Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01879 and BL03241
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_01879___argC.1.5803.seq
# -bsequence dna-align/BL03241___argC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01879___argC-BL03241___argC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01879___argC-BL03241___argC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01879___argC
# 2: BL03241___argC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1090
# Identity: 750/1090 (68.8%)
# Similarity: 750/1090 (68.8%)
# Gaps: 104/1090 ( 9.5%)
# Score: 2412.0
#
#
#=======================================
BSNT_01879___ 1 TTGAAAATAGGAATTGTAGGTGCTACAGGATATGGAGGCACCGAACTTGT 50
|||||||||||.|||.||||||||||.||.||||||||..|.|||.|..|
BL03241___arg 1 TTGAAAATAGGTATTATAGGTGCTACTGGCTATGGAGGGGCAGAAATCAT 50
BSNT_01879___ 51 CAGGATTCTTTCGCATCATCCTCATGCAGAGGAATGCATACTTTATTCAT 100
.||||||.|...|..|||.|||.|||||||.|||||||||.|.|||||||
BL03241___arg 51 GAGGATTATGAGGACTCACCCTTATGCAGATGAATGCATATTGTATTCAT 100
BSNT_01879___ 101 CCAGCGGAGAAGGGAATG---TCTATAGCGAGGGTTATCCTCATCTT--- 144
|.|| .||..||||| | .||||..||..|..||.||.||.|||
BL03241___arg 101 CGAG-TGATGAGGGA--GCCCGCTATGACGCCGCATACCCGCACCTTGTG 147
BSNT_01879___ 145 --ACCGGCTTAGCGGATCAGCAGCTGAAGCCGATTGATATGAATACGAT- 191
|| |..|.|||||.||.|||.|.|||||.||..|.||.|.|||
BL03241___arg 148 AAAC-----TGACAGATCAACACCTGCAACCGATCGAGGTTAAGAGGATT 192
BSNT_01879___ 192 -CAAACACGAAATAGATATCATGTTTCTCGCTGCGCCGCCCGGAGTATCA 240
|.| |.|||||.|||.|..|.|||.|.||.|||||.||.||..||||.
BL03241___arg 193 GCGA--ATGAAATCGATTTTTTATTTATGGCAGCGCCTCCGGGGATATCC 240
BSNT_01879___ 241 AGTGAATTGACTCCAAAGCT---GGCA---GACGCGGGAATTCCGGTTAT 284
||.....||||.|||.||.| .||| ||| ||.||..|.||
BL03241___arg 241 AGCCGGCTGACGCCACAGTTTGATGCATATGAC------ATACCCATCAT 284
BSNT_01879___ 285 TGATCTGTCAGGTGATCTGAGGATACAAGAACC--GGCTGAATATGAAAA 332
|||||||||.||.|||||.||||||| |||||| .|| |..||||||||
BL03241___arg 285 TGATCTGTCCGGCGATCTCAGGATAC-AGAACCCAAGC-GTCTATGAAAA 332
BSNT_01879___ 333 ATGGTATAAACGGACAGCGGCACC-GAAGGCGGTGATTCAAGAGGCGGTA 381
.|||||||||.||..|||.||.|| |||..| |||.|||||.|.||||||
BL03241___arg 333 GTGGTATAAAAGGGAAGCCGCGCCTGAACAC-GTGCTTCAAAAAGCGGTA 381
BSNT_01879___ 382 TACGGTCTGGCAGAACTGAATC---AACTGCAAATTCAACAGGCGAAACT 428
|||||.|||.|.||.||||||| || .|.|||.||..||||.|...
BL03241___arg 382 TACGGACTGTCTGAGCTGAATCGGGAA---GACATTAAAACGGCGCAGTA 428
BSNT_01879___ 429 CATTGCCAATCCAGGCTGTTTTCCAACAGCTGTTTTGCTTGGCCTCGCGC 478
.||.|||||||||||.||||||||.|||||.|||.|.||.|||.|.||||
BL03241___arg 429 TATAGCCAATCCAGGATGTTTTCCGACAGCGGTTCTTCTCGGCTTGGCGC 478
BSNT_01879___ 479 CATTGGCTCAAAAGAAACTGC-TCGATGAATCTTTCGTTATCGTTGACGC 527
|..|.| |||||||...|.|| ||.|.||||||||.||.|||.|.||.||
BL03241___arg 479 CGCTCG-TCAAAAGCGGCAGCATCAACGAATCTTTTGTCATCATCGATGC 527
BSNT_01879___ 528 GAAGACGGGTGTTTCCGGAGCGGGAAGAAAAGCATCCATGGGAACCCATT 577
.||.||.||.||.||.||.||.||.|||||..|.||.|||||.||.||||
BL03241___arg 528 AAAAACAGGGGTATCGGGGGCAGGCAGAAAGCCGTCGATGGGCACTCATT 577
BSNT_01879___ 578 TTTCTGAGCTGAACGGCAATTTTAAAATTTATAAAGTCAATGAACATCAG 627
||||.|||.|.||.|.||||||||||||.||.||.||.||.|||||.|||
BL03241___arg 578 TTTCAGAGGTCAATGACAATTTTAAAATATACAAGGTAAACGAACACCAG 627
BSNT_01879___ 628 CACACGCCGGAAATTGAGCAGGCGCTGAATGAATGGCAGCCAGGCCTCGG 677
||||||||.|||||.||||||.|..|.||..|.|||.| |||.|
BL03241___arg 628 CACACGCCTGAAATCGAGCAGACTGTCAAACAGTGGAA-------CTCCG 670
BSNT_01879___ 678 -------GCCCATTACATTTTCGG--CTCACTTGGTTCCGATGACAAGGG 718
.||.||.||| |||.| |.||.||.|||||.||||||||.|
BL03241___arg 671 CATTTAAACCGATCACA--TTCAGCACGCATTTAGTTCCAATGACAAGAG 718
BSNT_01879___ 719 GCATCATGGCGACGATGTATACCAGA--TTAA------CCTGTGATCTAT 760
||||.||||||||.||.||.| |||| |.|| |.|| |||
BL03241___arg 719 GCATTATGGCGACCATCTACA-CAGAGCTGAAAGACAGCATG-GAT---- 762
BSNT_01879___ 761 CCGCAGATGACCTGCA--TGATTTATATTCGGAATTTTACCAAGATTCAT 808
||.||..|.||||| |.||| |.|||..|||||||..|||||||||
BL03241___arg 763 --GCCGAACAGCTGCAGCTTATT--TTTTCTAAATTTTATAAAGATTCAT 808
BSNT_01879___ 809 ATTTTGTGAGAGTGAGGCCAAAAGGTCAGTACCC-GCAAACGAAAGAAGT 857
|.|||||.||||||||...||..|||..||.||| || .||.|||||.||
BL03241___arg 809 ACTTTGTCAGAGTGAGAGAAACGGGTTCGTTCCCTGC-CACAAAAGAGGT 857
BSNT_01879___ 858 GTACGGCAGCAATTTCTGTGATATCGCCGTGACCCTCGATGAGAGAACGA 907
|||||||||||||||.||.|||||||.|||.|||.|||||||..|.||||
BL03241___arg 858 GTACGGCAGCAATTTTTGCGATATCGGCGTTACCGTCGATGAACGGACGA 907
BSNT_01879___ 908 ACAGAGTCACGATCGTCTCGGTAATCGATAATTTAATGAAGGGTGCCGCC 957
|||||||.||.|||||.||.||.||||||||.||.||||||||.|||||.
BL03241___arg 908 ACAGAGTGACAATCGTGTCAGTGATCGATAACTTGATGAAGGGAGCCGCG 957
BSNT_01879___ 958 GGTCAGGCAGTGCAAAACTTTAATTTGATGAATGGCTGGAATGA-AGAAA 1006
|||||.||.||.||||||||.||..|.|||||.|||| ||| .||||
BL03241___arg 958 GGTCAAGCGGTTCAAAACTTCAACATTATGAACGGCT----TGAGCGAAA 1003
BSNT_01879___ 1007 --------CTGGACTCACCATCACGCCAATTTATCCATAG 1038
||.||.| |.|||||||||||||||||.
BL03241___arg 1004 CCGCCGGGCTTGAAT-----TTACGCCAATTTATCCATAA 1038
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