGGA 543
BSNT_00187___ 544 ATCGGCGACTTTGTTATTGTGAAAAAGGACGGAACGCCGACTTACAACTT 593
|||||||||||.||.||.|||||.||.|||||||||||.|||||||||||
BL03267___glt 544 ATCGGCGACTTCGTCATCGTGAAGAAAGACGGAACGCCTACTTACAACTT 593
BSNT_00187___ 594 CGCGGTAGCGATTGATGACTACTTAATGAAAATGACACACGTGCTGCGCG 643
.||.||||||.|.||||||||.||||||||||||||.||.||.|||||||
BL03267___glt 594 TGCCGTAGCGGTCGATGACTATTTAATGAAAATGACGCATGTCCTGCGCG 643
BSNT_00187___ 644 GTGAGGATCATATTTCTAACACACCGAAACAGATTATGATTTATCAA-GC 692
|.||.||.||.|||||.||.||.||.||.|||||.|||||||| ||| ||
BL03267___glt 644 GCGAAGACCACATTTCCAATACGCCAAAGCAGATCATGATTTA-CAACGC 692
BSNT_00187___ 693 ATTCGGATGGGATATTCC-TCAGTTCGGACACATGACGCTGATTGTAAAC 741
..|.||.||||||||.|| .|| ||.|||||.|||||..|.||.||.||.
BL03267___glt 693 CCTTGGCTGGGATATCCCGGCA-TTTGGACATATGACATTAATCGTCAAT 741
BSNT_00187___ 742 GAAAGCCGTAAAAAGCTCAGTAAACGTGATGAATCCATTATTCAATTCAT 791
||||||||.|||||.||.||.|||||||||||.|||||.|||||.||.||
BL03267___glt 742 GAAAGCCGCAAAAAACTGAGCAAACGTGATGAGTCCATCATTCAGTTTAT 791
BSNT_00187___ 792 CGAGCAGTACAAAGAGCTTGGCTACCTGCCAGAAGCGCTGTTCAACTTTA 841
||||||||||.|||||||.|||||..||||.|||||..||||.|||||.|
BL03267___glt 792 CGAGCAGTACGAAGAGCTCGGCTATTTGCCGGAAGCATTGTTTAACTTCA 841
BSNT_00187___ 842 TCGGACTGCTAGGCTGGTCACCGGTTGGAGAAGAAGAGCTTTTCACAAAA 891
||...||.|||||||||||.|||||.|||||||||||.||.||.||||||
BL03267___glt 842 TCACTCTTCTAGGCTGGTCGCCGGTCGGAGAAGAAGAACTGTTTACAAAA 891
BSNT_00187___ 892 GAGCAGTTTATTGAAATTTTTGATGTAAATCGTTTATCTAAATCACCAGC 941
||.|||||||||||.||.|||||||||||.|||||.||.|||||||||||
BL03267___glt 892 GAACAGTTTATTGAGATATTTGATGTAAACCGTTTGTCAAAATCACCAGC 941
BSNT_00187___ 942 TTTGTTTGATATGCATAAGCTAAAATGGGTTAACAACCAATATGTGAAGA 991
..|||||||||.||||||.||.||||||||.||||||||.||||||||.|
BL03267___glt 942 GGTGTTTGATACGCATAAACTGAAATGGGTCAACAACCAGTATGTGAAAA 991
BSNT_00187___ 992 AGCTGGATCTTGATCAGGTTGTTGAACTGACGCTTCCGCATTTGCAAAAA 1041
|.||.||||||||||||||..|.|||.||||..|.|||||||||||||||
BL03267___glt 992 AACTTGATCTTGATCAGGTCATCGAATTGACCGTGCCGCATTTGCAAAAA 1041
BSNT_00187___ 1042 GCGGGCAAAGTTGGCACT-----GAGCTTTCTGCTGAA--GAACAAGAGT 1084
||||||||.||| | ||||||||.| |.| |||||.||.|
BL03267___glt 1042 GCGGGCAAGGTT-----TCAGAAGAGCTTTCAG--GCAGCGAACAGGAAT 1084
BSNT_00187___ 1085 GGGTTCGTAAACTGATTTCCCTGTATCATGAGCAATTAAGCTACGGTGCG 1134
||||.||.||.|||||||||||.|||||.||.||..|.||||||||.||.
BL03267___glt 1085 GGGTGCGCAAGCTGATTTCCCTATATCAGGAACAGCTGAGCTACGGCGCT 1134
BSNT_00187___ 1135 GAAATTGTTGAGCTGACTGATTTGTTCTTTACGGATGAGATCGAGTATAA 1184
|||||.||.|||.|.||.||.||||||||||..||.||.|||.|||||||
BL03267___glt 1135 GAAATCGTCGAGTTAACAGAGTTGTTCTTTAAAGACGATATCCAGTATAA 1184
BSNT_00187___ 1185 TCAAGAAGCGAAAGCTGTTCTGGAAGAAGAACAGGTTCCTGAAGTGCTCA 1234
||..|||||.|.|.|.|||.|.||||||||.||||||||.||||||||..
BL03267___glt 1185 TCGTGAAGCAAGAACAGTTTTAGAAGAAGAGCAGGTTCCGGAAGTGCTTC 1234
BSNT_00187___ 1235 GCACATTCGCAGCGAAGCTTGAAGAGCTTGAGGAGTTCACTCCGGATAAC 1284
||..|||.||.|..||||||||..|||||||...|||.||..|.|||.|.
BL03267___glt 1235 GCGTATTTGCCGAAAAGCTTGAGCAGCTTGACTCGTTTACGGCAGATGAG 1284
BSNT_00187___ 1285 ATCAAAGCATCAATCAAAGCAGTGCAGAAAGAAACTGGCCATAAAGGGAA 1334
|||||.|||||.||||||||.||.||.||||||||.||.|||||||||||
BL03267___glt 1285 ATCAAGGCATCCATCAAAGCCGTTCAAAAAGAAACAGGACATAAAGGGAA 1334
BSNT_00187___ 1335 AAAACTGTTTATGCCGATTCGTGTTGCTGTAACAGGGCAAACTCACGGTC 1384
|||.||||||||||||||.||.||.||....|||||.||.||.|||||||
BL03267___glt 1335 AAAGCTGTTTATGCCGATCCGCGTAGCGACGACAGGCCAGACCCACGGTC 1384
BSNT_00187___ 1385 CGGAACTGCCGCAATCAATTGAATTGATCGGTAAAGAGACTGCAATTCAG 1434
|.||||||||.||.||.||||||||..|.||.||||| ||.
BL03267___glt 1385 CTGAACTGCCTCAGTCCATTGAATTATTGGGGAAAGA----------CAC 1424
BSNT_00187___ 1435 CGTTTAAAAA-------ATATC---------TAA 1452
|||||.|||| |||.| |||
BL03267___glt 1425 CGTTTTAAAACGGCTGCATAACATTATTCAATAA 1458
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