Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00183 and BL03264
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:50
# Commandline: needle
# -asequence dna-align/BSNT_00183___yacL.1.5803.seq
# -bsequence dna-align/BL03264___yacL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00183___yacL-BL03264___yacL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00183___yacL-BL03264___yacL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00183___yacL
# 2: BL03264___yacL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1107
# Identity: 868/1107 (78.4%)
# Similarity: 868/1107 (78.4%)
# Gaps: 24/1107 ( 2.2%)
# Score: 3401.5
#
#
#=======================================
BSNT_00183___ 1 ATGTTAAAACGAATAGTTCAGGCGTTCTTCATTATTTTTGGCGGCGTTGT 50
||||||||||||||||||||.||||||||....|||||.||.||||||.|
BL03264___yac 1 ATGTTAAAACGAATAGTTCAAGCGTTCTTTGCGATTTTGGGAGGCGTTAT 50
BSNT_00183___ 51 TGGTATATTTTTGATACCTGAATTGTTTGTACTGTTAAATATACAGGACA 100
.|||||.|||.|.|||||.|||||||||||||||||||||.|||||||||
BL03264___yac 51 CGGTATTTTTCTCATACCGGAATTGTTTGTACTGTTAAATGTACAGGACA 100
BSNT_00183___ 101 TACCTTTAATAACAAACGCATATACGTCTGCGGCAATAGGAGCAATTATC 150
||||||||.||||||||.|.|||.|||||||.....|||||||.||.|||
BL03264___yac 101 TACCTTTAGTAACAAACCCGTATGCGTCTGCTTGTTTAGGAGCTATCATC 150
BSNT_00183___ 151 TTTTTTCTCATCAGTATATGGGGTACAGAATACGTTGTGAACTGGGTGAA 200
||||||||..|..|.||.|||.||.|.||..||||..|.|||||||||||
BL03264___yac 151 TTTTTTCTTCTGGGCATCTGGTGTGCGGATCACGTCATCAACTGGGTGAA 200
BSNT_00183___ 201 GTGGATAGAGGATTCATTGTTAAAAGCGCCGGTTCCAGATTTGTTATTTG 250
...|||.||||||||.|||.|.|||||.||.||..||||.|||||.||.|
BL03264___yac 201 ACAGATTGAGGATTCCTTGATCAAAGCACCTGTCTCAGACTTGTTGTTCG 250
BSNT_00183___ 251 GAAGTCTT--GGCTTAGTTTTTGGACTTATAATTGCTTATCTTATCGTAA 298
| .|||| ||.|||.|.||.||||||||..|.||||||||||||||.|
BL03264___yac 251 G--CTCTTTGGGATTAATCTTCGGACTTATGCTCGCTTATCTTATCGTCA 298
BSNT_00183___ 299 ATGTTATTCCTTTAGACAATATACCTTACCGCATATTCAGCACAATAATT 348
|.||.|||||.|||.|..|.||.|||||.|...||.|||||||..|.|||
BL03264___yac 299 ACGTCATTCCGTTAAAAGACATCCCTTATCAGTTAATCAGCACGGTCATT 348
BSNT_00183___ 349 CCTGTATTTTTGGC----TTTCTTCCTCGGTTATCTCGGCTTCCAGGTGG 394
||..|..|.||||| ||| |||||.||||||||.||||..||||
BL03264___yac 349 CCGATTGTGTTGGCCGCATTT----CTCGGCTATCTCGGATTCCGTGTGG 394
BSNT_00183___ 395 GCTTTAAGAAAAAGGATGAATTGATCAGCCTGTTTTCCATTTCCGCCAGA 444
|.||.|||||||||||||||.||.|.|..|| ||||.||| |.||
BL03264___yac 395 GTTTCAAGAAAAAGGATGAAATGCTGACACT-TTTTACAT-----CGAG- 437
BSNT_00183___ 445 ATGCAAAAGAAAAAAGGAACAGCTGATGAAGAACATGAGGTTCAAGACAA 494
||||||||||||..|.|||||.|||||.|.|..||...|||||||
BL03264___yac 438 -----AAAGAAAAAAGGTTCTGCTGAGGAAGAGCGTCCGGAAGAAGACAA 482
BSNT_00183___ 495 GAAGCTGAAAATTTTGGACACTAGTGTTATTATTGATGGGAGAATAGCAG 544
.||||||||||||||.|||||.|||||||||||.|||||||||||.||.|
BL03264___yac 483 AAAGCTGAAAATTTTAGACACAAGTGTTATTATAGATGGGAGAATTGCTG 532
BSNT_00183___ 545 ATATTTGTCAGACTGGTTTTTTAGAGGGAGTTATCGTGATTCCGCAGTTT 594
|||||||||||||.||.|||.|.||.||.||.||.||||||||.||||||
BL03264___yac 533 ATATTTGTCAGACCGGATTTCTTGAAGGCGTCATTGTGATTCCTCAGTTT 582
BSNT_00183___ 595 GTCCTTGAGGAATTGCAGCATATTGCAGACTCTTCAGATGTTTTAAAACG 644
||.|||||||||.||||||||||.||.|||||||||||.||..|.|||||
BL03264___yac 583 GTGCTTGAGGAACTGCAGCATATCGCCGACTCTTCAGACGTCCTCAAACG 632
BSNT_00183___ 645 AAACAGAGGACGCCGCGGTCTTGATATCCTGAACCGCATTCAGAAAGAAT 694
|||||||||.||..|.||.||.|||||..|.|||||.||.||||||||..
BL03264___yac 633 AAACAGAGGGCGGAGAGGACTGGATATTTTAAACCGTATCCAGAAAGAGC 682
BSNT_00183___ 695 TAGACATTGAAGTTGAAATTTACGAAGGCGACTTTGAAGATATTCAGGAG 744
|.||.|||.|||||||||||||.||||||||.||||||||.||.||.|||
BL03264___yac 683 TTGATATTAAAGTTGAAATTTATGAAGGCGATTTTGAAGACATCCAAGAG 732
BSNT_00183___ 745 GTTGACAGCAAGCTCGTCAAACTTGCTAAGCTGACATCCGGGGTCGTTGT 794
||.||||||||||||||||||||.||.||||||||.||.||.||.||.||
BL03264___yac 733 GTCGACAGCAAGCTCGTCAAACTGGCGAAGCTGACCTCGGGCGTTGTCGT 782
BSNT_00183___ 795 GACGAATGATTTTAATTTAAATAAAGTGTGCGAGCTTCAGAAGGTAGCAG 844
.||.||.|||||.|||||.||.|||||.||||||||.||.|||||.||.|
BL03264___yac 783 CACAAACGATTTCAATTTGAACAAAGTATGCGAGCTCCAAAAGGTTGCCG 832
BSNT_00183___ 845 TATTAAACATTAATGACCTTGCCAATGCGGTCAAGCCTGTTGTGCTTCCT 894
||||.|||||.||.|||||||||||.||.|||||||||||.||||||||.
BL03264___yac 833 TATTGAACATCAACGACCTTGCCAACGCCGTCAAGCCTGTCGTGCTTCCG 882
BSNT_00183___ 895 GGCGAGGAAATGAATGTTCAGGTCATTAAGGACGGGAAAGAGCATAATCA 944
||.||.||||||||.||.||||||||.||.|||||.|||||.||||||||
BL03264___yac 883 GGAGAAGAAATGAAGGTGCAGGTCATCAAAGACGGAAAAGAACATAATCA 932
BSNT_00183___ 945 GGGAGTTGCCTACTTGGATGACGGTACGATGATTGTCGTTGAAGAAGGAC 994
|||.||.||.||..||||.|||||.|||||||||||||||||||||||.|
BL03264___yac 933 GGGCGTGGCTTATCTGGACGACGGCACGATGATTGTCGTTGAAGAAGGGC 982
BSNT_00183___ 995 GCAATTATATCGGCAAGCATATTGATGTACTCGTCACAAGTGTGCTGCAG 1044
|.||||||||.|||||.|||||.||.||.|||||.||.||.|||||||||
BL03264___yac 983 GAAATTATATTGGCAAACATATCGACGTGCTCGTGACCAGCGTGCTGCAG 1032
BSNT_00183___ 1045 ACAGCAGCGGGACGAATGATTTTTGCGAAGCCTAAGCTGTTGGAGAAGGC 1094
|||||.||.||..|||||||.||.||.|||||.||.|||.||||.|||||
BL03264___yac 1033 ACAGCGGCAGGCAGAATGATATTCGCCAAGCCGAAACTGCTGGAAAAGGC 1082
BSNT_00183___ 1095 GCTGTAA 1101
|||.|.|
BL03264___yac 1083 GCTTTGA 1089
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