Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02802 and BL03233
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:34
# Commandline: needle
# -asequence dna-align/BSNT_02802___glnA.1.5803.seq
# -bsequence dna-align/BL03233___glnA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02802___glnA-BL03233___glnA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02802___glnA-BL03233___glnA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02802___glnA
# 2: BL03233___glnA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1338
# Identity: 1149/1338 (85.9%)
# Similarity: 1149/1338 (85.9%)
# Gaps: 6/1338 ( 0.4%)
# Score: 4972.0
#
#
#=======================================
BSNT_02802___ 1 ATGGCAAATTACACTAGAGAAGATATCG--AAACATTAGTAAAAGAAGAA 48
||||||||.||.||.|||||.||.||.| |||| |||||||.||.||.
BL03233___gln 1 ATGGCAAAGTATACAAGAGACGACATTGTTAAAC--TAGTAAATGAGGAG 48
BSNT_02802___ 49 AACGTGAAGTATATCCGCCTTCAATTTACTGACATTCTTGGAACAATCAA 98
||.||.||.|||||.||||||||.|||||.||||||||||||||.||.||
BL03233___gln 49 AATGTAAAATATATTCGCCTTCAGTTTACAGACATTCTTGGAACGATTAA 98
BSNT_02802___ 99 GAATGTTGAGATTCCTGTAAGCCAGCTTGGAAAAGCGCTTGATAATAAAG 148
.||.|||||.||||||||.||||||||.|.||||||.|||||||||||||
BL03233___gln 99 AAACGTTGAAATTCCTGTGAGCCAGCTGGAAAAAGCACTTGATAATAAAG 148
BSNT_02802___ 149 TCATGTTTGACGGTTCTTCTATTGAGGGATTCGTTCGTATCGAAGAGTCA 198
|||||||.|||||.|||||.||.|||||||||||.||.||.|||||.||.
BL03233___gln 149 TCATGTTCGACGGCTCTTCAATCGAGGGATTCGTCCGCATTGAAGAATCC 198
BSNT_02802___ 199 GACATGTACCTGTATCCAGATCTAAATACATTTGTTATCTTCCCATGGAC 248
||.||||||.|.||.||.||..||.||||||||||.||.|||||||||||
BL03233___gln 199 GATATGTACTTATACCCTGACTTAGATACATTTGTGATTTTCCCATGGAC 248
BSNT_02802___ 249 AGCTGAAAAAGGTAAAGTAGCACGTTTCATCTGTGATATTTATAATCCGG 298
.||.|||||||||||||||||.||.||||||||.||||||||||||||||
BL03233___gln 249 CGCCGAAAAAGGTAAAGTAGCCCGCTTCATCTGCGATATTTATAATCCGG 298
BSNT_02802___ 299 ATGGCACACCTTTCGAAGGTGACCCGCGAAACAACTTAAAACGGATTCTG 348
|.|||||.||.||.||||||||.|||||.||||||||||||||.|||.||
BL03233___gln 299 ACGGCACGCCGTTTGAAGGTGATCCGCGCAACAACTTAAAACGCATTTTG 348
BSNT_02802___ 349 AAAGAAATGGAAGACCTCGGCTTCAGTGATTTTAACCTTGGACCTGAGCC 398
|||||||||||||||.|.||||||...|||||.||.||||||||.|||||
BL03233___gln 349 AAAGAAATGGAAGACATGGGCTTCTCAGATTTCAATCTTGGACCAGAGCC 398
BSNT_02802___ 399 TGAATTCTTCTTATTCAAATTGGACGAAAAAGGCGAGCCAACGCTTGAAC 448
.|||||||||.|.|||||..|.|||||||||||||||||.||||||||||
BL03233___gln 399 GGAATTCTTCCTGTTCAAGCTAGACGAAAAAGGCGAGCCTACGCTTGAAC 448
BSNT_02802___ 449 TAAACGACAAAGGCGGATATTTCGACTTAGCGCCAACTGATTTAGGAGAA 498
|.||||||||||||||||||||||||.|.|||||.||||||.|.||.|||
BL03233___gln 449 TGAACGACAAAGGCGGATATTTCGACCTTGCGCCGACTGATCTTGGCGAA 498
BSNT_02802___ 499 AACTGCCGCCGCGATATCGTGCTTGAGCTTGAAGAGATGGGCTTTGAAAT 548
||||||||||||||.|||||.||||||||.|||||.||||||||||||||
BL03233___gln 499 AACTGCCGCCGCGACATCGTACTTGAGCTCGAAGAAATGGGCTTTGAAAT 548
BSNT_02802___ 549 CGAAGCGTCTCACCACGAAGTAGCACCTGGTCAACACGAAATCGACTTTA 598
|||||||||||||||||||||.||||||||.||.||||||||||||||.|
BL03233___gln 549 CGAAGCGTCTCACCACGAAGTTGCACCTGGACAGCACGAAATCGACTTCA 598
BSNT_02802___ 599 AATATGCTGGAGCAGTCCGCTCTTGTGATGACATCCAAACTTTTAAACTA 648
||||.||.|||||..|||||.||||.||||||||||||||.||.||.||.
BL03233___gln 599 AATACGCCGGAGCCATCCGCGCTTGCGATGACATCCAAACGTTCAAGCTC 648
BSNT_02802___ 649 GTTGTCAAAACAATTGCCCGCAAACACGGCCTGCATGCGACATTTATGCC 698
|||||.||||||||.||.|||||||||||||||||.||.|||||.|||||
BL03233___gln 649 GTTGTTAAAACAATCGCGCGCAAACACGGCCTGCACGCAACATTCATGCC 698
BSNT_02802___ 699 AAAACCATTGTTCGGTGTGAACGGTTCAGGTATGCACTGCAATCTATCAC 748
||||||.||||||||.||.|||||.|||||.|||||||||||||||||||
BL03233___gln 699 AAAACCGTTGTTCGGCGTAAACGGATCAGGCATGCACTGCAATCTATCAC 748
BSNT_02802___ 749 TCTTCAAAAATGGTGTTAACGCATTCTTTGACGAAAACGCAGATCTTCAG 798
|||||..|||.||.|..|||||.|||||||||.||.||||.|||||||||
BL03233___gln 749 TCTTCCGAAACGGCGCCAACGCCTTCTTTGACAAAGACGCCGATCTTCAG 798
BSNT_02802___ 799 TTAAGTGAAACAGCGAAACACTTCATTGCAGGTATCGTGAAGCACGCAAC 848
.|.||||||||.||.||.||.|||||.||.||.|||||.|||||||||||
BL03233___gln 799 CTGAGTGAAACGGCAAAGCAATTCATCGCCGGCATCGTCAAGCACGCAAC 848
BSNT_02802___ 849 AAGCTTTACAGCAGTAACAAACCCGACAGTAAACTCTTACAAACGTCTTG 898
||||||||||||.||.|||||||||||.||.|||||||||||.||.||||
BL03233___gln 849 AAGCTTTACAGCTGTGACAAACCCGACTGTCAACTCTTACAAGCGCCTTG 898
BSNT_02802___ 899 TTCCTGGCTATGAAGCACCTTGCTATGTAGCATGGAGCGCGCAAAACAGA 948
||||.|||||||||||||||||||||||.|||||||||||||||||||||
BL03233___gln 899 TTCCAGGCTATGAAGCACCTTGCTATGTGGCATGGAGCGCGCAAAACAGA 948
BSNT_02802___ 949 AGCCCGCTTATCCGTATCCCGGCTTCTCGCGGCATCAGCACACGTGTTGA 998
||||||.|.|||||.|||||||||||.||||||||||||||.||.||.||
BL03233___gln 949 AGCCCGTTAATCCGCATCCCGGCTTCCCGCGGCATCAGCACGCGCGTAGA 998
BSNT_02802___ 999 AGTACGCAGCGTAGACCCAGCTGCAAACCCATACCTTGCACTT-AGCGTA 1047
|||..|.|||||||||||..||||.|||||.|||||||| ||| ||||||
BL03233___gln 999 AGTCAGAAGCGTAGACCCTTCTGCGAACCCGTACCTTGC-CTTGAGCGTA 1047
BSNT_02802___ 1048 TTGCTTGCTGCAGGTTTAGACGGTATCAAAAACAAACTGGAAGCGCCGGC 1097
.|.|||||.|||||..|.|||||.|||||||||||.||||||||.|||||
BL03233___gln 1048 CTTCTTGCAGCAGGACTTGACGGCATCAAAAACAAGCTGGAAGCACCGGC 1097
BSNT_02802___ 1098 TCCAATCGACCGCAACATCTATGTGATGAGCAAAGAAGAGCGCATGGAAA 1147
|||.||||||||||||||||||||.||||..||||||||||||.|.||||
BL03233___gln 1098 TCCGATCGACCGCAACATCTATGTCATGACAAAAGAAGAGCGCCTCGAAA 1147
BSNT_02802___ 1148 ACGGAATCGTTGACCTTCCAGCAACACTTGCGGAAGCACTAGAAGAATTC 1197
||||||||||.||||||||.||.|||||.||.||.||.||.|||||||||
BL03233___gln 1148 ACGGAATCGTCGACCTTCCTGCGACACTCGCAGACGCTCTCGAAGAATTC 1197
BSNT_02802___ 1198 AAATCAAACGAAGTCATGGTCAAAGCGCTGGGCGAGCACCTATTCGAACA 1247
||||||||||||||||||||||||||.||.|||||.||.|||||||||||
BL03233___gln 1198 AAATCAAACGAAGTCATGGTCAAAGCCCTCGGCGACCATCTATTCGAACA 1247
BSNT_02802___ 1248 CTTCATCGAAGCAAAAGAAATCGAATGGGATATGTTCCGCACGCAAGTTC 1297
||||.|||||||||||||||||||||||||||||||||||||.|||||.|
BL03233___gln 1248 CTTCGTCGAAGCAAAAGAAATCGAATGGGATATGTTCCGCACACAAGTCC 1297
BSNT_02802___ 1298 ACCCTTGGGAACACGAACAGTATATGTCTCAGTATTAA 1335
|.||||||||.|.|||.|||||||||||||||||||||
BL03233___gln 1298 ATCCTTGGGAGCGCGAGCAGTATATGTCTCAGTATTAA 1335
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