Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00176 and BL03260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence dna-align/BSNT_00176___mcsB.1.5803.seq
# -bsequence dna-align/BL03260___mcsB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00176___mcsB-BL03260___mcsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00176___mcsB-BL03260___mcsB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00176___mcsB
# 2: BL03260___mcsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1104
# Identity: 850/1104 (77.0%)
# Similarity: 850/1104 (77.0%)
# Gaps: 24/1104 ( 2.2%)
# Score: 3204.0
#
#
#=======================================
BSNT_00176___ 1 ATGTCGCTAAAGCATTTTATTCAGGACGCACTAAGCAGTTGGATGAAGCA 50
|||||.||..||||||||||||||.|.||..||||||.|||||||..|||
BL03260___mcs 1 ATGTCACTGCAGCATTTTATTCAGAATGCTTTAAGCAATTGGATGCGGCA 50
BSNT_00176___ 51 GAAAGGACCTGAAAGTGACATTGTACTCAGCAGCCGCATACGTTTAGCAA 100
..||||.|||||.||||||||.||.||.||||||||.||.|||.|.||..
BL03260___mcs 51 AGAAGGCCCTGAGAGTGACATCGTGCTTAGCAGCCGGATCCGTCTTGCGC 100
BSNT_00176___ 101 GGAACTTTGAGCATATTCGGTTCCCTACGCGGTATTCCAATGAAGAAGCC 150
|.||.||.||..|..|.||.||.||.||||..|.|||.||||||||.||.
BL03260___mcs 101 GCAATTTGGATAAAGTCCGTTTTCCAACGCTTTTTTCAAATGAAGAGGCT 150
BSNT_00176___ 151 TCATCCATCATACAGCA--ATTTGAAGATCAGTTTTCAGAGC-AAGAAAT 197
|||.|.|| ||.|||| .||||||||.|||||..||| || |.|||.|
BL03260___mcs 151 TCAGCGAT--TATAGCATTGTTTGAAGAACAGTTCACAG-GCTATGAAGT 197
BSNT_00176___ 198 TCCCGGAATCGGCAAATTTG---TTTTGATTAGAATGAATGATGCACAGC 244
.|||||.|||||.||.|||| ||.|| |.||||.||.|.|..||||
BL03260___mcs 198 GCCCGGTATCGGGAAGTTTGAGCTTGTG---AAAATGGATCAGGTCCAGC 244
BSNT_00176___ 245 CTTTAGAGAAGCGTGTACTTGTTGAAAAACATCTAATCAGTCCGAATCTG 294
||||.||.||..|.||.|||||.|||||||||||.|||||||||.||.||
BL03260___mcs 245 CTTTGGAAAAAAGGGTTCTTGTGGAAAAACATCTGATCAGTCCGCATTTG 294
BSNT_00176___ 295 ACAGAGTCTCCTTTTGGCGGCTGTTTGCTTTCTGAAAATGAGGAAGTAAG 344
||.||..||.|.|||||||..||..|.||||||||||||||.|||||.||
BL03260___mcs 295 ACGGAAGCTTCCTTTGGCGCATGCCTTCTTTCTGAAAATGAAGAAGTGAG 344
BSNT_00176___ 345 CGTCATGCTAAATGAAGAGGACCATATTAGAATTCAGTGTCTTTTCCCTG 394
..|.|||||.|||||.||.||.||||||.|.|||||.|||||.||.||.|
BL03260___mcs 345 TATTATGCTGAATGAGGAAGATCATATTCGCATTCAATGTCTATTTCCGG 394
BSNT_00176___ 395 GATTTCAGCTTTTAGAAGCAATGAAAGCCGCAAACCAGGTCGACGACTGG 444
||||||||||.|.|||||||.|||||||.|||||.|||||.|||||.|||
BL03260___mcs 395 GATTTCAGCTGTCAGAAGCATTGAAAGCAGCAAATCAGGTGGACGATTGG 444
BSNT_00176___ 445 ATCGAAGA----AAAAGTTGATTATGCATTCAATGAGCAAAGAGGATACT 490
||.||||| | |.||.||.||.||....||.||||||||.||||
BL03260___mcs 445 ATTGAAGACCGGA----TCGACTACGCTTTTTCCGAACAAAGAGGCTACT 490
BSNT_00176___ 491 TAACCAGCTGTCCTACAAACGTAGGTACAGGTTTAAGGGCTTCGGTCATG 540
|.||||||||.||||||||.||.||.|||||..|.||.|||||.||||||
BL03260___mcs 491 TGACCAGCTGCCCTACAAATGTCGGAACAGGGCTTAGAGCTTCTGTCATG 540
BSNT_00176___ 541 ATGCATCTGCCGGCACTGGTTTTAACTAGGCAAATAAATCGAATTATACC 590
|||||.||.||.||..|.||.|||||||||||||||||..|||||||.||
BL03260___mcs 541 ATGCACCTTCCTGCTTTAGTGTTAACTAGGCAAATAAACAGAATTATTCC 590
BSNT_00176___ 591 GGCAATTAATCAATTA-GGCTTAGTTGTTAGAGGAATTTATGGGGAAGGC 639
|||||||||||||||| ||||| |||||||||||||||||.||.||||||
BL03260___mcs 591 GGCAATTAATCAATTAGGGCTT-GTTGTTAGAGGAATTTACGGTGAAGGC 639
BSNT_00176___ 640 AGCGAAGCAGTAGGGAATATCTTTCAAATTTCAAATCAGATCACGCTTGG 689
|||||||||.||||||||||||||||||||||.||.||.||.||.||.||
BL03260___mcs 640 AGCGAAGCATTAGGGAATATCTTTCAAATTTCCAACCAAATTACCCTCGG 689
BSNT_00176___ 690 TAAGTCAGAGCAGGATATTGTAGAGGATCTTAACAGTGTTGCTGCTCAGT 739
|||.||.||.||.||.|||||.||.|||||.||||||||.|.|||||||.
BL03260___mcs 690 TAAATCGGAACACGACATTGTCGAAGATCTGAACAGTGTCGTTGCTCAGC 739
BSNT_00176___ 740 TGATTGAACAAGAACGATCTGCCCGAGAAGCGATTTATCAAACTTCTAAA 789
||||.||||||||.||.||.||..||.|.|||.|||||||.|||||..||
BL03260___mcs 740 TGATCGAACAAGAGCGTTCAGCAAGAAAGGCGCTTTATCAGACTTCGCAA 789
BSNT_00176___ 790 ATCGAACTTGAGGATCGGGTATATCGGTCTTATGGGGTCTTGTCTAATTG 839
|||||||||||.||.||.||.||..|.|||||.||.||..||||.|||||
BL03260___mcs 790 ATCGAACTTGAAGACCGCGTCTACAGATCTTACGGCGTACTGTCCAATTG 839
BSNT_00176___ 840 CCGGATGATAGAATCGAAAGAAACTGCAAAGTGCCTTTCAGATGTTCGGT 889
|||||||||.||.|||||||||||.||||..||.||||||||.|||||..
BL03260___mcs 840 CCGGATGATCGAGTCGAAAGAAACAGCAAGATGTCTTTCAGACGTTCGTC 889
BSNT_00176___ 890 TAGGCATAGACCTAGGCATTATAAAAGGACTTTCAAGCAACATACTTAAC 939
|.||.||.|||||.||.||.||||||||.|||||.|||||.||||||||.
BL03260___mcs 890 TTGGAATTGACCTGGGGATAATAAAAGGTCTTTCCAGCAATATACTTAAT 939
BSNT_00176___ 940 GAACTTATGATTTTGACGCAGCCAGGATTTTTACAGCAATACTCGGGAGG 989
||.||.|||||..||||.|||||.||||||.|.||||||||.||.|||||
BL03260___mcs 940 GAGCTGATGATCCTGACACAGCCTGGATTTCTCCAGCAATATTCCGGAGG 989
BSNT_00176___ 990 CGCTTTGCGTCCGAACGAAAGGGACATTCGAAGAGCGGCTCTCATCAGAG 1039
.||.||..|.||.|||||.||||||||..|..|.||.|||||.|||||.|
BL03260___mcs 990 AGCCTTAAGGCCAAACGAGAGGGACATCAGGCGGGCTGCTCTTATCAGGG 1039
BSNT_00176___ 1040 AACGGCTT-CACTTAGAAATGAATGGGAAAAGACAGGAGGATGAATCGAT 1088
|.| |||| .|.|||||||..||.||.||.|||||||||||||||.||||
BL03260___mcs 1040 AGC-GCTTGAAATTAGAAAACAACGGCAATAGACAGGAGGATGAAACGAT 1088
BSNT_00176___ 1089 ATGA 1092
||||
BL03260___mcs 1089 ATGA 1092
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