Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01885 and BL03247
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:24
# Commandline: needle
# -asequence dna-align/BSNT_01885___argF.1.5803.seq
# -bsequence dna-align/BL03247___argF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01885___argF-BL03247___argF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01885___argF-BL03247___argF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01885___argF
# 2: BL03247___argF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1010
# Identity: 683/1010 (67.6%)
# Similarity: 683/1010 (67.6%)
# Gaps: 109/1010 (10.8%)
# Score: 2221.0
#
#
#=======================================
BSNT_01885___ 1 -------ATGCACACA-----GTGAC---GCAAACCAGTTTATACGGAAA 35
.||.|.||| |.||| |.|.|.||.|.|.|..||.||
BL03247___arg 1 ATGTCTACTGTAAACATCGGGGCGACCCGGGAGATCAATCTGTCAGGCAA 50
BSNT_01885___ 36 AGATTTATTAA-CGTTAAAGGACCTTAGTGAAGAGGATATAAACGCC--- 81
.|||||.|||| |.|.||| |||.||....|||||||.|| ||.|
BL03247___arg 51 GGATTTCTTAAGCCTGAAA-GACTTTTCAAAAGAGGAGAT---CGTCTAT 96
BSNT_01885___ 82 TTGCTCGCAGAAGCCGGTGAGC-----TGAAACAAAACAAAATTC-AGCC 125
|||||...|||.|| ||| ||||.|.|||.||||||| ||.|
BL03247___arg 97 TTGCTGAAAGAGGC-----AGCGGCAATGAAGCGAAATAAAATTCAAGAC 141
BSNT_01885___ 126 TATATTCCATGGCAAAACCTTGGCGATGATTTTTGAAAAATCATCAACGC 175
||.||..|.||.|||||.|||||||||||.|||||||||||.||.|||.
BL03247___arg 142 -ATCTTTAAAGGAAAAACATTGGCGATGATCTTTGAAAAATCGTCGACGA 190
BSNT_01885___ 176 GGACACGTGTTTCTTTTGAAGCGGGCATGGCACAGCTTGGCGGGAACGCC 225
|.||.||.||.||.||||||||.||.|||||.|||||.|||||.||||||
BL03247___arg 191 GAACGCGCGTATCGTTTGAAGCCGGAATGGCGCAGCTCGGCGGAAACGCC 240
BSNT_01885___ 226 CTCTTTCTAAGCCAG-AAAGATCTGCAGCTGGGGCGCGGTGAGACTGTCG 274
||.|||.|||| ||| |||||..||||||||||..|.||.||.||..|||
BL03247___arg 241 CTGTTTTTAAG-CAGTAAAGACATGCAGCTGGGCAGAGGGGAAACGATCG 289
BSNT_01885___ 275 CTGATACGGCAAAAGTGCTGTCAGGCTATGTGGATGCCATCATGATCCGG 324
|.|||||.||.||||||||.||..|.||||||||.||.||.||||||||.
BL03247___arg 290 CAGATACCGCGAAAGTGCTTTCGCGATATGTGGACGCGATTATGATCCGC 339
BSNT_01885___ 325 ACCTTTGAACATGAAAAGGTGGAGGAACTTGCCAAAGAAGCTGACATTCC 374
||.||.|||||.|||||.||.||.||.||||||||..|.||.||.|||||
BL03247___arg 340 ACATTCGAACACGAAAAAGTCGAAGAGCTTGCCAAGCACGCCGAGATTCC 389
BSNT_01885___ 375 GGTGATCAATGGACTTACTGATAAATACCACCCATGCCAGGCGCTGGCGG 424
.||||||||.|||.|.||.|||...|..||.||.||.||.|||||....|
BL03247___arg 390 CGTGATCAACGGATTGACCGATCTTTTTCATCCGTGTCAAGCGCTTAGTG 439
BSNT_01885___ 425 ATCTCTTGACGATTAAGGAGATAAAAGGGAAGCTTAAA--GGCGTAAAAG 472
|.||.||.||||||.|.|||||.||| ||||..||||| ||| |.||||
BL03247___arg 440 ACCTATTAACGATTCAAGAGATGAAA-GGAACATTAAAAGGGC-TGAAAG 487
BSNT_01885___ 473 TCTCATACATCGGTGACGGAAATAACGTGGCGCACTCCTTGATGATCGGC 522
.|...||..|.||.||||||||.||.||.|||||.||..||.|.||||||
BL03247___arg 488 CCGTTTATGTTGGCGACGGAAACAATGTCGCGCATTCGCTGTTAATCGGC 537
BSNT_01885___ 523 TGCGCGAAAATGGGCTGTGATATCTCGATCGCTTC-GCCAAAGGGATATG 571
|||||||||.||||.||.||.||..||.|.||||| .|||||||| ||||
BL03247___arg 538 TGCGCGAAAGTGGGATGCGACATTACGGTGGCTTCACCCAAAGGG-TATG 586
BSNT_01885___ 572 AAGTGTTAGATGAAGCA------GCTGAAGC-GGCAAAAACATATGCACT 614
||..|||.|| |.||||.| |||..|.||||..||
BL03247___arg 587 -------AGCCGAATCAGGACGTGGTGAAACTGGCCGAGACATTCGC--- 626
BSNT_01885___ 615 TC----AATCCGGCTCTTCTATCACGCTGACAGATGATCCGATTGAAGCT 660
| |||||||..|..|..|||||.|.|||.|||||||..|...|||.
BL03247___arg 627 -CGAAGAATCCGGTGCGGCCGTCACGATCACAAATGATCCCGTGTCAGCC 675
BSNT_01885___ 661 GTAAAAGACGCGGACGTAATTTATTCTGATGTGTTTACAAGCATGGGGCA 710
||..||.|.|||||.||.||.|||||||||||.||||||||||||||.||
BL03247___arg 676 GTTCAACAAGCGGATGTCATCTATTCTGATGTTTTTACAAGCATGGGACA 725
BSNT_01885___ 711 GGAAGCGGAAGAGCAAGAACGTCTTGCTG----TCTTTGCGCCTTATCAG 756
|||.|.|||||...||||||| |.|| |.|||||.|||||.||.
BL03247___arg 726 GGAGGAGGAAGCCGAAGAACG----GATGAAGATTTTTGCTCCTTACCAA 771
BSNT_01885___ 757 GTGAATGCGG--CGCTTGTCAGCCATGCCAAGCCTGACTATACATTTTTA 804
||.|| ||| ||||||||..|||||||||||||||.||.|..|||.|.
BL03247___arg 772 GTCAA--CGGAACGCTTGTCTCCCATGCCAAGCCTGATTACATCTTTCTG 819
BSNT_01885___ 805 CATTGTCTCCCTGCGCATCGTGAGGAAGAAGTGACTGCGGAGATTATTGA 854
||.||.||.|||||.||.||.||||||||.||.||.||.|||||.|||||
BL03247___arg 820 CACTGCCTTCCTGCCCACCGGGAGGAAGAGGTCACCGCAGAGATCATTGA 869
BSNT_01885___ 855 CGGGCCGAACTCTGCAGTGTTCCAGCAGGCGGAAAACCGTCTTCATGTGC 904
|||.|||||.||.||.||.||.||||||||.||||||||.||.||.||.|
BL03247___arg 870 CGGTCCGAATTCAGCGGTATTTCAGCAGGCTGAAAACCGCCTGCACGTCC 919
BSNT_01885___ 905 AAAAAGCACTGCTGAAGGCCATTTTATACAAAG----GGGAATCATCAAA 950
||||||| |||||..|||| | |.|||..|
BL03247___arg 920 AAAAAGC---------------TTTATTAAAAGCACTG----TTATCTTA 950
BSNT_01885___ 951 AAACTGCTGA 960
|
BL03247___arg 951 A--------- 951
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