Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01882 and BL03244
See
Amino acid alignment /
Visit
BSNT_01882 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_01882___argD.1.5803.seq
# -bsequence dna-align/BL03244___argD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01882___argD-BL03244___argD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01882___argD-BL03244___argD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01882___argD
# 2: BL03244___argD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1214
# Identity: 831/1214 (68.5%)
# Similarity: 831/1214 (68.5%)
# Gaps: 112/1214 ( 9.2%)
# Score: 2711.0
#
#
#=======================================
BSNT_01882___ 1 ATGAG-CAGCTTGTTTCAAACCTACGGCCGTTGGGATATTGACCTCAAAA 49
.|||| || |||.||||||||.|||.||||.|||.||||..|..|.||||
BL03244___arg 1 GTGAGTCA-CTTATTTCAAACGTACAGCCGCTGGAATATCAATATTAAAA 49
BSNT_01882___ 50 AAGCAAAGGGAACGTACGTTGAGGATCAAAACGGCAAATCATACCTTGAT 99
||||.||.||.|||..|||..|||||.|.||.||.||..|.||.||.|||
BL03244___arg 50 AAGCGAAAGGCACGATCGTCCAGGATGAGAAGGGGAACGCCTATCTCGAT 99
BSNT_01882___ 100 TTCATTCAGGGGATTGCGGTATCAAATCTAGGACACTGCCATGAAGCGGT 149
|||.|.|||||.||.|||||.|..|||||.||.||.||||..||..|.||
BL03244___arg 100 TTCGTCCAGGGAATCGCGGTCTGCAATCTCGGGCATTGCCCCGATTCAGT 149
BSNT_01882___ 150 GACAGAGGCAGTCAAAAAACAGCTTGACAGCGTATGGCACGTATCTAACC 199
.||.|..||..|||||||||||||||||...||.|||||.||.||.||..
BL03244___arg 150 AACGGCTGCTCTCAAAAAACAGCTTGACGATGTCTGGCATGTTTCCAATT 199
BSNT_01882___ 200 TGTTTCAAAA-CAGTCTCCAAGAGCAAGCGGCGCAGAAGCTGGCAGCGC- 247
|||||||||| .|| ||.|||||..|.|..||.|||...||.|| |
BL03244___arg 200 TGTTTCAAAATGAG-CTTCAAGAAAAGGTTGCACAGCTCCTTGC----CA 244
BSNT_01882___ 248 ---ATAGTGCAGGAGATCTTGTCTTTTTCTGCAACAGCGGCGCAGAGGCG 294
|.||||||||.|||||.|||||.||.|||||||||||.||.||.|||
BL03244___arg 245 AAAACAGTGCAGGCGATCTCGTCTTCTTTTGCAACAGCGGGGCGGAAGCG 294
BSNT_01882___ 295 AATGAAGGTGCGATAAAGCTTGCCCGAAAAGCA-ACTGGAAAAACAAAAA 343
||||||||.|||.|.||||||||.|||||| || ||...|||||||||||
BL03244___arg 295 AATGAAGGGGCGGTGAAGCTTGCGCGAAAA-CATACGAAAAAAACAAAAA 343
BSNT_01882___ 344 TCATCACTTTTCTTCAGTCGTTCCATGGCCGCACGTATGCAGGGATGGCT 393
||.|.||.||||..||.||||||||.||.|||||||||||.||.||||||
BL03244___arg 344 TCGTAACCTTTCAGCAATCGTTCCACGGGCGCACGTATGCGGGAATGGCT 393
BSNT_01882___ 394 GCGACCGGACAGGATAAAATCAAAACA-GGCTTCGGCCCGATGCTTGAAG 442
||.|||||||||||.||.||| ||.|| ||.|||||.|||||||||||||
BL03244___arg 394 GCAACCGGACAGGAAAAGATC-AAGCACGGATTCGGACCGATGCTTGAAG 442
BSNT_01882___ 443 GCTTTCACTACCTGCCATACAATGATCCTTCTGCTTTTAAAGCTCTTG-- 490
|.||.||.|||||.||.|||||.||.|| .|||||..|||
BL03244___arg 443 GATTCCATTACCTCCCTTACAACGAGCC---------GAAAGCATTTGCC 483
BSNT_01882___ 491 -------GGGAGGAAGGCGATATTGCCGCGGTGATGCTTGAAACAGTGCA 533
.|||.|||...|||||.||.|||||.|||||.||..|..|.||
BL03244___arg 484 GAATTGCAGGACGAAAAAGATATCGCGGCGGTCATGCTGGAGCCGATTCA 533
BSNT_01882___ 534 GGGAGAAGGAGGAGTCAATCCGGCGAGTGCTGAATTTTTATCAG-CCGTA 582
.||.|||||.||.||||..||||||||....||||||.| .||| .|||.
BL03244___arg 534 AGGCGAAGGCGGCGTCATCCCGGCGAGCAGAGAATTTCT-GCAGAGCGTT 582
BSNT_01882___ 583 C-AGTCGTTTTGCAAGGAAAAGCAAGCCCTTCTCATCATTGATGAAATCC 631
| ||.| ||||||...||.|||||.||.||.||.||||||||||||.|.|
BL03244___arg 583 CAAGAC-TTTTGCCGAGATAAGCAGGCTCTCCTTATCATTGATGAAGTTC 631
BSNT_01882___ 632 AGACCGGCATCGGACGGACGGGAAAAGGCTTCGCATATGAGCACTTCGGA 681
|.|||||.|||||.||.||.||.||||..||||.||||||.|||...||.
BL03244___arg 632 AAACCGGAATCGGCCGCACCGGTAAAGCATTCGGATATGAACACGAAGGG 681
BSNT_01882___ 682 CTCTCACCGGATATCATCACAGTCGCCAAAGGATTGGGAAACGGCTTTCC 731
||.|||||.||||||.||||.||.||.|||||..||||.|.|||.|||||
BL03244___arg 682 CTGTCACCCGATATCGTCACCGTTGCGAAAGGGCTGGGCAGCGGTTTTCC 731
BSNT_01882___ 732 GGTCGGCGCTGTCATTGGAAAAAAACAGCTTGGAGAAGCGTTTACCCCTG 781
||||||.||.|||||.||.||||||.||||...||||||||||.|.||.|
BL03244___arg 732 GGTCGGAGCGGTCATCGGCAAAAAAGAGCTCTCAGAAGCGTTTTCGCCGG 781
BSNT_01882___ 782 GTTCTCACGGAACGACTTTCGGAGGAAATATGCTGGCGATGGCTGCTGTG 831
|.||.|||||.|||||.||||||||.||.|||||.|||||||||||.|..
BL03244___arg 782 GCTCCCACGGCACGACATTCGGAGGGAACATGCTTGCGATGGCTGCGGCA 831
BSNT_01882___ 832 AATGCCACATTGCAAATTGTATTCCAGCCTGACTTTTTGCAAGAGGCT-- 879
||||||||.|||.|.| ||| ||||||..|||.|||
BL03244___arg 832 AATGCCACGTTGGAGA-------CCA-------TTTTTGACAGAAGCTTT 867
BSNT_01882___ 880 -------------GCTGATAAAGGGGCGTTTTTAAAAGAACAGCTTGAGG 916
|| |..|||||.||.|||||..|..|||||||
BL03244___arg 868 CTTGAAGAAGTGAGC-GCCAAAGGAGCATTTTTGCATCAACAGCT----- 911
BSNT_01882___ 917 CGGAGCTAAAG---AGC--------CCTTTTGTTAAACAAATCCGAGGTA 955
.|||| ||| ||..||||.|||.|.|||||.||.|
BL03244___arg 912 ------GAAAGATAAGCTCCAATTTCCGCTTGTGAAAGATATCCGCGGGA 955
BSNT_01882___ 956 AAGGATTAAT-GCTTGGAATTGAGTGTGATG-GCCCGGTTGCTGACATTA 1003
||||..|.|| || .|||||.|||||..|.| .|||| |||.|.|
BL03244___arg 956 AAGGGCTGATCGC-CGGAATCGAGTGCAAAGAACCCG--TGCAGCC---- 998
BSNT_01882___ 1004 TTGCTGAAT--------TGCAGACATTAGGCTTGCTTGTATTGCCGGCCG 1045
|||| || |.||.|.|..||||.||||.||..|.||.||.|
BL03244___arg 999 --GCTG-ATCGAAGCGCTTCAAAAAGAAGGCCTGCTCGTTCTTCCTGCGG 1045
BSNT_01882___ 1046 GCCCGAACGTGATTCGGCTGCTGCCGCCGCTCACCGTGACTAAGGATGAA 1095
|.||||||||.||..||||.|||||||||.|.||.||..|.||....|||
BL03244___arg 1046 GTCCGAACGTCATCAGGCTTCTGCCGCCGTTGACGGTTGCGAAAAGCGAA 1095
BSNT_01882___ 1096 ATAGCAGAAGCCGT-CAGCAAGCTGAAACAGGCAATCGCTCATCATTCCG 1144
||...||..||||| .|| |||||||||.|.|..||.||..|||||||.|
BL03244___arg 1096 ATCAAAGCGGCCGTGGAG-AAGCTGAAAGATGTCATGGCAAATCATTCTG 1144
BSNT_01882___ 1145 CTGTAAACCAGTGA 1158
|||||||.||||.|
BL03244___arg 1145 CTGTAAAGCAGTAA 1158
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.