Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01883 and BL03245
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_01883___carA.1.5803.seq
# -bsequence dna-align/BL03245___carA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01883___carA-BL03245___carA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01883___carA-BL03245___carA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01883___carA
# 2: BL03245___carA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1108
# Identity: 775/1108 (69.9%)
# Similarity: 775/1108 (69.9%)
# Gaps: 89/1108 ( 8.0%)
# Score: 2598.0
#
#
#=======================================
BSNT_01883___ 1 ATGGAAGGTTATTTAGTGTTAGAAGATGGGACATCGTTCAGCGGCGAGCT 50
||||||||.||||||||..|.||||||||.|||||.||||||||.||.||
BL03245___car 1 ATGGAAGGATATTTAGTTCTTGAAGATGGTACATCCTTCAGCGGAGAACT 50
BSNT_01883___ 51 GGACGGCCATGAAAACTGTACGGGAGAAGCTGTTTTTTTCACAGGAATGA 100
||||||.|.|||...|||.||.||.||||..||.|||||.||.||.||||
BL03245___car 51 GGACGGTCTTGACGGCTGCACCGGTGAAGTCGTCTTTTTTACGGGCATGA 100
BSNT_01883___ 101 CAGGCTACCAGGAAGTGCTGACAGATCCATCGTATAAGGGACAGATTATT 150
|.||.||.|||||.||..||||||||||.||.|||||.||.|||||||||
BL03245___car 101 CCGGTTATCAGGAGGTTTTGACAGATCCTTCATATAAAGGCCAGATTATT 150
BSNT_01883___ 151 GTATTTACCTACCCGCTGATTGGCAACTACGGCATAAATGAAAAGGACTT 200
||.|||||.||.|||||||||||||||||.||.||.||||.||..||...
BL03245___car 151 GTCTTTACGTATCCGCTGATTGGCAACTATGGAATTAATGGAAGCGATGC 200
BSNT_01883___ 201 TGAAAGCAAGAAACCGCAAGTAAAAGCAGCGGTTGTCTATGAGGCGTGTG 250
|||||||||..|.||.||.||.|.||..|..||.||||||||.|||||.|
BL03245___car 201 TGAAAGCAAACAGCCTCAGGTGAGAGGGGTCGTCGTCTATGAAGCGTGCG 250
BSNT_01883___ 251 ATCA-CTTTTCTCATTATGAAGCGGTATACAGCCTCAAGGAGTATTTACA 299
| || .|||||.||..||.|.|||..|.|.|||||...|||.||.||...
BL03245___car 251 A-CAGATTTTCCCACCATCAGGCGACAGAAAGCCTTCGGGAATACTTGGC 299
BSNT_01883___ 300 GAAATGGAACATTCCGCTGTTAACCCATGTTGATACGAGGGCTGTCGTGA 349
|||.|||.|..|||||||.||..|.||.||.||.||.||.||.||.||..
BL03245___car 300 GAAGTGGGATGTTCCGCTTTTGTCGCACGTGGACACAAGAGCGGTTGTTC 349
BSNT_01883___ 350 AGAAAATCCGGGCAAACGGGACGATGGGTGCAACAGTCACAGCCT--CTA 397
||.|.|||.|||||||.||||||.||..||| .||.|| |.|
BL03245___car 350 AGCATATCAGGGCAAAAGGGACGCTGAATGC--------GAGGCTGACGA 391
BSNT_01883___ 398 A--AGAAGGAGCTGAGAT---GGCCCTTCAACCAG-------AGAATGTG 435
| |.||||| .||.|| |||.|..| .|||| |..|||.|
BL03245___car 392 AACAAAAGGA--CGACATCCCGGCTCCGC-GCCAGCTGGAAAACTATGCG 438
BSNT_01883___ 436 GCAGAGCAGGCTTCAGCCC---AGGAAATCAGCACATTCGGCGACGGGAA 482
||| ||||.|||.|..| |.||||.|.||.|.||.||.||.||.||
BL03245___car 439 GCA---CAGGTTTCCGGACAAAACGAAAACGGCGCTTTTGGGGAAGGCAA 485
BSNT_01883___ 483 TAAACATATCGCTCTCATTGATTTTGGCTATAAAAAGTCAATCGCATCAT 532
||..|||||.||.||.||.|||||.||||||||||||||.|||||.||||
BL03245___car 486 TACGCATATTGCGCTGATCGATTTCGGCTATAAAAAGTCGATCGCTTCAT 535
BSNT_01883___ 533 CACTTGTCAAA-AGAGGCTGCAAGGTTACTGTGGTGCCATACCAGCAAAT 581
|.||.| |||| .|.||||||||.||.||.||.||.||.||.||..|.||
BL03245___car 536 CGCTAG-CAAACCGGGGCTGCAAAGTGACGGTCGTTCCCTATCAAGAGAT 584
BSNT_01883___ 582 GGA-GGC----CGTATACAACATCAAACCCGATGGCATTGTGCTATCGAA 626
||| ||| || ||..|.||.||.||.||.||.||.||.||.||
BL03245___car 585 GGACGGCATTGCG-----AAGCTGAATCCGGACGGAATCGTCCTTTCAAA 629
BSNT_01883___ 627 CGGACCTGGAGATCCGAAAGCAATCCAGCCATATTTAGGAAAGATCAAAA 676
|||.||.||.|||||||||||.||||..||||||.|.| |.
BL03245___car 630 CGGGCCGGGCGATCCGAAAGCGATCCTTCCATATATGG----------AT 669
BSNT_01883___ 677 GCA---------------TCATCAGCCGCTTTCCGACTCTCGGCATTTGT 711
||| ||.|| ||.||||||.||||||||.||.
BL03245___car 670 GCACTCCGGGGTATCATTTCTTC-----CTATCCGACGCTCGGCATCTGC 714
BSNT_01883___ 712 CTCGGACATCAGCTGATCGCGCTCGCGTTCGGAGGGAATACTTTTAAGCT 761
|||||.||.|||||||||||||||||.||||||.|..|.||.|.||||||
BL03245___car 715 CTCGGGCACCAGCTGATCGCGCTCGCATTCGGAAGCGACACGTATAAGCT 764
BSNT_01883___ 762 GCCATTCGGACACAGGGGAGCTAATCATCCGGTCATCGACCGTGAGACGA 811
.||.|||||.|||||||||||.||||||||||||||.|||...|||||..
BL03245___car 765 TCCGTTCGGCCACAGGGGAGCCAATCATCCGGTCATGGACAAAGAGACCG 814
BSNT_01883___ 812 AACGGGTCTTTATGACAAGCCAAAACCACAGCTATGTGGTTGAT--GAAC 859
.|||.||.||.||||||||||||||.|||||||||||.||.||| |.||
BL03245___car 815 GACGCGTGTTCATGACAAGCCAAAATCACAGCTATGTCGTCGATCGGGAC 864
BSNT_01883___ 860 AGTCGATTAATGAAGAAGAGCTCACGATCAGATTTCATCATGTCAATGAT 909
| |.||.|..|||.|.||..|..|..||||.||||||||||||||.|
BL03245___car 865 A--CCATCAGCGAAAATGAATTTTCCGTCAGGTTTCATCATGTCAACG-- 910
BSNT_01883___ 910 ACG--TCAGTTGAAGGGCT--TGCCCATAAAAAACTGCCAGTCATGAGTG 955
||| |||||.|||||||| || |||||||.||||||.|||.|....|
BL03245___car 911 ACGGTTCAGTAGAAGGGCTGATG--CATAAAACACTGCCTGTCCTATCCG 958
BSNT_01883___ 956 TGCAATTCCACCCGGAGGCCCATCCCGGACCGGCGGAAAGCGAATGGGTT 1005
|.||.||.||.|||||.||||||||.||||||||.||||||||||||.|.
BL03245___car 959 TTCAGTTTCATCCGGAAGCCCATCCGGGACCGGCTGAAAGCGAATGGATA 1008
BSNT_01883___ 1006 TTTGATGATTATCTAAAGAATGTGATAC-CAGCAAGGAGAGAAATCGCGC 1054
||.|..||.|||.|..||||..||| || .||||||||||||.|||||.|
BL03245___car 1009 TTCGGAGAATATTTGCAGAAATTGA-ACGAAGCAAGGAGAGAGATCGCCC 1057
BSNT_01883___ 1055 ATGCCTAA 1062
||||||||
BL03245___car 1058 ATGCCTAA 1065
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