Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02798 and BL03237
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:34
# Commandline: needle
# -asequence dna-align/BSNT_02798___spoVK.1.5803.seq
# -bsequence dna-align/BL03237___spoVK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02798___spoVK-BL03237___spoVK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02798___spoVK-BL03237___spoVK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02798___spoVK
# 2: BL03237___spoVK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 974
# Identity: 752/974 (77.2%)
# Similarity: 752/974 (77.2%)
# Gaps: 16/974 ( 1.6%)
# Score: 2892.5
#
#
#=======================================
BSNT_02798___ 1 ---TTGGAGCGCGCTGTGACTTATAAAAACAACGGACAGATCAACATTAT 47
|||||..|.|||||.||||||||||||||||||||.|||||.||.||
BL03237___spo 1 GTGTTGGAAAGGGCTGTTACTTATAAAAACAACGGACAAATCAATATCAT 50
BSNT_02798___ 48 TCTGAACGGGCAAAAGCAGGTGCTGACGAATGCTGAGGCAGAAGCGGAAT 97
..|||||||.|||||||||||..||.|.|||.|.|||||.|||||.||||
BL03237___spo 51 ATTGAACGGTCAAAAGCAGGTTTTGGCCAATTCAGAGGCTGAAGCCGAAT 100
BSNT_02798___ 98 ATCAGGCTGCATTGCAAAAAAACGAAGCAAAGCACGGCATTTTGAAGGAA 147
|||||||.|||.||||||||||.|||||.||.|||.|||||.||||.|||
BL03237___spo 101 ATCAGGCCGCACTGCAAAAAAATGAAGCCAAACACAGCATTCTGAAAGAA 150
BSNT_02798___ 148 ATCGAAAAAGAAATGAGCGCATTAGTTGGGATGGAGGAAATGAAACGCAA 197
||.||||..|||||||.|.|..|.||.||.||||||||||||||.|||||
BL03237___spo 151 ATTGAAAGGGAAATGAACACGCTGGTCGGAATGGAGGAAATGAAGCGCAA 200
BSNT_02798___ 198 CATCAAGGAAATATACGCTTGGATTTTTGTGAACCAAAAACGCGCGGAGC 247
.|||||||||||.|||||.||||||||.||.||..||||.||||..||.|
BL03237___spo 201 TATCAAGGAAATCTACGCCTGGATTTTCGTTAATAAAAAGCGCGAAGAAC 250
BSNT_02798___ 248 AAGGCTTGAAGGTTGGAAAGCAAGCGCTGCACATGATGTTTAAAGGAAAT 297
|||||.|.||||..|||||.||.|||||.|||||||||||.|||||||||
BL03237___spo 251 AAGGCCTTAAGGCCGGAAAACAGGCGCTTCACATGATGTTCAAAGGAAAT 300
BSNT_02798___ 298 CCGGGAACGGGAAAAACGACGGTTGCACGGCTCATCGGCAAGCTGTTCTT 347
||||||||.|||||||||||.||.||..||||.|||||||.|||.||.|.
BL03237___spo 301 CCGGGAACCGGAAAAACGACCGTCGCCAGGCTGATCGGCAGGCTTTTTTA 350
BSNT_02798___ 348 TGAAATGAATGTCCTGTCAAAAGGCCACTTAATAGAAGCGGAGCGGGCTG 397
.|||||||||||.||.|||||||||||..|.||.||.||||||||.||.|
BL03237___spo 351 CGAAATGAATGTTCTCTCAAAAGGCCATCTGATCGAGGCGGAGCGCGCCG 400
BSNT_02798___ 398 ACCTGGTCGGGGAGTATATCGGACATACCGCCCAAAAGACGAGAGATTTA 447
|.||.|||||.|||||.|||||.|||||.||.|||||.|||||.||||||
BL03237___spo 401 ATCTCGTCGGTGAGTACATCGGCCATACGGCGCAAAAAACGAGGGATTTA 450
BSNT_02798___ 448 ATCAAAAAGTCATTAGGTGGCATTTTGTTTATAGACGAAGCCTACTCGCT 497
||||||||..|..|.||.||.||..||||.||.||.||||||||.||.||
BL03237___spo 451 ATCAAAAAAGCGATGGGCGGAATCCTGTTCATCGATGAAGCCTATTCCCT 500
BSNT_02798___ 498 GGCAAGAGGCGGCGAAAAGGACTTTGGGAAAGAAGCGATCGACACACTTG 547
.||.||||||||.||.||.|||||.||.||.||.||.|||||.|||.|.|
BL03237___spo 501 TGCCAGAGGCGGAGAGAAAGACTTCGGCAAGGAGGCAATCGATACATTGG 550
BSNT_02798___ 548 TAAAGCATATGGAAGACAAACAGC-ATGAGTTTATTTTGATACTCGCCGG 596
|.||.||||||||.||.||.| || |.||.||.|||||.||.||||||||
BL03237___spo 551 TCAAACATATGGAGGATAAGC-GCAACGAATTCATTTTAATCCTCGCCGG 599
BSNT_02798___ 597 ATATTCACGGGAAATGGATCATTTTCTCTCGTTAAATCCCGGACTCCAAT 646
||||||.||||||||||||||||||||.||.|||||.||.||.||.||.|
BL03237___spo 600 ATATTCGCGGGAAATGGATCATTTTCTTTCATTAAACCCGGGCCTTCAGT 649
BSNT_02798___ 647 CAAGATTTCCCATCTCCATTGATTTTCCGGATTACTCTGTGACCCAGCTC 696
||||.|||||.|||..|||.||||||||.||||||||.||.|.||||||.
BL03237___spo 650 CAAGGTTTCCGATCAGCATCGATTTTCCCGATTACTCAGTCAGCCAGCTG 699
BSNT_02798___ 697 ATGGAGATTGCGAAACGAATGATCGATGAAAGGGAATACCAGCTCAGTCA 746
|||||.|||||.|||||.|||||.|..|||||||||||.|||.||||.|.
BL03237___spo 700 ATGGACATTGCAAAACGGATGATGGCGGAAAGGGAATATCAGTTCAGCCC 749
BSNT_02798___ 747 AGAAGCTGAATGGAAATTGAAAGATTACTTAATGACAGTGAAAAGCACGA 796
.||.|||||||||||..|||||||..|..|.|||.|.||.|||||.|||.
BL03237___spo 750 TGAGGCTGAATGGAAGCTGAAAGACCATCTGATGGCCGTCAAAAGTACGG 799
BSNT_02798___ 797 CAAGTCCCATTAAATTCAGCAATGGACGTTTTGTCAGAAATGTGATCGAA 846
..||.|||...||.|||||||||||.|||||.|||.|.||..||||||||
BL03237___spo 800 TCAGCCCCGCGAAGTTCAGCAATGGCCGTTTCGTCCGCAACCTGATCGAA 849
BSNT_02798___ 847 AAATCGATCAGAGCACAAGCCATGAGGCTTTTAATGGGAGACCAATACTT 896
|||||.|||.|..|.||.||.|||||.||..|.|||||||||...|||||
BL03237___spo 850 AAATCCATCCGGTCGCAGGCGATGAGACTGCTGATGGGAGACTGCTACTT 899
BSNT_02798___ 897 AAAAAGCGACTTGATGACCATCAAAAGCCAAGATCTTTCCATTAAAGAAG 946
|||.|..||||||||.||||||||||||||.|||||...|.|.||.||||
BL03237___spo 900 AAAGAATGACTTGATAACCATCAAAAGCCAGGATCTCGACTTGAAGGAAG 949
BSNT_02798___ 947 AAGCATCTGGATCTGCA--TAG-- 966
|.|| .|.||| ||.
BL03237___spo 950 ACGC-------GCCGCACGTATAA 966
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