Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00186 and BL03266

See Amino acid alignment / Visit BSNT_00186 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence dna-align/BSNT_00186___ispF.1.5803.seq
#    -bsequence dna-align/BL03266___ispF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00186___ispF-BL03266___ispF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00186___ispF-BL03266___ispF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00186___ispF
# 2: BL03266___ispF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity:     356/477 (74.6%)
# Similarity:   356/477 (74.6%)
# Gaps:           0/477 ( 0.0%)
# Score: 1296.0
# 
#
#=======================================

BSNT_00186___      1 ATGTTTAGAATTGGACAAGGATTTGATGTGCATCAATTAGTGGAGGGCCG     50
                     |||||||||||.||.|||||||||||.||.||||||.|||||||.|||.|
BL03266___isp      1 ATGTTTAGAATAGGCCAAGGATTTGACGTCCATCAACTAGTGGAAGGCAG     50

BSNT_00186___     51 TCCTCTCATTATTGGCGGAATTGAAATCCCGTACGAAAAAGGGCTGCTTG    100
                     .||.|||||.||.||.||||||...||.||.|||||||||||.||.||.|
BL03266___isp     51 GCCGCTCATAATCGGGGGAATTACGATTCCTTACGAAAAAGGCCTTCTCG    100

BSNT_00186___    101 GCCATTCTGATGCAGACGTATTGCTGCATACTGTCGCTGACGCCTGCCTG    150
                     |.|||||.||||||||.||..|..||||.||..|.||.||.||.||.||.
BL03266___isp    101 GACATTCAGATGCAGATGTGCTTTTGCACACGATTGCGGATGCATGTCTC    150

BSNT_00186___    151 GGAGCTGTGGGTGAAGGAGACATCGGCAAGCATTTTCCTGACACAGATCC    200
                     ||.||.||.||.||.||.||.|||||.||.||.|||||.||.||.|||||
BL03266___isp    151 GGTGCCGTCGGCGAGGGCGATATCGGAAAACACTTTCCGGATACCGATCC    200

BSNT_00186___    201 CGAGTTCAAGGACGCAGATTCTTTCAAATTACTTCAGCATGTCTGGGGAA    250
                     .||.|||||.||.||.||.||.||||||.|.||||..||.||||||...|
BL03266___isp    201 TGAATTCAAAGATGCCGACTCCTTCAAACTCCTTCGCCACGTCTGGATGA    250

BSNT_00186___    251 TCGTGAAACAGAAGGGGTATGTCCTTGGGAACATTGATTGCACCATCATA    300
                     |||||||..|.||.||.|||...||.||||||.|.|||||.||.|||||.
BL03266___isp    251 TCGTGAAGGAAAAAGGCTATACGCTAGGGAACCTGGATTGTACAATCATC    300

BSNT_00186___    301 GCGCAAAAGCCGAAGATGCTGCCGTACATAGAAGATATGAGAAAAAGAAT    350
                     ||.||||||||.||.|||..||||||.||.|||||.||||||...|||||
BL03266___isp    301 GCCCAAAAGCCTAAAATGGCGCCGTATATCGAAGACATGAGAGCCAGAAT    350

BSNT_00186___    351 TGCTGAAGGCCTTGAGGCAGATGTTTCTCAAGTAAATGTAAAAGCAACAA    400
                     |||.|||||.||.|||||.||..||||.|||.|.||.||||||||.||.|
BL03266___isp    351 TGCCGAAGGGCTAGAGGCGGAAATTTCCCAAATTAACGTAAAAGCGACCA    400

BSNT_00186___    401 CGACAGAAAAGCTTGGATTTACAGGCCGGGCGGAAGGAATAGCGGCTCAG    450
                     |.||.||||||||.||||||||.||..|.||.||||||||.||.||.|||
BL03266___isp    401 CAACCGAAAAGCTCGGATTTACGGGAAGAGCCGAAGGAATCGCCGCCCAG    450

BSNT_00186___    451 GCGACAGTGCTGATACAAAAAGGCTAA    477
                     ||..|.||.|||.|.|||||.|..|||
BL03266___isp    451 GCTTCCGTTCTGCTCCAAAAGGTATAA    477


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