Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01896 and BL03252
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence dna-align/BSNT_01896___comZ.1.5803.seq
# -bsequence dna-align/BL03252___comZ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01896___comZ-BL03252___comZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01896___comZ-BL03252___comZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01896___comZ
# 2: BL03252___comZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity: 131/210 (62.4%)
# Similarity: 131/210 (62.4%)
# Gaps: 42/210 (20.0%)
# Score: 443.5
#
#
#=======================================
BSNT_01896___ 1 ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCT 50
|| |||||||||||||.|.|||||.|||||||||||||||||.||..|
BL03252___com 1 AT---GCACGAAAAATCAATGGAATTTTTGCAAATTGCCATGAAGTACGT 47
BSNT_01896___ 51 CCCTGAAGCGAAAGAACAGCTTGAGAAATCAGGCATTGAGCTCTC----- 95
.||.||||||||||.|.||.|.||||||.|.||.||.||.||.||
BL03252___com 48 TCCGGAAGCGAAAGCAGAGATGGAGAAAGCGGGAATCGAACTTTCCCCGG 97
BSNT_01896___ 96 -AATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCG 144
|||| .|..||||.||.|||||..|.|||||.|..||.|||||.
BL03252___com 98 AAATG------CTTGAGCCATTCATGAACTTGTTTACGAAAGTGATGGCC 141
BSNT_01896___ 145 GAAGCTTATGAGCTTGGCAA------------GTCTGACGCTAAATCTGA 182
||.|||||.|||||.||.|| .||.||||| ||||
BL03252___com 142 GAGGCTTACGAGCTCGGTAAAGCGGAAGCCGGTTCAGACGC-----CTGA 186
BSNT_01896___ 183 AACAGAATAA 192
BL03252___com 186 ---------- 186
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