Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05208 and BL03219
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:20
# Commandline: needle
# -asequence dna-align/BSNT_05208___yvdT.1.5803.seq
# -bsequence dna-align/BL03219___yvdT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05208___yvdT-BL03219___yvdT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05208___yvdT-BL03219___yvdT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05208___yvdT
# 2: BL03219___yvdT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 608
# Identity: 434/608 (71.4%)
# Similarity: 434/608 (71.4%)
# Gaps: 46/608 ( 7.6%)
# Score: 1521.0
#
#
#=======================================
BSNT_05208___ 1 ATGCCAAAACAAACATCGGGCAAATATGAAAAAATTCTGCAGGCTGCCAT 50
|||.||||.|||||.||.||.|||||||||||.|||.|||||||.|||||
BL03219___yvd 1 ATGTCAAAGCAAACGTCCGGGAAATATGAAAAGATTTTGCAGGCGGCCAT 50
BSNT_05208___ 51 AGAAGTGATTTCTGAAAAAGGCCTCGACAAAGCTTCTATTTCTGATATTG 100
.|||||.||||||||||||||.||.||.||.||.||.|||||.|||||.|
BL03219___yvd 51 TGAAGTCATTTCTGAAAAAGGGCTTGATAAGGCGTCGATTTCAGATATCG 100
BSNT_05208___ 101 TCAAAAAGGCCGGCACTGCCCAAGGAACATTCTATTTGTATTTTTCATCT 150
|.||||||||.||.|||||.|||||.||.||.|||.|.|||||.|||||.
BL03219___yvd 101 TGAAAAAGGCGGGTACTGCGCAAGGCACTTTTTATCTTTATTTCTCATCC 150
BSNT_05208___ 151 AAAAATGCCCTCATACCGGCCATTGCAGAAAATCTTCTCACCCATACACT 200
||||||||.||.||.||.||.||.||.|||||||||||.||.|||.|..|
BL03219___yvd 151 AAAAATGCGCTGATTCCAGCGATCGCGGAAAATCTTCTGACACATTCTTT 200
BSNT_05208___ 201 TGATCAAATCA-----AAGGTAGGCTGCATGGGGACGAAG-ATTTTTGGA 244
.||.||.||.| |||||.|.| ||.||.|.| .|||.||||
BL03219___yvd 201 GGACCATATTAAGAGCAAGGTCGAC------GGAACCATGTCTTTCTGGA 244
BSNT_05208___ 245 CCGTTTTAGATATATTAATTGATGAGACATTTCTCATTACAGAACGCCAT 294
|||..||.|||||..|.||.||||||||.||...|||.||.||||..|||
BL03219___yvd 245 CCGCCTTGGATATCATGATCGATGAGACGTTCAACATGACGGAACTTCAT 294
BSNT_05208___ 295 AAGGATATTATTGTCCTCTGTTATTCCGGGCTTGCGATCGACCACTCCAT 344
.||||||||||.||.||.||.||.||.||.|||||..|.|||||.||.||
BL03219___yvd 295 CAGGATATTATCGTTCTTTGCTACTCAGGTCTTGCCTTTGACCATTCGAT 344
BSNT_05208___ 345 GGAAAAATGGGAGACGATCTATCAGCCTTATTATTCCTGGCTTGAACAAA 394
|||||||||||||.|.||||||||||||||||||||||||||||||..|.
BL03219___yvd 345 GGAAAAATGGGAGGCAATCTATCAGCCTTATTATTCCTGGCTTGAAGGAC 394
BSNT_05208___ 395 TCATCAACAAGGCCATTGCAAACCATGAGGTAA---CGGAAGGCATCAAT 441
|.||..|.||.||..|||..||..|.|||||.| ||| |.||
BL03219___yvd 395 TTATTGAAAAAGCAGTTGAGAAAAACGAGGTCATTCCGG-------CCAT 437
BSNT_05208___ 442 TCAAAA-------TGGACGGCCAGAACGATTATCAACTTGGTCGAGAATA 484
| || |||||||||.||||||||||||||||.|||||.||.|
BL03219___yvd 438 T---AATGTGCGCTGGACGGCCCGAACGATTATCAACTTTGTCGAAAACA 484
BSNT_05208___ 485 CTGCGGAACGATTCTATATCGGATTTGAACAAGATGAAAATGTTGA---- 530
|.||||||||.|..||.|||||....|||.|.||.||| ||
BL03219___yvd 485 CAGCGGAACGTTATTACATCGGGGCGGAAAACGACGAA------GAGCTC 528
BSNT_05208___ 531 AGTGTAT--AAAAAGGAAATTTTCAC-TTTCTTAAAACGGAGCTTAGGCA 577
|||||.| |||||.|||||.||.|| |||||.||.| |.|||.||||.|
BL03219___yvd 529 AGTGTGTTCAAAAAAGAAATATTTACTTTTCTGAAGA-GAAGCATAGGAA 577
BSNT_05208___ 578 CTGCTTAA 585
|....|||
BL03219___yvd 578 CCAAGTAA 585
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