Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02802 and BL03233

See Amino acid alignment / Visit BSNT_02802 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:34
# Commandline: needle
#    -asequence dna-align/BSNT_02802___glnA.1.5803.seq
#    -bsequence dna-align/BL03233___glnA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02802___glnA-BL03233___glnA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02802___glnA-BL03233___glnA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02802___glnA
# 2: BL03233___glnA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1338
# Identity:    1149/1338 (85.9%)
# Similarity:  1149/1338 (85.9%)
# Gaps:           6/1338 ( 0.4%)
# Score: 4972.0
# 
#
#=======================================

BSNT_02802___      1 ATGGCAAATTACACTAGAGAAGATATCG--AAACATTAGTAAAAGAAGAA     48
                     ||||||||.||.||.|||||.||.||.|  ||||  |||||||.||.||.
BL03233___gln      1 ATGGCAAAGTATACAAGAGACGACATTGTTAAAC--TAGTAAATGAGGAG     48

BSNT_02802___     49 AACGTGAAGTATATCCGCCTTCAATTTACTGACATTCTTGGAACAATCAA     98
                     ||.||.||.|||||.||||||||.|||||.||||||||||||||.||.||
BL03233___gln     49 AATGTAAAATATATTCGCCTTCAGTTTACAGACATTCTTGGAACGATTAA     98

BSNT_02802___     99 GAATGTTGAGATTCCTGTAAGCCAGCTTGGAAAAGCGCTTGATAATAAAG    148
                     .||.|||||.||||||||.||||||||.|.||||||.|||||||||||||
BL03233___gln     99 AAACGTTGAAATTCCTGTGAGCCAGCTGGAAAAAGCACTTGATAATAAAG    148

BSNT_02802___    149 TCATGTTTGACGGTTCTTCTATTGAGGGATTCGTTCGTATCGAAGAGTCA    198
                     |||||||.|||||.|||||.||.|||||||||||.||.||.|||||.||.
BL03233___gln    149 TCATGTTCGACGGCTCTTCAATCGAGGGATTCGTCCGCATTGAAGAATCC    198

BSNT_02802___    199 GACATGTACCTGTATCCAGATCTAAATACATTTGTTATCTTCCCATGGAC    248
                     ||.||||||.|.||.||.||..||.||||||||||.||.|||||||||||
BL03233___gln    199 GATATGTACTTATACCCTGACTTAGATACATTTGTGATTTTCCCATGGAC    248

BSNT_02802___    249 AGCTGAAAAAGGTAAAGTAGCACGTTTCATCTGTGATATTTATAATCCGG    298
                     .||.|||||||||||||||||.||.||||||||.||||||||||||||||
BL03233___gln    249 CGCCGAAAAAGGTAAAGTAGCCCGCTTCATCTGCGATATTTATAATCCGG    298

BSNT_02802___    299 ATGGCACACCTTTCGAAGGTGACCCGCGAAACAACTTAAAACGGATTCTG    348
                     |.|||||.||.||.||||||||.|||||.||||||||||||||.|||.||
BL03233___gln    299 ACGGCACGCCGTTTGAAGGTGATCCGCGCAACAACTTAAAACGCATTTTG    348

BSNT_02802___    349 AAAGAAATGGAAGACCTCGGCTTCAGTGATTTTAACCTTGGACCTGAGCC    398
                     |||||||||||||||.|.||||||...|||||.||.||||||||.|||||
BL03233___gln    349 AAAGAAATGGAAGACATGGGCTTCTCAGATTTCAATCTTGGACCAGAGCC    398

BSNT_02802___    399 TGAATTCTTCTTATTCAAATTGGACGAAAAAGGCGAGCCAACGCTTGAAC    448
                     .|||||||||.|.|||||..|.|||||||||||||||||.||||||||||
BL03233___gln    399 GGAATTCTTCCTGTTCAAGCTAGACGAAAAAGGCGAGCCTACGCTTGAAC    448

BSNT_02802___    449 TAAACGACAAAGGCGGATATTTCGACTTAGCGCCAACTGATTTAGGAGAA    498
                     |.||||||||||||||||||||||||.|.|||||.||||||.|.||.|||
BL03233___gln    449 TGAACGACAAAGGCGGATATTTCGACCTTGCGCCGACTGATCTTGGCGAA    498

BSNT_02802___    499 AACTGCCGCCGCGATATCGTGCTTGAGCTTGAAGAGATGGGCTTTGAAAT    548
                     ||||||||||||||.|||||.||||||||.|||||.||||||||||||||
BL03233___gln    499 AACTGCCGCCGCGACATCGTACTTGAGCTCGAAGAAATGGGCTTTGAAAT    548

BSNT_02802___    549 CGAAGCGTCTCACCACGAAGTAGCACCTGGTCAACACGAAATCGACTTTA    598
                     |||||||||||||||||||||.||||||||.||.||||||||||||||.|
BL03233___gln    549 CGAAGCGTCTCACCACGAAGTTGCACCTGGACAGCACGAAATCGACTTCA    598

BSNT_02802___    599 AATATGCTGGAGCAGTCCGCTCTTGTGATGACATCCAAACTTTTAAACTA    648
                     ||||.||.|||||..|||||.||||.||||||||||||||.||.||.||.
BL03233___gln    599 AATACGCCGGAGCCATCCGCGCTTGCGATGACATCCAAACGTTCAAGCTC    648

BSNT_02802___    649 GTTGTCAAAACAATTGCCCGCAAACACGGCCTGCATGCGACATTTATGCC    698
                     |||||.||||||||.||.|||||||||||||||||.||.|||||.|||||
BL03233___gln    649 GTTGTTAAAACAATCGCGCGCAAACACGGCCTGCACGCAACATTCATGCC    698

BSNT_02802___    699 AAAACCATTGTTCGGTGTGAACGGTTCAGGTATGCACTGCAATCTATCAC    748
                     ||||||.||||||||.||.|||||.|||||.|||||||||||||||||||
BL03233___gln    699 AAAACCGTTGTTCGGCGTAAACGGATCAGGCATGCACTGCAATCTATCAC    748

BSNT_02802___    749 TCTTCAAAAATGGTGTTAACGCATTCTTTGACGAAAACGCAGATCTTCAG    798
                     |||||..|||.||.|..|||||.|||||||||.||.||||.|||||||||
BL03233___gln    749 TCTTCCGAAACGGCGCCAACGCCTTCTTTGACAAAGACGCCGATCTTCAG    798

BSNT_02802___    799 TTAAGTGAAACAGCGAAACACTTCATTGCAGGTATCGTGAAGCACGCAAC    848
                     .|.||||||||.||.||.||.|||||.||.||.|||||.|||||||||||
BL03233___gln    799 CTGAGTGAAACGGCAAAGCAATTCATCGCCGGCATCGTCAAGCACGCAAC    848

BSNT_02802___    849 AAGCTTTACAGCAGTAACAAACCCGACAGTAAACTCTTACAAACGTCTTG    898
                     ||||||||||||.||.|||||||||||.||.|||||||||||.||.||||
BL03233___gln    849 AAGCTTTACAGCTGTGACAAACCCGACTGTCAACTCTTACAAGCGCCTTG    898

BSNT_02802___    899 TTCCTGGCTATGAAGCACCTTGCTATGTAGCATGGAGCGCGCAAAACAGA    948
                     ||||.|||||||||||||||||||||||.|||||||||||||||||||||
BL03233___gln    899 TTCCAGGCTATGAAGCACCTTGCTATGTGGCATGGAGCGCGCAAAACAGA    948

BSNT_02802___    949 AGCCCGCTTATCCGTATCCCGGCTTCTCGCGGCATCAGCACACGTGTTGA    998
                     ||||||.|.|||||.|||||||||||.||||||||||||||.||.||.||
BL03233___gln    949 AGCCCGTTAATCCGCATCCCGGCTTCCCGCGGCATCAGCACGCGCGTAGA    998

BSNT_02802___    999 AGTACGCAGCGTAGACCCAGCTGCAAACCCATACCTTGCACTT-AGCGTA   1047
                     |||..|.|||||||||||..||||.|||||.|||||||| ||| ||||||
BL03233___gln    999 AGTCAGAAGCGTAGACCCTTCTGCGAACCCGTACCTTGC-CTTGAGCGTA   1047

BSNT_02802___   1048 TTGCTTGCTGCAGGTTTAGACGGTATCAAAAACAAACTGGAAGCGCCGGC   1097
                     .|.|||||.|||||..|.|||||.|||||||||||.||||||||.|||||
BL03233___gln   1048 CTTCTTGCAGCAGGACTTGACGGCATCAAAAACAAGCTGGAAGCACCGGC   1097

BSNT_02802___   1098 TCCAATCGACCGCAACATCTATGTGATGAGCAAAGAAGAGCGCATGGAAA   1147
                     |||.||||||||||||||||||||.||||..||||||||||||.|.||||
BL03233___gln   1098 TCCGATCGACCGCAACATCTATGTCATGACAAAAGAAGAGCGCCTCGAAA   1147

BSNT_02802___   1148 ACGGAATCGTTGACCTTCCAGCAACACTTGCGGAAGCACTAGAAGAATTC   1197
                     ||||||||||.||||||||.||.|||||.||.||.||.||.|||||||||
BL03233___gln   1148 ACGGAATCGTCGACCTTCCTGCGACACTCGCAGACGCTCTCGAAGAATTC   1197

BSNT_02802___   1198 AAATCAAACGAAGTCATGGTCAAAGCGCTGGGCGAGCACCTATTCGAACA   1247
                     ||||||||||||||||||||||||||.||.|||||.||.|||||||||||
BL03233___gln   1198 AAATCAAACGAAGTCATGGTCAAAGCCCTCGGCGACCATCTATTCGAACA   1247

BSNT_02802___   1248 CTTCATCGAAGCAAAAGAAATCGAATGGGATATGTTCCGCACGCAAGTTC   1297
                     ||||.|||||||||||||||||||||||||||||||||||||.|||||.|
BL03233___gln   1248 CTTCGTCGAAGCAAAAGAAATCGAATGGGATATGTTCCGCACACAAGTCC   1297

BSNT_02802___   1298 ACCCTTGGGAACACGAACAGTATATGTCTCAGTATTAA   1335
                     |.||||||||.|.|||.|||||||||||||||||||||
BL03233___gln   1298 ATCCTTGGGAGCGCGAGCAGTATATGTCTCAGTATTAA   1335


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.